Kocuria rhizophila: KRH_03520
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Entry
KRH_03520 CDS
T00701
Symbol
fadD
Name
(GenBank) long-chain fatty-acid--CoA ligase
KO
K01897
long-chain-fatty-acid---CoA ligase [EC:
6.2.1.3
]
Organism
krh
Kocuria rhizophila
Pathway
krh00061
Fatty acid biosynthesis
krh00071
Fatty acid degradation
krh01100
Metabolic pathways
krh01212
Fatty acid metabolism
krh02024
Quorum sensing
krh04146
Peroxisome
Module
krh_M00086
beta-Oxidation, acyl-CoA synthesis
Brite
KEGG Orthology (KO) [BR:
krh00001
]
09100 Metabolism
09103 Lipid metabolism
00061 Fatty acid biosynthesis
KRH_03520 (fadD)
00071 Fatty acid degradation
KRH_03520 (fadD)
09140 Cellular Processes
09141 Transport and catabolism
04146 Peroxisome
KRH_03520 (fadD)
09145 Cellular community - prokaryotes
02024 Quorum sensing
KRH_03520 (fadD)
09180 Brite Hierarchies
09181 Protein families: metabolism
01004 Lipid biosynthesis proteins [BR:
krh01004
]
KRH_03520 (fadD)
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
krh04147
]
KRH_03520 (fadD)
Enzymes [BR:
krh01000
]
6. Ligases
6.2 Forming carbon-sulfur bonds
6.2.1 Acid-thiol ligases
6.2.1.3 long-chain-fatty-acid---CoA ligase
KRH_03520 (fadD)
Lipid biosynthesis proteins [BR:
krh01004
]
Acyl-CoA ligase
Long/very long chain acyl-CoA ligase
KRH_03520 (fadD)
Exosome [BR:
krh04147
]
Exosomal proteins
Exosomal proteins of breast milk
KRH_03520 (fadD)
Exosomal proteins of breast cancer cells
KRH_03520 (fadD)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
AMP-binding
AMP-binding_C
Motif
Other DBs
NCBI-ProteinID:
BAG28699
UniProt:
B2GFX5
LinkDB
All DBs
Position
388413..390122
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AA seq
569 aa
AA seq
DB search
MADVNSRDFLATRPWTASYDPGVPRDLDLPETSLVHMLEKSVARHGAKTAVEFFGAGTTY
AQLGDQVQRVAEGLRVLGVQAGDRVAIVLPNCPQHIVAFYAVLRLGAIVVEHNPLYTTPE
LRHQFEDHGARVVIAWDKVASRITSMPQDLAVEHVVAVDITTAMPAPMRLGLRLPLKKLA
AQRRELTGAAPGTISWASLLDSTPLRADHPRPTATDTALLQYTSGTTGLPKGAMLSHRNL
ESNALMGQHWLDSSSNEVVYGVLPLFHAFGLTLGLTFAMSLGAKLVLFPTVRADLILRAM
KKSMPTVLPAVPPVYQKVLDAAEEQGKDLTGVRVAVSGAMSLPVPLVATWEDATGGMLIE
GYGLTECSPLVACNPLNEHRRAGSIGVPFPSTDIRMVDPETGEDVPVDAEGELLVKGPQT
TQGYWKRPEETAKLFTEDGWLRSGDIVTVDQDGFLRVVDRIKEVIITGGFNVAPTEVETA
LKLHDSVADAAVVGIPNDDGNETVVAAVVLEPGVTLDEAALRQHCYDKVTRYKVPRRIIA
MDDLPRTMLGKTLRRAVKEEILSQDLLKG
NT seq
1710 nt
NT seq
+upstream
nt +downstream
nt
atggctgacgtgaattcccgtgacttcctggcgacccgaccctggacggcgagctacgac
cccggggtcccgcgggacctggacctgcctgagacgtccctggtgcacatgctcgagaag
tccgtggcccgtcacggcgccaagaccgccgtggagttcttcggcgcgggcaccacctac
gcgcagctgggggaccaggtccagcgcgtggccgaggggctgcgcgtgctgggggtgcag
gccggtgaccgcgtggcgatcgtgctgcccaactgcccgcagcacatcgtggcgttctac
gcggtgctgcgcctgggagcgatcgtggtggagcacaacccgctctacaccaccccggag
ctgcggcaccagttcgaggaccacggtgcccgcgtggtgatcgcgtgggacaaggtggcc
tcgcggatcacgagcatgccccaggatctcgccgtggagcacgtggtggccgtggacatc
accaccgcgatgcccgcccccatgcgcctcgggctgcggctgccactcaagaagctcgcc
gcccagcgccgcgagctcaccggcgccgcacccggcaccatctcgtgggcctccctgctg
gactcgacgccgctgcgcgcggaccacccgcgccccaccgccacggacaccgccctgctg
cagtacacgtccgggaccacgggcctgcccaagggggcgatgctcagccaccggaacctg
gagtccaacgccctgatgggtcagcactggctggacagctcctccaacgaggtggtctac
ggcgtgctcccactgttccacgccttcgggctcacgctcgggctgaccttcgccatgtcc
ctgggggccaagctggtgctgttccccacggtgcgcgcggacctgatcctgcgggccatg
aagaagagcatgcccaccgtgctgcccgcggtcccgccggtctaccagaaggtgctcgac
gccgccgaggagcagggcaaggacctcaccggggtccgggtggcggtctccggcgccatg
agtctgcctgtccccctggtcgccacgtgggaggatgccacgggaggcatgctgatcgag
ggctatgggctgaccgagtgctcccccctggtcgcgtgcaaccccctcaacgagcaccgc
cgcgcggggtcgatcggcgtccccttccccagcaccgacatccgcatggtggatcccgag
accggcgaggacgtgcccgtggacgccgagggcgagctgctggtcaagggcccgcagacc
acccagggctactggaagcgcccggaggagaccgccaagctgttcacggaggacggctgg
ctgcgctcgggcgacatcgtgaccgtggaccaggacggtttcctgcgcgtggtggaccgg
atcaaggaggtcatcatcacgggcgggttcaacgtggcgcccaccgaggtggagaccgcc
ctgaagctgcacgacagcgtggccgacgccgccgtggtggggatacccaacgacgacggc
aacgagaccgtggtggccgccgtggtgctggagcccggggtgaccctcgacgaggccgcc
ctgcgccagcactgctacgacaaggtcacccgctacaaggtcccgcggcggatcatcgcc
atggacgacctcccccgcacgatgctcggcaagaccctgcgtcgcgccgtcaaggaggag
atcctgtcccaggacttgctcaagggctga
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