Kwoniella shivajii: 87955971
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Entry
87955971 CDS
T10982
Symbol
IL334_003840
Name
(RefSeq) protein transporter SEC24
KO
K14007
protein transport protein SEC24
Organism
ksh Kwoniella shivajii
Pathway
ksh04141
Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:
ksh00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
04141 Protein processing in endoplasmic reticulum
87955971 (IL334_003840)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
04131 Membrane trafficking [BR:
ksh04131
]
87955971 (IL334_003840)
Membrane trafficking [BR:
ksh04131
]
Endoplasmic reticulum (ER) - Golgi transport
Forward pathways
Coat protein complex II (COP-II)
87955971 (IL334_003840)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sec23_trunk
Sec23_helical
Sec23_BS
zf-Sec23_Sec24
WW
Gelsolin
Vps36-NZF-N
Motif
Other DBs
NCBI-GeneID:
87955971
NCBI-ProteinID:
XP_062791617
LinkDB
All DBs
Position
5:join(215643..215686,215753..215784,215844..218635,218720..218734)
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AA seq
960 aa
AA seq
DB search
MSQEVMLPQGWEARWDAQSNAYVYVEQSTGRSQWEVPTQPSYGSSHPSTSPAPTPAAAPS
QGQSHRPGRRQYPTAQIQQVYGGGGYDTQPQQSLAAPGYPDQNASQQPQYFTPGLGGADA
HQPSHGQQPAASPYGGAAPAQSQQPGYGQQQSAYGSQQQQQQPVDQMSNQFQQMNMGYQG
GAGAGAGMSGQKQLHQIQTVNLIGMQPDVTGLDTPPPPYLLPPNASVTASPHIQPDPSYQ
RCTLTSMPTTQSLLNKSKLPLALVMAPYRSFRESDGEDPVPVIEDSVIARCRRCRAYINP
FVTFIEGGNRWKCCMCGLSNEVPQLFDWNQVENKPADRWARKELNHSVVEFIAPTEYMVR
PPQPPVYAFVIDVSQQAVQSGMVAVAARTILESLDNIPNADSRTKVAIIAVSTSLHFFSL
PAGATEASMLVVSDLSDVFLPKPVDLLVNLTESRPALESLLGRLSDMFQDSHVVGNALGS
ALQAAHQLIGKIGGKIIALTATLPTLGEGALKARDDPKLLGTSKESSLLNAASSFYKTFA
IECSKQQVAVDMFLFSTSYTDVATLSCLPRYTAGQTYLYPGFNASRSEDAIKFATEFGKV
LAMPIGLEAVIRVRATRGIRMSAFHGNFFIRSTDLLALPVVPTDQNYVIELQLEDDIKGS
FVVLQTAILHTTCYGERRIRVITQAMPTTDSIPELYASADQVAIATYLTNKAVERSMSHS
LDDARNTVTNKLGEMLGVYKNQVTSSSGASAQLAVPENLKLLPLLCCGLVKHVGLREGSS
IPPDLRSYAQALLTTLPCQSLVPFIHPRFYSLHNMSPEAGNIGDAGIVLPQALNLTSERL
ERHGLFLIEDGQNIFIWVGHEAVPRLIQDVFDLPSYGELQGGKYTLPVLDNPFSQRVNNI
VAKTRELRRGVYRPHVYVVKSDAEPALRSWALSLLIEDRMDHMSSYAQYLTTVKNKVNGS
NT seq
2883 nt
NT seq
+upstream
nt +downstream
nt
atgtctcaagaagtgatgctccctcaagggtgggaagctaggtgggatgcgcaatcgaac
gcttatgtctatgtcgagcaatctaccggccgatcgcaatgggaagtgccaactcaacct
tcttacggttcgtctcacccttccacctctcctgctcctactcctgccgctgcaccttct
caaggacaatctcaccgacctggacgtcgacaataccctaccgctcagattcaacaggta
tatggaggtggtggatatgatactcaacctcagcagtcattagctgctccaggatatcct
gatcaaaacgcatctcagcaacctcaatattttactcccgggcttggaggagcagatgct
catcaaccatctcatggtcaacaacccgctgcttctccttatggaggtgcagcacctgct
cagagtcaacaacctggatacggtcaacaacaatctgcttatggaagtcaacaacaacaa
caacaacctgtagaccaaatgtcaaatcaattccaacagatgaacatgggctatcaaggt
ggtgcaggtgctggcgcaggaatgtcaggacagaaacaattacatcaaattcaaaccgtt
aatctaataggtatgcagcctgatgtaacaggtctagatacgcctccaccaccctatctc
ttacctcccaacgcatcagtcactgcttcacctcacatccagccagacccatcgtatcaa
cgatgtacgctcacttccatgcccactactcaatcattactcaataaatcaaaattacca
ttagcattagtgatggctccttatcgatctttcagggaatcagatggagaagatccagtt
ccggtcatagaagatagtgtaattgcaagatgtagaagatgtagagcatacatcaatccc
tttgtcactttcattgaaggtggcaacagatggaaatgttgtatgtgtggattaagtaat
gaagtaccacaattattcgattggaatcaagttgaaaacaaacctgctgatagatgggca
aggaaagaattgaatcattcagtagtagagtttattgctcctacagaatatatggttagg
ccacctcaaccacctgtatacgctttcgtcattgacgtatctcaacaagctgttcaatcc
ggcatggtagctgtcgccgctagaacaatcttagaaagtctcgataacattccaaatgcc
gacagtagaaccaaagtcgcaatcatagcagtttctacatctctacatttcttttctttg
cccgcaggcgccacagaagcttcgatgttggtcgtatcagatctttcggatgtgttttta
ccgaaaccagtagacttacttgtcaaccttaccgaatcccgtccggccctcgaatccctt
cttggtagattgagcgatatgttccaagattctcacgttgttggcaacgcgcttggatcg
gctcttcaagccgctcatcaactcattggtaagatagggggaaagatcatcgctcttact
gctacactaccaaccctaggtgaaggtgcattgaaggctcgtgacgaccctaaacttctc
ggaacaagcaaagaatcttctctactcaacgccgcttcaagcttttacaagactttcgcc
atcgaatgctcaaaacaacaagtggcggtcgatatgttccttttctcaacttcttatacc
gatgtagcgaccttatcttgtctaccaagatacacagctggacaaacatatctgtatccc
ggattcaatgcatcaagatccgaagatgccatcaaattcgccactgaattcggtaaggta
ttagctatgccaatcggcttagaagctgttattcgagttcgagccaccagaggaatcaga
atgagtgctttccatggtaatttctttatccgatcgaccgatttactcgctctaccagtt
gttcctacggatcaaaactatgtcattgaattacaacttgaagatgacatcaaaggatca
ttcgttgttcttcaaactgctattctacatacgacatgctatggtgaaaggcgaataaga
gttattactcaagctatgccaacgaccgattcaattccggaactatacgcctcagctgat
caagttgcaatcgccacttaccttacgaataaagcggttgaacgatcaatgtctcattca
ctcgatgatgctaggaatacagtgaccaacaaattaggtgaaatgttaggtgtatataag
aaccaagtcacatcgtcatctggagcttcagcacaactggctgtacctgaaaacttgaaa
ttgttacctttactgtgttgtgggctagtcaaacatgtgggattaagagaaggatcaagt
atacctcctgatttaagatcttacgctcaagcgttattgactactctaccctgtcagtca
ttagtaccatttatccacccaagattctattcattacataacatgtctcccgaagctgga
aacataggagacgcaggaatcgttctcccgcaggcattaaacctaacttcggagagatta
gaaagacatggattgttcttaatcgaagatggtcaaaatattttcatttgggtaggacac
gaagccgtaccacgactgattcaagatgtctttgaccttccttcatatggtgaattgcaa
ggcggtaaatatactttaccagtattggataatccattctctcaaagagtgaataacata
gttgctaaaactagagaattaaggagaggtgtatataggcctcatgtctatgttgttaaa
tctgacgcagaaccagctttaagatcttgggcgttaagtctgttgattgaagatagaatg
gatcatatgagtagttatgctcaatatttaaccacggtcaagaacaaggtaaacggtagt
taa
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