Kwoniella shandongensis: 43585303
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Entry
43585303 CDS
T11156
Symbol
CI109_102811
Name
(RefSeq) uncharacterized protein
KO
K12600
superkiller protein 3
Organism
ksn Kwoniella shandongensis
Pathway
ksn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ksn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
43585303 (CI109_102811)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ksn03019
]
43585303 (CI109_102811)
Messenger RNA biogenesis [BR:
ksn03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
43585303 (CI109_102811)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_17
TPR_2
TPR_1
TPR_19
TPR_12
TPR_8
TPR_CcmH_CycH
TPR_16
TPR_14
TPR_9
TPR_11
ANAPC3
TPR_6
TPR_7
Iml2-TPR_39
HrpB1_HrpK
DUF6584
TPR_5
Motif
Other DBs
NCBI-GeneID:
43585303
NCBI-ProteinID:
XP_031864092
UniProt:
A0A5M6C7W9
LinkDB
All DBs
Position
5:join(324120..324250,324315..324372,324435..324571,324621..324696,324756..325210,325269..325528,325581..325903,325963..326120,326170..326585,326642..327009,327062..327982,328037..328246,328303..328913,328978..329500)
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AA seq
1548 aa
AA seq
DB search
MATVKKSLKSIKLHLENKESESALYEATNLLKSIDEKAPEAAQVLAFRGLALTQLERFDE
AKKSYVHLYRLQPTHPLAAVGLKKLYEKLESWEELGAFLEVLIQTACDDGDAEKCTSYLQ
ELVELRVKHGPEDRLYRALDLLLPSSPLVPLLQSLPLPAGAYVPFPGPIYPPASAAVLPT
LPTAIPHVQHLVGSLPLLLFLLVRVESLVYTSTEAKVKAGRSRLNAGGEKEVRRKVDAEV
LGGELGMRMVDLLREVGNHPGVTDVVRREVEVREFNFWRKLVASLGRDDKPGHKSQQPPV
LKQTPSSSKQAVSSGLPIPTLFQPAEYPKPSKQEALQRADGLANGFILLELSGKGAEEGW
AWVLEGKDEPTIFYDLELLHKYAKTFPESTMTYLIDDYCRWFKLPLPEPEEEEEEVQASE
SADGTDSAKPKPTKKYRAKKGKAGQNARERRKARRAAGKDGLLAEDIDQEERDELVTSMT
KFADKLTKSIFAHRVLARISVQEEDWANAVAFAEKGRLLAKEVESERGISLPNVKASLDT
VLGVALVPYFAPKHHTRATRLLTGVLKEYPDNSEARFARAQIYQAAGKWSEARKLFQMLL
EAGGDEKDVVAAKEELAWCLVNEGKLEKGRDLLESVVETRDARAEQEGKDDEAYQRARAW
WRLGQTEWMIGDDESRQHAEDWFMASIRALPTYASAYTALGICYSSATPPDEDRASKCFQ
KAFELDATEAEAARRLAFVYANEDEWALVRSIATRVMEGEGGLDGVAGGEAMNPKGRFAP
QNGWAWKALGSTEVHYKNYAKAAQAYQIALRAEPDDISTWVMLGESYVKCGRHVAGLKAL
QHAMELEPTNWRALYDIGETHGQLGAFDKAIEAYEQVMEMTEGKEIGVVAALSEAMLSLG
RQTGAGGFRERSRNAFHMAIKLAFEVLQTGRSHRPWAWKVIGDATFELSSQESSLEEASS
TFEYIQPVLQHLVEDDTDRRSQVEGLGHAANLLQAAADLDYTLKTSIFAFAYRAHLLKNE
PRVADPALYDLATALHTLALRLSDGESKIACLKAAISAVRLALERDAGDERLWNALGVIC
GTAGPQIAQHAFVVSLELYGKDPVVWANLGYLYFRLDDSDLANQCFLKAQIIDPDYARAW
FGQGLLAERYGDKDHAKALFSHSVTLSAGSLLEADLALAVSTFERFLSPNEHISTALLHQ
PAFALRHYCHQRPRDCAAAHLYALICERLGLIDEAASSLERAAVVLEEEFEHNESIEIEI
RYATALCNLGRVQLAAGKYQQSLDGLINCWELISGSSDGSITSLKVQCRLLQGLAHYWLG
QVEESLEAFQASLDEATAAQDMWVKEEVAVLLSRTLWGLGGEDAKETAKSNLMECLSQEK
PSLKVISTMAAIAVVASDEDLIDAALSELLSRPLEARVKEDSSGQSDLVLYYHAISEGRI
DEGNTILESAVRAKPDSSISRNRLAEALLKADRATEAIGVLSTTVGKEDDVEIVAKSERL
RGVAEALDGDEAGTKRVQRSAMLAPWEQESWEALAWGRKVVAEADVEA
NT seq
4647 nt
NT seq
+upstream
nt +downstream
nt
atggcgacggtcaaaaagtcattgaaatcaatcaagttgcatttggagaacaaggaatcg
gaatctgcactttatgaagctacaaacttgctcaagtcgatagatgagaaagctccagaa
gcggcgcaagtcttggcctttcgagggttagctcttacacaactagaacgtttcgatgaa
gcgaagaaatcatacgtccatctttaccgcttacaaccaacacatccactggctgccgtt
gggctcaaaaagttatacgagaagctagagagctgggaagagcttggcgccttcctggaa
gtgctcattcagacggcgtgcgacgatggcgatgctgagaagtgcacgtcatacttgcaa
gaactcgtagaactccgagtcaagcatggccctgaagatcgattataccgagcgctagat
ctacttctgccttcatcacctcttgtgcctctcttgcaatcacttcctctgcctgccggg
gcgtatgtccctttcccaggtcctatctatcctccagcatcagcagctgtccttcctaca
ctacccacagccatccctcacgttcaacatctcgttggttccctaccgctcttactgttc
cttctcgtgcgtgtcgagtctctagtctacaccagtaccgaggcgaaggtgaaagctgga
cgatcgagacttaatgcaggtggagaaaaggaagtcagacggaaagtggacgctgaggtt
cttggtggagagttaggtatgcgaatggtagacctgctacgagaagttgggaatcacccc
ggtgtgacagacgtggtgagaagggaagtggaggttagggaattcaacttttggcggaag
ctcgtggccagccttggacgtgacgacaaaccgggtcataaaagtcaacaaccgccagtc
ctcaaacagaccccttcatcgtcaaagcaagctgtttcgtccggacttcccattccaaca
ctattccagcctgcagagtacccgaagccgtctaagcaagaggctttacagcgcgcggac
ggtctcgcgaatggctttatccttctcgaactttcgggtaaaggtgctgaggaaggttgg
gcttgggtgttggaaggcaaggatgaaccgactatattctacgatcttgaactgctgcac
aaatacgctaagacattccccgagtccacgatgacatatcttatcgatgattactgccgt
tggttcaagctgccacttccggaacctgaagaagaagaagaagaagtgcaggcgtctgag
tcggcggacgggacggattcggccaaaccaaaaccgacgaagaaatatcgagcaaagaaa
gggaaagccggtcagaatgcccgagagcgtcgtaaagcccgacgagccgctggaaaggat
gggttgttggccgaagatatcgaccaagaggaaagagacgagctagtcacctccatgacc
aaattcgcggacaaattgacgaaatcgatctttgctcaccgcgttctggcgaggatatcc
gtacaagaagaggactgggctaatgcagtcgcctttgctgagaaaggtcgcttgttggca
aaggaagtggagtccgaacgaggtatctcacttcccaatgtgaaggcttccttggatacc
gttctaggtgtggcattggtgccatactttgcgccaaaacaccatacgcgagccactcgt
ctcctcaccggtgttctcaaagagtatcccgataactcagaagccagattcgccagagct
cagatctatcaagctgctggcaaatggtcggaggcgaggaaattgttccagatgttgctc
gaggcgggtggagacgagaaggatgtggtagctgcaaaggaagaactcgcttggtgtctc
gtcaatgagggcaagctggagaaaggaagagacttgctggagagtgttgtggagactagg
gatgcgcgagcggagcaggaaggcaaagacgacgaagcgtaccagcgagcgagagcttgg
tggcgtttgggtcagacagagtggatgatcggagatgatgaaagtcgacagcacgcagag
gattggttcatggcatccatcagagcgcttccgacatacgcctctgcttacaccgccctt
ggtatttgctattcctctgcgacaccgcccgacgaagaccgagcgtccaaatgcttccaa
aaagcgttcgagctcgatgccaccgaggcggaagcggccagacgactggcattcgtgtat
gcgaatgaggatgaatgggctttggtacgctccatcgccaccagggttatggagggagaa
ggtggtcttgacggtgtagctggaggggaagcaatgaaccccaaggggcgattcgcgcct
caaaacggatgggcttggaaggctttgggatcgaccgaagtccattacaagaattatgcg
aaagcagcacaagcttatcaaattgctttgcgcgctgagccggacgatatctcgacatgg
gtcatgcttggagagtcctacgtcaagtgcggccgtcacgttgcgggtctgaaagcgtta
cagcacgctatggagcttgaacctaccaattggagagcgctgtacgatatcggtgaaaca
cacggacaactcggtgcattcgacaaagccatcgaggcatacgagcaagtgatggagatg
actgaaggcaaagagattggcgtggtcgcggctctatcggaagcgatgttgtccttaggt
aggcaaactggtgcgggtggatttagagagcgatcgaggaacgcctttcacatggcgatc
aaactcgcttttgaggtattgcaaacagggcgaagccatcgaccttgggcgtggaaagtg
atcggcgatgcgactttcgaactcagttctcaagaatcgagtctggaagaagctagttcg
accttcgagtacatccagcccgttttgcaacaccttgtcgaagacgacaccgatcgtcga
tctcaggtcgagggactaggacatgctgccaatctactgcaggcagctgcggatcttgac
tacacgttgaagacgtccatcttcgccttcgcctaccgagcacatctgctgaagaatgag
ccaagagttgcggatccagcattgtatgaccttgcgacagctctgcacacccttgccttg
aggttgagtgatggcgaaagcaagattgcttgtttgaaagctgcaatctcggcagttcgg
cttgctttggagagagatgcgggagatgagagactgtggaacgcccttggtgtgatctgt
gggacagccggacctcaaattgctcaacacgccttcgttgtttcccttgagctgtacggc
aaagaccctgttgtgtgggccaacttagggtatctctacttccgcttggacgacagcgat
ctcgcaaaccagtgtttccttaaagcccagatcattgatcccgactatgctcgagcttgg
ttcggacaaggactactcgcagagagatacggggacaaagaccacgcgaaggcgttattc
tcacattctgtcactctttccgcgggatctctgttggaagcggacttggcactcgctgta
tctacgtttgagcgattcctctcgcccaacgaacatatctctaccgcgctgctgcaccaa
ccagcatttgctttgcgacattattgccatcaacgcccgcgcgactgtgcggcagcccat
ttgtacgctctgatctgcgagcgccttggcttgatagacgaagctgcgtcgtcgctcgag
cgtgcagctgtcgtattggaggaggagttcgagcataacgaatccattgagatcgaaata
cgatacgctaccgcattatgcaatctcggccgagttcagcttgcagcagggaagtatcaa
cagagtctggacggactcatcaactgctgggagctcatttctggttcctcggatggttct
atcacctcgttgaaggtccaatgtcgactcttacaggggctcgcacattactggctagga
caggtcgaagaatctctcgaggcgttccaggcaagtctggacgaagcgactgccgcgcag
gatatgtgggtcaaagaggaggtcgctgttctactcagcaggacactctggggtctcggt
ggtgaagatgccaaagaaacggcaaagagtaacctaatggagtgcttgtcacaagagaaa
ccatcattgaaggtcatctctacaatggcggcaattgcagttgtagcatcggacgaagac
ctcatcgacgccgctctttctgagcttttgtctcgtccgctcgaagcgagagtcaaggaa
gactcatctggtcaatccgacctcgttctgtactaccacgccatctccgaaggtcgtatc
gacgaagggaacaccattctggaaagtgcagtccgagcgaaacctgatagctcgatatcc
agaaacagactagcagaagcgcttctcaaagcggaccgagcgaccgaagcgatcggcgtt
ctttcaacgacggtcgggaaagaagatgatgtggagattgtagccaaatcggagagattg
agaggtgttgcagaggctctcgatggggatgaagcgggcacgaagagggtacagaggagc
gcgatgttggctccttgggaacaggagtcctgggaggctttagcttggggaaggaaggtt
gtagcggaggcagatgtagaggcgtga
DBGET
integrated database retrieval system
