Kwoniella shandongensis: 43587370
Help
Entry
43587370 CDS
T11156
Symbol
CI109_105228
Name
(RefSeq) pre-mRNA-splicing factor CLF1
KO
K12869
crooked neck
Organism
ksn Kwoniella shandongensis
Pathway
ksn03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
ksn00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
43587370 (CI109_105228)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
ksn03041
]
43587370 (CI109_105228)
03036 Chromosome and associated proteins [BR:
ksn03036
]
43587370 (CI109_105228)
Spliceosome [BR:
ksn03041
]
Complex B
Other components
Prp19-related factors
43587370 (CI109_105228)
Complex C
43587370 (CI109_105228)
Chromosome and associated proteins [BR:
ksn03036
]
Eukaryotic type
Centrosome formation proteins
Centrosome duplication proteins
Other centrosome duplication proteins
43587370 (CI109_105228)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HAT_Syf1_CNRKL1_N
HAT_PRP39_C
HAT_PRP39_N
HAT_Syf1_CNRKL1_C
TPR_14
HAT
Suf
TPR_19
TPR_2
HAT_Syf1_M
TPR_CcmH_CycH
Mad3_BUB1_I
SNAP
TPR_16
U3_assoc_6
Motif
Other DBs
NCBI-GeneID:
43587370
NCBI-ProteinID:
XP_065823689
UniProt:
A0AAJ8LMW8
LinkDB
All DBs
Position
9:complement(join(857103..857326,857392..857533,857582..857965,858020..858199,858251..858366,858415..858666,858719..858751,858803..858842,858894..859039,859091..859334,859394..859596,859650..859812,859887..859952))
Genome browser
AA seq
730 aa
AA seq
DB search
MSGRDARDRAPRVKNRAAAAVQITAEQLLREAQERQEPAIQAPRQRVQDLEELSEFQGRK
RTEFEGRIRYSRDSIRAWIKYAQWEASQNEFDRSRSIYERALDVDPRSVELWLKYTDMEL
KARNINHARNLFDRAVTLLPRVDALWYKYVYLEELLLNVPGARQIFERWMQWEPNDKAWQ
SYIKLEERYNELDRASAIYERWIGCRPIPKNWVTWAKFEEERAQPDKAREVFQTALEFFG
DEEEQVEKAQAVFAAFARMETRLKEFERARVIYKFALARLPRSKSASLYSAYTKFEKQHG
DRAGVELTVLGKRRIQYEEELAYDGTNYDAWFSLARLEEDAYRADKEDGEDVEPTRVREV
YERAVANVPPALEKRYWRRYIYLWLQYAAFEEIDTKDYDRARDVYKAAVKLVPHKTFTFA
KLWLAYAYFEIRRLDVTAARKVLGAGIGMCPKPKLFTGYIELEMRLREFDRVRTLYEKFL
TYDPSLSSAWIQWTQVESAVEDFERVRAIFELAVQQALDMPEIVWKAYIDFEAGEGEREK
TRNLYERLLERTSHVKVYVSYALMEVSVLGGGEDEDGNEIEGEAGDPELARAVFARGYKD
LRERAEKEDRALLLEAWKSFEQQHGTEEELAKVEEMMPTTRKRWRKADDGSGALEEYWDL
IFPDDERDANPTSFKFFQAAQAWAAQRQGDGEDGGLSYDLPSDSDEDEDEADEADEKGDE
GEAEAMDQDE
NT seq
2193 nt
NT seq
+upstream
nt +downstream
nt
atgtcgggtcgagatgctcgcgatcgcgctccacgagtgaagaaccgtgctgcggccgcg
gtacagattaccgccgagcaacttctccgagaagctcaagagcgacaggaacccgctatc
caagcgcctagacagcgagtacaggacttagaagagctttcagaattccaagggaggaag
agaacggagttcgagggaagaatcagatattctcgagatagtattcgagcttggatcaaa
tacgctcaatgggaagctagtcaaaatgagtttgatcgatctcggtcgatctacgagaga
gcgttggatgtggatcccagatcggtcgagctctggctgaagtacaccgatatggagctg
aaggcgaggaatatcaaccatgctcgaaatctgtttgatcgtgctgtcactcttctacct
cgtgtcgatgctctgtggtacaaatacgtctacctagaagaactccttcttaacgttcct
ggcgctcgacagatcttcgaaagatggatgcaatgggagccgaatgacaaagcatggcag
agttacatcaagctggaagagagatataacgagctggatagggcttcggctatatacgag
aggtggattggatgtcgacccatcccgaagaactgggtgacttgggcgaagtttgaggag
gaaagggcgcaacctgacaaagctcgagaggtgttccagacagcactcgagttctttgga
gatgaggaggagcaagtggagaaagcccaagctgtgtttgcggcttttgctaggatggag
acacggttaaaggaatttgagcgagctcgagtgatctacaagtttgctcttgctcgtctt
cctcgatcaaaatcagcgagcttatactcggcctacaccaagttcgaaaagcaacatggc
gaccgtgctggtgtcgaactcaccgttcttggaaagcgaagaatacagtatgaggaagaa
ctagcgtacgatgggacaaactacgatgcttggttctcattagcaagattagaagaggat
gcgtaccgagccgacaaggaggatggagaagatgttgagcctacaagagtacgagaggtg
tatgagagagcagtggccaacgtccctcccgcactggaaaagcgatactggagaagatac
atatatctctggttacaatacgccgcatttgaggaaatcgacacgaaggactacgaccgt
gcacgagacgtctacaaggctgcagtcaaactcgtcccccacaaaactttcacgttcgcc
aagctctggctcgcatacgcctacttcgagatccgacggctggacgttactgctgccaga
aaggtgctcggtgctggtattggaatgtgccccaagcctaaactgtttaccggctacatt
gagttggagatgaggttacgagagttcgatcgagtgagaacattatacgagaaattcttg
acatacgacccctccctcagttctgcctggatccagtggacgcaagtcgaaagtgccgtc
gaagacttcgagcgtgtacgagccatcttcgagcttgctgtgcaacaagctttggacatg
cccgagatcgtctggaaagcatacatcgacttcgaggctggcgaaggagaacgagagaag
actcgaaacctctacgagcgattgttggaacgaacatcacatgtcaaggtgtacgtctcc
tacgcgctcatggaggtctccgttctgggtggtggagaagacgaggatgggaacgagatc
gagggagaagctggagatccggaactggccagagctgtgtttgcaagaggatacaaagat
ctgcgggagagagcggagaaggaagaccgagcattgcttctcgaggcctggaagtcgttc
gagcaacaacacggtacggaggaggagctggcgaaggtggaggagatgatgcctactact
cgaaagagatggcgcaaggccgacgatggcagcggtgcactggaagagtactgggacctc
attttccccgacgacgagagggatgcgaaccctacatcgttcaaattcttccaggctgct
caagcttgggctgcgcagagacaaggcgacggagaagatggtggtctgtcatacgatctg
ccatcagattcggacgaagacgaggacgaggccgacgaggctgacgagaagggagacgag
ggggaagcagaagccatggaccaggacgagtaa
DBGET
integrated database retrieval system
