Kwoniella shandongensis: 43591132
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Entry
43591132 CDS
T11156
Symbol
CI109_102544
Name
(RefSeq) uncharacterized protein
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
ksn Kwoniella shandongensis
Pathway
ksn03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
ksn00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
43591132 (CI109_102544)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
ksn03019
]
43591132 (CI109_102544)
Messenger RNA biogenesis [BR:
ksn03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
43591132 (CI109_102544)
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
43591132 (CI109_102544)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
DUF3819
CNOT1_TTP_bind
CNOT1_HEAT
ARM_Cnot1
NOT1_connector
Exo_endo_phos
Motif
Other DBs
NCBI-GeneID:
43591132
NCBI-ProteinID:
XP_065823228
UniProt:
A0AAJ8LIW2
LinkDB
All DBs
Position
4:complement(join(1395714..1396045,1396097..1397657,1397710..1400655,1400705..1401493,1401612..1402514,1402570..1402836))
Genome browser
AA seq
2265 aa
AA seq
DB search
MSIPPPGLGGGVSRTGPPPGFAAAANNHSPSTDVASNGPGVAMGGAGSGGGGRRDGQGGT
AVIVRAQIVFLLTTFTEDSFDKASNEIRTLASGNGPEMYHHFLRRAVVVANPILQTLIQH
SQQYKDDPAAPPPQIPTTGQAALVWRLLVTEAIRAARDVQLAPHFSLIMLSPSPSTPLPL
PSLRLFNLPPALLFSLSAYTLASPHVFPPTHASFAVFHAILAQGFQPTMELLRSPNVPFW
TMNAIPGREPYTDDLTLQEARTLILALFPRSSTSSNGGNASRPATPTNPTPPHSSPLNTI
QRATLLASLTVKFSSPAIILQTLSALSPGGPPRTPGSIPLEEILFELGETLTQDEGTVEA
VVGRWWGPWLLEGLSPEEQKRQTTEEACRVESISWPDVIRSFDTPVSIAAYPTSIPLLIC
LICLPPQSPTPPLAGLLPATIDSPSWDHMASLLSILSHLTTLAPDIMPIFTMPTAPSPSS
YARIVDPPSSEQVWSKLARQQARDLQGAGLWNTLGLIQVLVHAFGLAEVDHPSEREREER
AEIGRRASNILDKAYQLAPELVLIALEKLPVSLTYQVLADMQKPLPAPIHNMHIRLLSRY
LAASPANEMTSSSLVFHQMWQINPDNLLSVLLEFYHEDEDNLGRIVEIAQDVKILDKLLT
VDDVAFTLDVASLASNKELLNLEQWLADAIEVKGEDFLEAVFEFIEHKVRLEMEHQHQPD
SAPPLNFTLGPKVYSIFIRVVRNAPNLSTNDIRRFNGFRGDILILHPRLLNLRPGDKSEQ
GFSEANFAKDVVEKADEMYQRMYTGQITLDEVVQELKRCQESDDSKDQDFFAQALHSLFD
EYRFVKAYPPKELTMTGLLFGAIIDYRFVKEVAAFVATRYVLDACKTPPHEAMYQFGINA
LSVLRHSLVDFPSFCRQLLEVPALHESHPVLINDIHQALVEREELDMQGGVKLAFPALRL
PILIEEGDDEFREPEPKKKDAIMFIINQIAPSNYESKSQELTKLFENQYSRWFAHYFIDV
RVSLEQNRHEIYQQVLDSLNSSVLERHVLWETYRKARDLLNSEATMNSASERTTLKTVAM
WLGRITLARNKPIRMRELSVKDLLIQGYDTERLIVAIPFVCNLLSSCKDSLVFHPPNPWI
VAILRLLAEFYHYAELRLNLKFEIEVLFGKLGVELESLEPANLLRMHVPPPAPQPELPNR
LDIELQRATSEIMNGGQRFSDLPGNEAYARMQQLQSEQAVQAAQDALARRVDELITQLPE
YLIFNQDYPIFTAPTLKRIVHHSIDRAIREIIGPVIERSVTIAGISSRDLIQKDFGTEPD
AMKMRSAAHMMVQNLAGSLALVTCKEPLRSSMIANVKSMLEQNGYTDETMPDAMIAGVVN
QNLDVACSVLKKAAMEKAAKDIDVNLAPQYAARKAHQNSRTQQPFWDGASFGVAISHAAL
PDPLKLRSGGLTAQQFRVYEDFGEPTRMISHPTPSTNGDYLAASYRDLTLNDGLVPSDIK
RGPSPRHAFGQDLIEPPESLASPQPIPPQTSIDRFHELAGEIEKSLSQTPLQSISALPAD
HEIRGLIRAVVIIANQSVHRETTTLTIAQKVVQLLYRSTASLAREVYVYLLQQLCDLSPT
VNKEVKQWLIYAEDMRKFNVPVTVTLIRAQSIGVHELDAALSQVAVRSYAPEILDFVAQL
IRECSVSEQAFIPRNGFANSLASLLKAHEIGRATPAVEALLDELRGGSRPPAEVAQASDS
EKPPIDTKLQERLAHYFLEWVRVFSTSKNAEVAFVPYITYLQKEGILNGEDVSSAFYRTA
INCAVDLDTAKLLPDGSSRFFGTDSLAKLIVLIVKNYGDKSGTSSVARAVYYYNKIITIM
SYSLVQRQLEMGEAFNQRPWARFFTSMLSELATLEYSLPDTYIGCLKHFANNLGITQPTY
APRFAFGWISIISHRLFMPKLLATSRDEGWPEFHRCVMWLLRFLFPFLQSGEMTPSSRSI
FKATVRLLMLLMHDFPEFLVEFYHTLSTAIPPHCVQLRNIILAAFPHTEAPLPDHYKRLD
QLVPEMQRFPTVRSDYIGALTDGNLKAAIDQYVRTGVPALPAIVSELKNRIAVKSVGADG
STNIAWNHTLMHASVFYLGTTAVARRFAQTGVVDFDAKAPEVGVLTGMAHAFDAEGQYYM
LSVVADQLRYPSAHTSFFIHFILFLFGTSAQTEVPSAIPERIGRILLERTLVQRPHPWGL
LVTFIELLDNEAYGFWKQPFVRAEEEVFRLFGQVRQSVASRRELQ
NT seq
6798 nt
NT seq
+upstream
nt +downstream
nt
atgtccatccctcctcccggactgggaggtggggtaagtaggactggacctcccccaggt
ttcgctgccgccgcgaacaaccattcgccttctaccgatgttgcgagcaatggacccggc
gtagctatgggaggtgccggtagtggtggcggtggcaggagagatggacaaggtggaaca
gctgtgattgttagagctcaaatagtgttcctcctcacgacgttcacggaggattcgttt
gacaaggcttcgaatgaaattagaactctcgcttctggaaatggaccggaaatgtatcat
cacttcttacgacgagctgtcgtggttgccaacccaatcctccaaaccctcatacaacat
tctcaacaatacaaggacgatccggcagcacccccacctcaaataccaaccacaggccaa
gctgctttggtctggagacttctcgtgacagaggcaattagagccgctcgagatgtccag
ctcgctcctcatttctctctcattatgctgtcgccatctccttcaacgcccctcccactt
ccctcattgcgactgttcaacctgccgccagcattactcttctccctctctgcatacacc
ctcgcttctcctcacgtcttccctcccactcacgcgtcatttgccgtattccatgcgatc
ctcgctcaaggcttccaaccgaccatggagctcttgcgatcgcccaatgtacccttctgg
acaatgaacgccatcccagggagagaaccatataccgacgatttaacccttcaagaagct
agaactctcatcctcgctctattccctagatcatccacgtcgtcaaacggaggaaacgca
tcacgacccgctacgccaacgaacccaacgccaccccactcctctcctctcaatactata
caacgagctaccctcctcgcatctctcaccgtcaagttctcctcccctgcaatcatccta
caaaccctatcagcattatcacctggcggtcctcctcgaaccccaggaagtatacctctt
gaggagattctattcgagcttggagagacactcacgcaagacgaagggaccgtggaagct
gtcgtcggacgatggtggggaccttggttgttggaaggattatcacccgaagagcagaag
cgacagaccaccgaagaggcttgccgagtcgaatccatctcatggcccgatgtcatccgc
tctttcgacacacctgttagcattgcagcctatcccacatctatccctcttctcatctgt
ctcatttgtctccctccccaatcaccaactccacctttggccggactcctcccagcaacc
attgattcaccaagctgggatcacatggcttccctcctatctatcctgtcgcaccttacc
acccttgctccagacatcatgccaatcttcaccatgcctacagctccttcgccttcgtca
tacgctcgaatcgtggatcctccatcaagcgaacaggtttggagcaagttggctcggcaa
caggcaagagatcttcaaggtgcaggactttggaacacccttggactgattcaagttctc
gtccatgctttcggattggcagaagtggatcatccctcggaaagagaaagggaggagcga
gcagaaattggcagacgagcatcgaacatcctggacaaagcgtatcagctagccccagag
ttggtcctgattgctttagagaagctgcctgtgagtttgacgtaccaagtgctcgctgac
atgcagaaacctcttcccgcccctatacacaacatgcacatccgactgctgtcgcgttat
ctcgcggcttcgcccgcgaacgagatgacatcgtcgtcgctcgtgttccatcagatgtgg
cagatcaacccggacaatcttctttctgtgctattggagttctatcacgaggatgaagat
aaccttggaaggatcgtggaaattgctcaggatgtaaagattctcgacaagctcctcaca
gtcgacgacgttgcattcaccctcgacgtcgcttcattggcgtccaacaaggagttgctc
aacctggagcagtggctcgccgatgcaatagaggtcaagggagaagatttcctcgaggct
gtattcgagttcattgagcacaaagtccgtctagagatggagcaccaacatcaacccgac
tccgctccgcctctcaacttcacccttggcccgaaagtgtactcaatcttcatccgagtc
gttcgaaatgcgcctaacctctccaccaacgatattcgtcgattcaacggcttccgtgga
gacatcctcatattgcatcctcgtctccttaatcttcgaccaggagacaagagcgaacag
ggattctctgaagccaactttgccaaggatgtggttgagaaagcggacgagatgtaccaa
cggatgtacaccggtcaaatcaccttagacgaggttgttcaggagctcaagcggtgtcaa
gaatcggatgattcgaaagaccaagacttcttcgctcaagcgcttcattctctcttcgac
gagtacaggtttgtaaaagcctatcctccgaaggagttgacaatgaccggactgttattc
ggagccattatcgactatcgattcgtgaaagaggtcgcggcgttcgtggcaactcgatac
gttctggatgcttgcaagacccctcctcatgaagcgatgtaccaattcggtattaacgca
ttgagcgttctgcgacactccctcgttgacttcccaagcttttgtcgacaattgctcgaa
gtccccgctcttcacgaatcacatccggttctcatcaacgatattcatcaagctttggtt
gagagggaggaattggacatgcaaggcggagtcaagcttgccttcccagcacttcgactg
cccatcctcatcgaagaaggtgacgacgaattccgagagcccgaaccgaagaagaaggac
gcaatcatgtttatcatcaaccaaattgcgcccagtaactacgagtcaaagtctcaggag
ctcacaaagctgttcgagaaccaatactctcgttggttcgcacactactttatcgatgtc
cgagtcagtctcgagcaaaatcgtcacgagatctaccagcaagttctcgactcgctcaac
tcttcggtcttggaacgtcatgttttgtgggagacatatcgaaaggcgagggatctattg
aactctgaggcaactatgaactcggcttcagagcgaaccaccctcaagaccgttgcgatg
tggcttggacggatcaccctggcgcgaaacaagcctatcagaatgagagagttgtcggtg
aaggatctcctcattcaaggatacgacacggagcgactcatcgtggcgattccattcgtc
tgcaacctactctcttcgtgcaaggactcgctcgtgttccaccctcccaacccttggatc
gtcgccatccttcgtcttctcgccgagttctaccactacgccgagttgcgtctcaacctc
aaattcgagatcgaagtgttgttcggcaagctcggcgtggagctcgagtctctcgaacct
gccaacctccttcgtatgcacgtccctcctccagcgcctcaaccggaactcccgaaccgc
ttggacatcgagcttcaacgggctaccagcgagatcatgaatggcggtcaacgattctcc
gaccttccagggaacgaggcgtacgctcgaatgcaacagcttcagtccgaacaggctgtt
caggccgctcaagacgctcttgcacgtcgcgtggacgagctgatcactcagcttcccgaa
tatcttatcttcaaccaggattacccgatcttcacagcacctacactcaagcgtatcgtt
caccactcgatcgaccgtgctattcgtgaaatcattggtcccgtcatcgagcgatctgtc
acgattgctggcatctcttctcgagatctcatccagaaggattttggcactgagcctgat
gcgatgaagatgcgttcagctgcccacatgatggtccagaatctcgctggcagtcttgct
ttggtgacctgcaaggagccactccgctctagcatgatcgccaatgtgaagtcaatgctc
gaacagaacggttacaccgacgagacgatgccggatgccatgatcgctggtgtcgtcaac
cagaacctcgatgtggcttgttccgtcttgaagaaggctgctatggagaaggctgccaag
gatattgatgtcaacctcgctccgcaatacgccgcgcgaaaggctcaccagaactcgagg
acccaacagcccttctgggatggtgcttctttcggtgtcgccatttcgcatgctgctctc
cctgacccccttaagcttcgttctggcggtttgacagcgcagcagttcagggtgtacgag
gatttcggcgagccgacccgaatgatcagccatcctacgccatcgaccaacggtgattac
ctcgctgcatcatacagagatctaactctcaacgatggtctcgtcccgtccgacatcaag
cgcggtccatctcctcgccacgccttcggacaagatctcatcgagccccccgagtctctc
gcatcccctcagcccatccctcctcaaactagcatcgacaggttccacgagctggcagga
gagatcgagaagagcttgtctcagactcctctccaatctatctcagccctccccgctgac
catgagatccgaggtttgatccgagctgtcgtcatcatcgccaatcagtcggtgcatcgc
gagactacgactctgacaattgcacagaaggttgtgcaactcttgtacagatcgacagcg
tcgcttgcgagagaggtgtacgtttatctcttgcagcagctttgcgatctgtcgcccacc
gtgaacaaggaggtcaagcagtggctcatctatgccgaggatatgcgtaaattcaacgtt
cctgtcaccgtcacgcttatccgcgctcagtctattggcgtccacgagcttgatgctgcc
ttatcccaggtcgctgtacgatcttacgctcccgagatcctcgacttcgtcgctcagctt
atccgagaatgttccgtttccgaacaagccttcatccctagaaacggcttcgcgaacagt
ttagcgtcgctcctcaaggctcacgagatcggtcgagctactcctgcggttgaagctctt
cttgacgaattgcgaggtggttctcgaccccctgccgaagtggctcaagcctctgatagc
gaaaagccccctatcgacactaagctgcaagagaggctcgcccactacttcctcgaatgg
gtgcgagtgttcagcaccagcaagaacgccgaggtcgcctttgtgccttacatcacatac
cttcagaaggagggtattcttaacggcgaagacgtgtcctctgcgttctaccgcactgct
atcaactgtgcggtcgatctcgataccgctaagctattgccggacgggagctcgcgattc
ttcggaactgattcacttgccaagctcatcgtgctcatcgtcaagaactacggagacaag
agcggtaccagcagcgtagctcgagctgtgtactactacaacaagatcatcaccatcatg
tcgtactccctcgtacagcgtcaactcgaaatgggtgaagcgttcaaccaaagaccttgg
gccaggttcttcacaagtatgctttcggagcttgccactctcgagtacagtcttccggac
acctacattggttgcttgaagcactttgcgaacaacttgggtatcactcaaccgacctac
gctcctcgattcgcattcggatggatttccatcatctcgcatcgactcttcatgcctaaa
ctccttgcgacctctcgtgacgagggatggcccgagtttcatcgatgtgttatgtggctc
ctccgcttcctgttccccttccttcagtctggcgagatgaccccttcgtccagatcgatc
ttcaaggcgacggtccgcttgctcatgctcctcatgcacgacttccccgagttcttggtc
gagttctaccacactctctcgacagcgattccacctcactgtgtccagctgcgaaacatc
atcctcgccgcgttccctcacaccgaggcgcctctgccagatcactacaagcgactcgat
cagctcgttccggagatgcagcggttccccacggttcgatccgattacatcggcgctctc
accgatggcaatctcaaggcggctatcgatcagtatgtccgaactggtgtgccagctctc
cctgccattgtgtcggaactcaagaacaggatcgctgtcaagtctgttggagcagatggc
agcactaacatcgcctggaaccacacgttgatgcacgcatcggtgttctaccttggtacc
acggcggtcgcaaggagattcgcacagactggcgtggtggactttgatgctaaggcgccg
gaagtgggcgtgttgactggaatggcacatgcgtttgacgcagaaggtcaatattacatg
ctcagcgttgtggccgaccagctccgatacccttcggcacacacgtcgttcttcatccac
ttcatcctcttcttgttcggcacttctgctcagaccgaggtcccctctgccatccccgag
cgtatcggtcgtatcctcctcgagcgaacccttgttcaacgacctcatccctggggtctt
ctcgtcacgttcatcgagttgctcgacaacgaggcttacgggttctggaagcagccgttt
gttcgggctgaagaggaagtctttagattgttcggtcaggtgcgacagtcggttgcctcg
aggagagagctgcagtag
DBGET
integrated database retrieval system
