Candidatus Kuenenia stuttgartiensis: KSMBR1_0560
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Entry
KSMBR1_0560 CDS
T05435
Symbol
fliA_1
Name
(GenBank) strongly similar to RNA polymerase sigma factor for flagellar operon
KO
K02405
RNA polymerase sigma factor FliA
Organism
kst
Candidatus Kuenenia stuttgartiensis
Pathway
kst02020
Two-component system
kst02040
Flagellar assembly
Brite
KEGG Orthology (KO) [BR:
kst00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
KSMBR1_0560 (fliA_1)
09140 Cellular Processes
09142 Cell motility
02040 Flagellar assembly
KSMBR1_0560 (fliA_1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
kst03021
]
KSMBR1_0560 (fliA_1)
09183 Protein families: signaling and cellular processes
02035 Bacterial motility proteins [BR:
kst02035
]
KSMBR1_0560 (fliA_1)
Transcription machinery [BR:
kst03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Sigma factors
KSMBR1_0560 (fliA_1)
Bacterial motility proteins [BR:
kst02035
]
Flagellar system
Flagellar assembly proteins
Stator
KSMBR1_0560 (fliA_1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Sigma70_r4
Sigma70_r4_2
Sigma70_r3
HTH_23
UPF0122
DUF1940
HNF-1_N
Motif
Other DBs
NCBI-ProteinID:
SOH03074
UniProt:
A0A2C9CBA7
LinkDB
All DBs
Position
MBR1:complement(615175..615624)
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AA seq
149 aa
AA seq
DB search
MAREAYATLEQKLNRHPLPEEIAAELGEIDTAEWEKLLVEINFGMFLSLEEMNAKSEDGN
KEAVGMLFADSKIGDPLSNIETEEEKELLVAAIKELPAREKLVITLYYYEDLMLREISQM
LDISESRVSQIHHQGLFMLRSKVRKIPIK
NT seq
450 nt
NT seq
+upstream
nt +downstream
nt
ttggcgagagaggcatatgcaacattagaacaaaaattaaacaggcatccactcccggaa
gaaattgcggcagaacttggagagattgatactgctgagtgggaaaaattactggtggaa
attaacttcggcatgtttctttcactcgaagaaatgaatgcaaagtcggaggatggtaat
aaagaagcggtaggaatgctatttgctgactcaaaaataggcgacccgttaagtaatatt
gagacagaggaagaaaaagaacttttagttgcggcgattaaagaattgccggctcgtgaa
aaattggtaataacactctattattacgaagacttaatgctgagggaaatcagccaaatg
ctggatatttcagaatcacgggtttcacaaattcaccatcagggcttatttatgcttcgt
tctaaggtaaggaaaattcctattaagtag
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