Kocuria varians: CIB50_0001772
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Entry
CIB50_0001772 CDS
T06882
Symbol
hisS
Name
(GenBank) Histidine--tRNA ligase
KO
K01892
histidyl-tRNA synthetase [EC:
6.1.1.21
]
Organism
kvr
Kocuria varians
Pathway
kvr00970
Aminoacyl-tRNA biosynthesis
Brite
KEGG Orthology (KO) [BR:
kvr00001
]
09120 Genetic Information Processing
09122 Translation
00970 Aminoacyl-tRNA biosynthesis
CIB50_0001772 (hisS)
09180 Brite Hierarchies
09181 Protein families: metabolism
01007 Amino acid related enzymes [BR:
kvr01007
]
CIB50_0001772 (hisS)
09182 Protein families: genetic information processing
03016 Transfer RNA biogenesis [BR:
kvr03016
]
CIB50_0001772 (hisS)
Enzymes [BR:
kvr01000
]
6. Ligases
6.1 Forming carbon-oxygen bonds
6.1.1 Ligases forming aminoacyl-tRNA and related compounds
6.1.1.21 histidine---tRNA ligase
CIB50_0001772 (hisS)
Amino acid related enzymes [BR:
kvr01007
]
Aminoacyl-tRNA synthetase
Class II (A)
CIB50_0001772 (hisS)
Transfer RNA biogenesis [BR:
kvr03016
]
Eukaryotic type
Aminoacyl-tRNA synthetases (AARSs)
Other AARSs
CIB50_0001772 (hisS)
Prokaryotic type
CIB50_0001772 (hisS)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
tRNA-synt_His
HGTP_anticodon
tRNA-synt_2b
tRNA-synt_2
Peptidase_S41
VirB7
5_3_exonuc
Exotox-A_target
LytR_C
Motif
Other DBs
NCBI-ProteinID:
QMS57047
UniProt:
A0A7D7L0P8
LinkDB
All DBs
Position
2003660..2005018
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AA seq
452 aa
AA seq
DB search
MARTTSLSGFPEWLPEERIVEQHVLDSLRRTFELHGFSSIETRAVETVEQLLRKGEIDKE
VYGVSRLQQDEEDSSKEGALALHFDLTVPFARYVVENNGYLTFPFRRYQIQKVWRGERPQ
EGRAREFTQADVDVVGDGTLPFRYDVELALVMIDALSALPIPPFVLRVNNRKLAEGFYRG
IGLEDAPAVLREIDKLEKIGADAVARNLQEAVGASPEQARAALALAEIRTEDTSFVEQVR
ALGQSNELLEEGLAELAEVVGEAARRAPGKVVADLSIARGLDYYTGTVYETVLVGHEQLG
SVCSGGRYESLASTGKKNFPGVGLSIGVTRLVTRILSQKMASASRSVPSAVLVALNDDES
WSAAQDVAGALRSRGIATEVAATAQKFGKQIRYAERRGIPFVWFTTVAEDGTVGHEVKDI
RSGEQVPADPQSWQPAPEDLRPGVAAAGSSED
NT seq
1359 nt
NT seq
+upstream
nt +downstream
nt
atggcacgcaccacctccctgtccggcttccccgaatggctcccggaggagcggatcgtg
gagcagcacgtcctcgactcgctgcgccgcacgttcgagctgcacggcttctcctccatc
gagacccgcgcggtcgagaccgtggagcagctgctgcgcaagggcgagatcgacaaggag
gtctacggcgtctcccgcctgcagcaggacgaggaggactcctccaaggagggtgcgctc
gcgctgcacttcgacctcacggtcccgttcgcccgctacgtggtggagaacaacggctac
ctcacgttcccgttccgccgctaccagatacagaaggtctggcgcggcgagcgcccccag
gagggccgcgcccgcgagttcacgcaggcggacgtggacgtcgtgggggacggcaccctc
ccgttccgctacgacgtcgagctcgccctcgtgatgatcgacgcgctgtcggcgctgccc
atcccgccgttcgtgctgcgcgtcaacaaccgcaagctggcggagggcttctaccggggc
atcggactcgaggacgcccccgcggtgctgcgggagatcgacaagctcgagaagatcggc
gcggacgcggtggcccgcaacctccaggaggccgtgggcgcgagccccgagcaggcacgg
gccgcgctggcgctcgcggagatccgcaccgaggacacctccttcgtggagcaggtgcgg
gccctgggccagagcaacgagctgctggaggagggcctcgcggagctcgccgaggtcgtg
ggggaggccgcccgccgtgcgccggggaaggtggtcgctgacctgtcgatcgcccgtggc
ctcgactactacacgggcaccgtctacgagacggtcctggtgggacacgagcagctcggc
tcggtgtgctccggcggccgctacgagtccctcgcgagcaccggcaagaagaacttcccg
ggcgtggggctgtccatcggcgtgacccggctggtcacgcgcatcctgtcgcagaagatg
gcctcggcgtcccggtccgtgccctcggccgtgctcgtggccctgaacgacgacgagtcg
tggtccgccgcgcaggacgtcgccggcgcgctgcgctcccggggaatcgccaccgaggtg
gccgccacggcccagaagttcggcaagcagatccgctacgccgaacgccggggcatcccg
ttcgtgtggttcaccaccgtggccgaggacggcacggtgggccacgaggtcaaggacatc
cgctccggcgagcaggtcccggcggacccgcagtcgtggcagcctgcccccgaggacctg
cgcccgggcgtcgccgccgcggggtcgtccgaggactga
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