Kurthia zopfii: NCTC404_01685
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Entry
NCTC404_01685 CDS
T05934
Symbol
recQ
Name
(GenBank) ATP-dependent DNA helicase recQ
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
kzo
Kurthia zopfii
Pathway
kzo03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
kzo00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
NCTC404_01685 (recQ)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
kzo03019
]
NCTC404_01685 (recQ)
03400 DNA repair and recombination proteins [BR:
kzo03400
]
NCTC404_01685 (recQ)
Enzymes [BR:
kzo01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
NCTC404_01685 (recQ)
Messenger RNA biogenesis [BR:
kzo03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
NCTC404_01685 (recQ)
DNA repair and recombination proteins [BR:
kzo03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
NCTC404_01685 (recQ)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DEAD
Helicase_C
ResIII
RecQ_Zn_bind
DUF5637
P-loop_SecA
Motif
Other DBs
NCBI-ProteinID:
VEI06230
LinkDB
All DBs
Position
1:1649294..1650733
Genome browser
AA seq
479 aa
AA seq
DB search
MLESFLKKHFGYESFRTGQKEVIEAVIDKQDVVALLPTGSGKSICYQLPAYILDGAVLVI
SPLLSLMQDQVEQLKKNGEKRVIAINSFLTRDQRQQVFSNLSNYRFIFVSPEMFSSNMFQ
NAIRDVKLSLIAVDEAHCISQWGFDFRPEYLQIGEFLNRGNRPPILALTATATEQVILDI
QNYLGMKEATKWISSVDRLNIAYQVIRTSNHSEKNNWIIQHVAETVGPGIVYTQSRKKTL
EITNLLKEKNVRVEAYHAGMDAQDRQLIQHQYIAGDLDWIISTNAFGMGVHKPDIRQIIH
DHMPSNTASYVQEVGRAGRDGEQSYATLLYSNEDEKFTKSVATMDYPNEYQMEQYDSYRL
QGINPTAMVTDHVIAETSFRILHYWMSRFSLDEVKVQIQKMQIEKINEVELLKNSLLGEQ
CIREGLNRYFGQNLESKPTLCCSNCGLPDSFIPINPKELVKATDELSWKDRITQLFMVK
NT seq
1440 nt
NT seq
+upstream
nt +downstream
nt
atgcttgaatcgtttttgaaaaagcattttggttatgaatcgttccgaacgggtcaaaag
gaagtaatcgaagcggtgatagacaagcaagatgtagtggcgctactgccaacgggaagc
gggaaatcaatttgctatcaactgcccgcgtatattttagatggcgcagtacttgtcatt
tcgccccttttatctttaatgcaagaccaagttgaacaattaaagaaaaatggtgagaaa
agagttattgcgatcaactcttttttaacgagggatcagcgtcaacaagttttctcaaat
ttatcaaattatcgctttatttttgtatcgccagaaatgtttagttcaaatatgttccaa
aatgctattcgagatgtgaaattatcattaatagcagttgatgaggcgcattgtatatct
caatggggattcgattttcgacctgagtatttacaaattggagaatttttaaatagaggt
aatcgtccgccaattttagctttaactgcaacagctacagaacaagttattttagatata
caaaattatttaggaatgaaagaagcgacaaaatggatttcttcagttgatcgactgaat
attgcttaccaagttattcgaacatccaatcattcggaaaaaaataattggattatacag
catgtggcggaaacggttggaccaggaatcgtgtatacgcaatctcgtaaaaaaacatta
gaaataacaaatttactaaaagagaaaaatgttcgtgttgaagcgtatcacgcaggaatg
gatgcacaagatcgccaattgattcaacatcaatatatcgcgggtgatttagattggatt
atctcgactaatgcttttggaatgggtgttcataagccggatatccgccaaattattcat
gatcatatgccgagtaatactgcgagttatgtacaggaagttggtcgtgctgggcgagat
ggtgaacaatcctacgcgacattactctacagtaatgaagatgagaaatttacaaagtca
gttgcgacaatggattatccgaatgaatatcaaatggagcagtatgacagctatcgttta
caaggaatcaatcctactgctatggtgacagatcatgtaatagccgaaacgagttttaga
atattgcattattggatgagccgtttttcacttgatgaagtaaaggttcaaattcaaaaa
atgcaaattgaaaaaataaatgaagtagaattgcttaaaaatagtttattaggggaacag
tgtataagagaaggtttaaatcggtattttggtcaaaatttggaaagtaaaccaacactt
tgttgttcgaattgtggacttcccgattcttttattccaattaatccaaaagaattagtg
aaagctaccgatgaactatcatggaaggaccgaattactcaattatttatggtgaaatag
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