Lysobacter antibioticus 76: LA76x_2008
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Entry
LA76x_2008 CDS
T04154
Name
(GenBank) efflux transporter, outer membrane factor (OMF) lipo, NodT family protein
KO
K18139
outer membrane protein, multidrug efflux system
Organism
lab
Lysobacter antibioticus 76
Pathway
lab01501
beta-Lactam resistance
lab02024
Quorum sensing
Module
lab_M00642
Multidrug resistance, efflux pump MexJK-OprM
Brite
KEGG Orthology (KO) [BR:
lab00001
]
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
LA76x_2008
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
LA76x_2008
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
lab02000
]
LA76x_2008
01504 Antimicrobial resistance genes [BR:
lab01504
]
LA76x_2008
Transporters [BR:
lab02000
]
Other transporters
Pores ion channels [TC:
1
]
LA76x_2008
Antimicrobial resistance genes [BR:
lab01504
]
Gene sets
Multipdrug resistance modules
Multidrug resistance, efflux pump MexAB-OprM [MD:
M00718
]
LA76x_2008
Multidrug resistance, efflux pump MexJK-OprM [MD:
M00642
]
LA76x_2008
Multidrug resistance, efflux pump MexXY-OprM [MD:
M00643
]
LA76x_2008
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
OEP
Motif
Other DBs
NCBI-ProteinID:
ALN80151
UniProt:
A0A0S2F9E7
LinkDB
All DBs
Position
complement(2255767..2257245)
Genome browser
AA seq
492 aa
AA seq
DB search
MLAPLAAALILAGCASTRGLVPEGRALDADDLATQRSFADATLSEATFPKRDWWTSLGDT
QLNGLIDEALAGTPGLDAADARVRQAVAQAGLADAARKATLGGSAQYSGLQLPETVAPEP
LGGKYSGVEVLSLSFKYSPDLWGGKRARWHAALGQARAAEVESQAARLTLSSNIARAYVS
LAQAYAGLDVAQAEKQRSEHLLGLGRQRVKAGLDNQLQIRNAESASAAADQQMQSAQQQI
DATRNAIAALLGKGPDRGLEIARPSLLKAKSPAVPAVTSSELLGHRPDVVAARWRVEAAS
HGIKAAKAEFYPSVNLSAMLGLASGGLSDLFSSDAVLIQGGPAISLPIFDGGRLRNQLAE
SDAEYDLAVANYNQNLVAALREVADALQASRSLDAQLISAQQARDAAQQAWQIASTRYRA
GLGTQLDVLSAQRPLLQLDQQLAGLRAQRLAAAIELDRALGGGLELRAPDPVAATRPVTT
SDSSVIAKASTP
NT seq
1479 nt
NT seq
+upstream
nt +downstream
nt
gtgctcgcgccgctcgccgcggccttgatcctcgccggctgcgccagcacccgtggtctg
gtccccgaaggccgcgcgctcgacgccgacgacctggcgacccagcgcagcttcgccgac
gccaccttgtcggaggccacgttcccgaagcgcgactggtggacctcgctcggcgatacg
caattgaacggcttgatcgacgaagccctggcgggcacgccgggcctggacgccgccgac
gcgcgcgtgcgccaggccgtcgcccaggccggcctcgccgatgccgcgcgcaaggccacc
ctcggcggcagcgcccagtattccggcctgcaactgcccgagacggtcgccccggaaccg
ctcggcggtaaatacagcggcgtggaagtgctgtcgctgagcttcaagtacagccccgat
ctgtggggcggcaaacgcgcgcgctggcatgccgcactcggccaggcccgcgccgccgaa
gtcgaatcgcaggccgcgcgcctgaccctgtcgtcgaacatcgcccgcgcctacgtctcg
ctggcccaggcctatgccgggctcgacgtcgcccaggccgagaagcaacgttccgaacat
ctgctcggcctcggccgccagcgggtcaaggccggcctcgacaatcaactgcagatccgc
aacgccgaaagcgcgagcgccgccgccgatcaacagatgcagtcggcgcagcagcagatc
gatgcgacgcgcaacgcgatcgccgccttgctcggcaaaggccccgaccgcggccttgag
atcgcgcgcccgtccctgctgaaagcgaagtcgccggcggtgccggcggtgacctcgagc
gaattgctcggccatcgtcccgacgtggtcgccgcgcgttggcgcgtggaagccgcatcg
cacggcatcaaggcggccaaggccgagttctatccgagcgtgaatctcagcgcgatgctc
ggactggcctccggcggcctgtcggatctgttcagcagcgacgcggtgctgatccagggc
ggcccggcgatcagcctgccgatcttcgacggcggccgcctgcgcaaccagctcgccgaa
agcgatgccgagtacgacctcgccgtcgccaactacaaccagaacctggtcgcggccctg
cgcgaagtcgccgatgccctgcaggcttcgcgttcgctcgatgcgcagttgatttcggcg
caacaggcgcgcgatgccgcgcaacaggcctggcaaatcgccagcactcgctaccgtgcc
ggcctgggtacgcaactcgacgtgctgtcggcgcagcgcccgctgttgcagctcgaccaa
cagctcgccggcttgcgcgcacagcgcctggccgcggcgatcgaactcgaccgcgcgctc
ggcggcggtctcgaactgcgcgctcccgacccggtcgccgccacgcgccccgtcaccact
tccgattccagcgttatcgccaaggcctccacgccatga
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