Labrenzia sp. VG12: CHH27_00350
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Entry
CHH27_00350 CDS
T04984
Name
(GenBank) microcin ABC transporter ATP-binding protein
KO
K10823
oligopeptide transport system ATP-binding protein
K15583
oligopeptide transport system ATP-binding protein
Organism
labr
Labrenzia sp. VG12
Pathway
labr01501
beta-Lactam resistance
labr02010
ABC transporters
labr02024
Quorum sensing
Brite
KEGG Orthology (KO) [BR:
labr00001
]
09130 Environmental Information Processing
09131 Membrane transport
02010 ABC transporters
CHH27_00350
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
CHH27_00350
09160 Human Diseases
09175 Drug resistance: antimicrobial
01501 beta-Lactam resistance
CHH27_00350
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
labr02000
]
CHH27_00350
Transporters [BR:
labr02000
]
ABC transporters, prokaryotic type
Peptide and nickel transporters
Oligopeptide transporter
CHH27_00350
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_tran
AAA_21
SMC_N
oligo_HPY
AAA_29
AAA_16
AAA_22
nSTAND1
nSTAND3
ATP-synt_ab
NACHT
RsgA_GTPase
DUF87
AAA_23
AAA_7
SbcC_Walker_B
AAA_13
NB-ARC
Motif
Other DBs
NCBI-ProteinID:
ASP31873
UniProt:
A0A222F101
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All DBs
Position
83538..85163
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AA seq
541 aa
AA seq
DB search
MTQDSKKAVLSIKDLVVDFETATGTVNAVRGVDIHVDAGETVAIVGESGSGKSQTMMAAM
GLLASNGRTQGEVIYEDRNILGLPISQLNKVRGKKITMIFQEPMTSLDPLYTIGRQLAEP
MVVHGGLSWKAAKAKALDLLKLVNIPEPERKIKAYPYEMSGGQRQRVMIAMALANDPDVL
IADEPTTALDVTTQAQILDLLADLQKRLGMAVIFITHDLGIVRRIADRVYVMKTGEVVES
GETKQIFTQPEHPYTKMLLDAEPTGHKPPVPDSSPVLLEAQKVEVEFELDSGFLKPKHIL
RAVDDISFSLRKGQTLGIVGESGSGKSTLGRAVLNLLPAGGRVVFQGQQISGKDRNAMRA
LRKDMQLIFQDPFGSLSPRMTVGQIISEGLLVHEPSLSAKDRDLRACQALEEVSLDPIMR
NRYPHEFSGGQRQRIAIARTMVLKPELVVLDEPTSALDRTIQKQVVELLRDLQKAHDLTY
LFISHDLAVVRALSDTVMVMQRGKVVEAGSADAIFEAPKCDYTKELIGAAMLTQQQMMES
A
NT seq
1626 nt
NT seq
+upstream
nt +downstream
nt
atgacacaagacagcaagaaagcggtcctctccatcaaggatctggtcgttgatttcgag
acggccaccggtacggtcaatgcggttcgcggcgtggacatccacgtcgatgccggggaa
accgtcgcaattgttggcgagagtggctccggcaagagccagaccatgatggctgccatg
gggcttctggcctccaacggccgcacgcaaggggaggtgatctacgaagatcgcaacatc
ctcggcctgccgatcagccagctgaacaaggtccgcggcaagaagatcaccatgatcttc
caggagccgatgacctccctcgacccgctctacacaatcggccgccagctggcggagccg
atggttgtccatggcggattgtcctggaaggcggccaaggccaaggcgctggatctgctc
aagctcgtcaacattcccgagccggagcgcaagatcaaggcctatccgtacgagatgtcg
ggtggccagcgccagcgcgtcatgatcgccatggcccttgccaatgatccggacgtcctg
atcgcagatgagccgacaaccgcgctggacgtcaccacgcaggcccagatcctggacctg
ctcgcggacctgcagaaacgcctcggcatggcggtgatcttcatcacccacgaccttggc
atcgtccggcggatcgccgaccgtgtctacgtgatgaaaaccggcgaagtggtggagagc
ggcgaaaccaagcagatcttcacccagccggagcatccctataccaagatgctgctggat
gcggagccgaccggccacaagccgccggtgcccgacagttccccggttctgctcgaagcg
cagaaggtcgaggtcgagttcgaactcgacagcggcttcctcaaaccgaagcatattctg
cgcgccgtcgacgatatcagcttctctctgcgcaagggacagacgcttggcattgtcggc
gagagtggttccggcaagtcgaccctcggacgcgcggtgctgaacctgcttccggccggt
ggccgggtggtcttccagggacagcagatctccggcaaggaccgcaacgccatgcgggca
ctgcgcaaggacatgcagctgatcttccaggatccgttcggctcgctcagcccgcgcatg
accgtggggcagatcatttccgaaggcctcctggtgcatgaaccgtcgctttcggccaag
gaccgggatctgcgtgcctgccaggctctggaggaagtgtcgctcgacccgatcatgcgc
aaccgctatccgcacgagttttcaggcggccagcgccagcgcattgcaatcgcacggacc
atggtgctgaaaccggaactggtcgttctcgacgagccgacgtccgcgctcgaccggacc
atccagaaacaggtggttgaactcttgcgcgatctgcagaaagcgcatgacctgacctac
ctgttcatctcgcacgaccttgcggtcgttcgggcgttgtctgacacggtgatggtgatg
cagcggggcaaggtcgttgaggctgggtccgcggatgcgatctttgaagcgcccaaatgc
gactacaccaaagagctgatcggtgcggccatgctgacccagcaacagatgatggaaagc
gcctga
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