KEGG   Labrenzia sp. THAF35: FIU93_20130
Entry
FIU93_20130       CDS       T06351                                 
Symbol
hfq
Name
(GenBank) RNA-binding protein Hfq
  KO
K03666  host factor-I protein
Organism
labt  Labrenzia sp. THAF35
Pathway
labt02024  Quorum sensing
labt03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:labt00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    FIU93_20130 (hfq)
 09140 Cellular Processes
  09145 Cellular community - prokaryotes
   02024 Quorum sensing
    FIU93_20130 (hfq)
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:labt03019]
    FIU93_20130 (hfq)
   03036 Chromosome and associated proteins [BR:labt03036]
    FIU93_20130 (hfq)
Messenger RNA biogenesis [BR:labt03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   Other RNA degradation factors
    Chaperones
     FIU93_20130 (hfq)
Chromosome and associated proteins [BR:labt03036]
 Prokaryotic type
  Nucleoid associated proteins
   Other nucleoid associated proteins
    FIU93_20130 (hfq)
SSDB
Motif
Pfam: Hfq Hfq_1 AcMNPV_AC11
Other DBs
NCBI-ProteinID: QFT69107
LinkDB
Position
4347056..4347310
AA seq 84 aa
MAERAQNLQDTFLNHVRKQKTPLTIFLINGVKLQGVVTWFDNFCVLLRRDGHSQLVYKHA
ISTIMPNGPVQLFDQAEENAEKAS
NT seq 255 nt   +upstreamnt  +downstreamnt
atggctgagcgcgcacaaaatctccaagacacttttcttaatcacgttcgcaagcaaaaa
actcctctgacgatttttctgatcaacggtgtgaaattgcagggtgtcgtgacatggttc
gacaacttctgcgttctgctgcgtcgtgatgggcattcccagctggtttacaaacacgcg
atttccacaattatgccaaacggacctgttcaactgttcgatcaggctgaggaaaacgct
gaaaaggcaagctga

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