Lactobacillus acidophilus NCFM: LBA1329
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Entry
LBA1329 CDS
T00231
Name
(GenBank) geranylgeranyl diphosphate (GGPP) synthase
KO
K13789
geranylgeranyl diphosphate synthase, type II [EC:
2.5.1.1
2.5.1.10
2.5.1.29
]
Organism
lac
Lactobacillus acidophilus NCFM
Pathway
lac00900
Terpenoid backbone biosynthesis
lac01100
Metabolic pathways
lac01110
Biosynthesis of secondary metabolites
Module
lac_M00364
C10-C20 isoprenoid biosynthesis, bacteria
Brite
KEGG Orthology (KO) [BR:
lac00001
]
09100 Metabolism
09109 Metabolism of terpenoids and polyketides
00900 Terpenoid backbone biosynthesis
LBA1329
09180 Brite Hierarchies
09181 Protein families: metabolism
01006 Prenyltransferases [BR:
lac01006
]
LBA1329
Enzymes [BR:
lac01000
]
2. Transferases
2.5 Transferring alkyl or aryl groups, other than methyl groups
2.5.1 Transferring alkyl or aryl groups, other than methyl groups (only sub-subclass identified to date)
2.5.1.1 dimethylallyltranstransferase
LBA1329
2.5.1.10 (2E,6E)-farnesyl diphosphate synthase
LBA1329
2.5.1.29 geranylgeranyl diphosphate synthase
LBA1329
Prenyltransferases [BR:
lac01006
]
Terpene biosynthesis
Prenyl diphosphate synthase
LBA1329
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
polyprenyl_synt
Motif
Other DBs
NCBI-ProteinID:
AAV43156
UniProt:
Q5FJG8
LinkDB
All DBs
Position
complement(1307596..1308465)
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AA seq
289 aa
AA seq
DB search
MTAFTYFKDEWTPVIDNYLAKHLASEIDDQKISQIMSYSVMAGGKRLRPLLFLATLNALG
KKIEESEIRLACGIELIHTYSLIHDDLPAMDNDDYRRGKLTSHKKWGEAEAILAGDALLP
LGVQWIAEGSNSSELVIMITKAIGANGMVGGQYLDIDSTNNASVADDEKFINKMEWLKTG
CLIQASVEMAAVYAKASDIEQVKLVDFAKTFGRSYQIYDDLVDVVETSEEAGKATHKDEE
EGKNNTLTLLGIEKSRKELKDLISQAKADLHGINNEVLLGFLDLYHKVL
NT seq
870 nt
NT seq
+upstream
nt +downstream
nt
atgacagcttttacttattttaaagatgaatggacacctgtaattgacaattatctagct
aagcatttagcttcagaaattgatgatcaaaaaattagtcaaataatgtcatattcagtt
atggcaggagggaaacgtttaagacctttactttttttagctactttaaatgcattaggt
aaaaagattgaagaatctgaaattagacttgcttgtggtattgaattaattcacacatat
tcattgattcatgatgatttgcctgcaatggataatgatgattatcgccgtggcaagtta
actagccataaaaaatggggtgaagcagaggcgattttggctggggatgctttattacca
cttggagttcaatggattgcagaaggcagcaattcttcagagttagttattatgatcact
aaagctattggagctaacggtatggttggcggtcaatatttggatattgattcaactaat
aatgctagtgttgctgatgatgaaaagttcatcaataagatggaatggttaaaaaccggc
tgtttaattcaagcaagtgtagaaatggccgcagtttatgccaaagctagtgatattgaa
caagttaaattagttgattttgctaaaacttttggtcgttcatatcaaatatatgatgat
ctggttgatgttgttgaaacaagcgaagaagctggtaaagcaacacataaagatgaagaa
gagggcaaaaataatacgctgactttacttggaatagaaaaaagtcgcaaagaacttaaa
gatttgattagtcaggctaaagctgatttacatggaatcaataatgaagtattgcttggt
tttttagatctatatcataaggtgttataa
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