Ligilactobacillus acidipiscis: LAC1533_1764
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Entry
LAC1533_1764 CDS
T05349
Name
(GenBank) DNA-directed RNA polymerase beta subunit
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
laca
Ligilactobacillus acidipiscis
Pathway
laca03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
laca00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
LAC1533_1764
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
laca03021
]
LAC1533_1764
03400 DNA repair and recombination proteins [BR:
laca03400
]
LAC1533_1764
Enzymes [BR:
laca01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
LAC1533_1764
Transcription machinery [BR:
laca03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
LAC1533_1764
DNA repair and recombination proteins [BR:
laca03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
LAC1533_1764
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_2
RNA_pol_Rpb2_3
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_1
Motif
Other DBs
NCBI-ProteinID:
SFV41187
UniProt:
A0A1K1KQK2
LinkDB
All DBs
Position
I:complement(1907408..1910992)
Genome browser
AA seq
1194 aa
AA seq
DB search
MAGHLVKYGKNRVRRSYSRIKEVLDLPNLVEIQTNSYKWFLDEGLREMFEDIMPIDDFQG
KLSMEFVDYQLLEPKYTVDEAREHDANYSAPLHVTLRLINHETDEIKSQDVFFGDFPLMT
REGTFIINGAERVIVSQLVRSPGVYFNSELDKNGRTNYGTTVIPNRGAWLEYETDAKNIS
YVRIDRTRKIPMTELIRALGYGSDSEILDMMGETDSLMFTLEKDVHKNPEDSRVEESLKD
IYERLRPGEPKTADSSRSLLTARFFDPKRYDLAAVGRYKINKKLDLKTRLLNSVVAETLA
DPDTGEIIVNKDETIDKRVMDKLAPYLKRDDFKMVTFQPSDDGVVQEPMKLQIIKVYSKN
DPERVVNIMGNGNVDLKYKHITPADIIASMNYFFNLQEGYGSTDDIDHLGNRRIRSVGEL
LQNQFRIGLSRMERVVRERMSIQDTSTVTPQQLINIRPVVASIKEFFGSSQLSQFMDQTN
PLGELTHKRRLSALGPGGLTRDRAGYEVRDVHYTHYGRMCPIETPEGPNIGLINSLASYA
RVNKYGFVETPYRRVSWDTHKVTQKIDYLAADEEDPYVVAQANTPLNDDGSFVNDIVMAR
KEEENMEISIDKVDYMDVSPKQVVAVATACIPFLENDDSNRALMGANMQRQAVPLLQPHS
PLVGTGIEYKAAHDSGDALIADHDGVVEYVDAKEIRVRLEDGSLDKYKLMKFRRSNGGKN
YNQTPIVHVGEEVEADSVLADGPSMEQGELALGQNPLIAFMTWDGYNFEDAIAISERLVK
DDVYTSIHIEEHESEARDTKLGPEEITREIPNVGEDALKDLDEFGIVRIGAEVQDGDILV
GKVTPKGVTELSAEERLLHAIFGEKAREVRDTSLHVPHGGGGIVQDVKIFTRQNGDELSP
GVNQMVRVYIAQKRKLQVGDKMAGRHGNKGTVSVVIPEEDMPFMPDGTPIDIMLSPMGVP
SRMNIGQVLDLHLGMAARKLGIHVASPVFDGATDDDIWAALKEAGLPNDGKSILYDGRTG
EPFDNRIAVGVMYYMKLAHMVDDKIHARSIGPYSLVTQQPLGGKAQFGGQRFGEMEVWAL
EAYGAAYTLQEILTYKSDDVTGRVRTYEAIVKGEPIPQPGVPESFRVLVKELQALGLDMK
VLDSDKQEIELREMDDDDDEVVNVDALNKYAKEQADKKAEEAQESKDSETEQKS
NT seq
3585 nt
NT seq
+upstream
nt +downstream
nt
ttggcaggacacttggtaaaatacggcaaaaaccgtgtgcgtagaagttattcccgcatt
aaggaagttcttgatctgcctaacttggtcgagatccaaactaattcctataaatggttc
ttagatgaaggtttacgggaaatgtttgaagacattatgccgatcgatgacttccagggt
aagctttccatggaatttgtcgattatcaacttttagaaccaaagtataccgttgatgag
gcacgtgaacatgatgctaactattctgcaccactgcacgttactttgcgtttgatcaac
catgaaacagatgaaatcaaatcacaagacgtgttcttcggtgattttcctttaatgact
agggaaggaacatttattatcaatggggcagaacgtgttatcgtttcacaattagttcgt
tcccctggtgtgtattttaattctgagctggataagaatggccggaccaactatgggact
acagtcattcctaaccgtggtgcttggttggaatatgaaacagacgctaagaatatctca
tatgttcggatcgaccggacacgtaagatcccgatgactgaactgatccgtgctttaggt
tatggttctgacagtgagatcttggatatgatgggcgaaacagatagtttaatgttcacc
ttagaaaaagacgtgcataagaatcctgaagattctcgagttgaagaatcactgaaggat
atctatgaacggctgcgtcctggtgaacctaagacggctgattcttccagaagtttgtta
actgcacgtttctttgatcctaaacgttatgacctagctgctgttggtcgttataagatc
aataaaaaattagacttgaagactcgtttactgaactcagtagttgctgaaaccttggct
gaccctgatacgggtgagatcatcgtcaacaaagacgaaacgatcgataaacgagtaatg
gacaaattagcaccttacttgaaacgcgatgactttaagatggtcactttccaaccttct
gatgatggtgtagttcaagaaccaatgaaattgcagatcattaaggtttattcgaaaaat
gacccagaacgtgtcgttaatattatgggtaatggtaatgttgatttgaaatacaagcat
attactccagccgacatcatcgcttccatgaactacttcttcaacttgcaagaaggctac
ggttcaactgatgatatcgatcacttgggtaaccgacggatccgttctgttggtgaatta
ttgcaaaatcagttccggatcggtttatcccggatggaacgtgttgttcgtgaaagaatg
tcgatccaagatacttccacagtgacaccgcaacaattgatcaatattcgtccagttgtg
gcttcgatcaaagaattctttggtagttcacagctgtcacagttcatggaccagactaac
ccattgggtgaattaacgcataagcgtcgtttatctgccttgggacctggtggtttgact
cgtgatcgtgccggatatgaagttcgtgacgttcactatactcactatggccggatgtgc
ccgatcgaaactcctgaaggtcctaacattggactgatcaacagtttggcatcgtacgcc
cgtgttaataagtatggtttcgttgaaactccgtaccgtcgtgtatcttgggatacgcat
aaagttacccaaaagatcgactacttggctgctgacgaagaagatccatacgtagttgct
caggctaacactccgttgaacgatgatggttcatttgtcaatgacatcgttatggcccgt
aaagaagaagaaaacatggaaatcagcatcgataaggtcgattacatggatgtttctcct
aagcaggttgttgcagttgctacggcatgtattcctttcttggaaaacgatgactctaac
cgtgctttgatgggtgccaacatgcagcgtcaggctgtgccgttgctgcagccgcattct
ccgttagtcggaactggtattgaatacaaggctgctcatgattctggtgatgctttgatc
gccgatcatgatggggtagttgaatatgttgatgctaaagagatccgtgttcgtctagaa
gacggttcgctcgacaaatataaattaatgaaattccgccgttcaaatggtggtaaaaac
tataaccaaactccgatcgtccatgttggtgaagaggtcgaggcagattctgtcttagcc
gatggtccttcgatggaacaaggggaattagctttgggacaaaacccattgattgccttt
atgacttgggatggctataactttgaagatgcgatcgctattagtgaacgcttagttaaa
gatgatgtttacacttcgatccatattgaagaacatgaatctgaagcacgtgacaccaaa
ctgggacctgaagaaattactcgtgagatcccgaacgtcggtgaagatgctttgaaagat
cttgatgaatttgggatcgtccgcattggtgctgaagtgcaagacggtgacattttggtt
ggtaaggttactcctaagggtgtgactgaattatcagctgaagaacgtttgctgcatgct
atcttcggtgaaaaagcccgtgaagttcgtgatacttcactccatgttcctcatggtggt
ggcggtatcgttcaagatgtcaagatctttactcgtcaaaacggcgatgaactctcgcct
ggtgttaaccaaatggtccgcgtttatatcgctcagaagcgtaaacttcaagttggtgat
aagatggccggacgtcatggtaacaagggtactgtttccgttgttatcccagaagaagat
atgccattcatgcctgatggaacaccgatcgacattatgttgtcgccaatgggtgttcct
tcccggatgaatattggtcaggttttggacttgcacttgggaatggctgcccgtaagtta
ggtatccatgttgcttcacctgtttttgatggtgcaactgacgatgacatttgggctgct
ttgaaagaagccggcttgcctaacgatggtaagagcatcttgtacgatggccggacaggt
gaaccgtttgataatcggatcgccgttggtgttatgtactacatgaagttagctcatatg
gtcgacgataagatccatgctcgttcaattggaccatattcactagttacgcaacaacca
ttaggtggtaaagcacagtttggtgggcagcgtttcggtgaaatggaagtttgggctttg
gaagcttacggtgctgcttatacactgcaagaaatcttgacctacaagtctgatgacgtc
accggacgtgtccggacttatgaagccatcgtcaaaggtgaaccgatccctcaaccagga
gtaccggaatcattccgcgtacttgttaaggaattacaagctctgggcttagacatgaaa
gtgctcgatagcgacaagcaagaaatcgaattacgtgaaatggacgacgatgatgatgaa
gtcgtcaacgtagacgctttgaacaagtatgctaaagaacaagctgataaaaaggctgaa
gaggcacaagaaagtaaagattcagagactgaacaaaaatcttaa
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integrated database retrieval system
