Lacibacter sediminis: H4075_02960
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Entry
H4075_02960 CDS
T06746
Symbol
ffh
Name
(GenBank) signal recognition particle protein
KO
K03106
signal recognition particle subunit SRP54 [EC:
3.6.5.4
]
Organism
lacs
Lacibacter sediminis
Pathway
lacs02024
Quorum sensing
lacs03060
Protein export
lacs03070
Bacterial secretion system
Brite
KEGG Orthology (KO) [BR:
lacs00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03060 Protein export
H4075_02960 (ffh)
09130 Environmental Information Processing
09131 Membrane transport
03070 Bacterial secretion system
H4075_02960 (ffh)
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
H4075_02960 (ffh)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02044 Secretion system [BR:
lacs02044
]
H4075_02960 (ffh)
Enzymes [BR:
lacs01000
]
3. Hydrolases
3.6 Acting on acid anhydrides
3.6.5 Acting on GTP to facilitate cellular and subcellular movement
3.6.5.4 signal-recognition-particle GTPase
H4075_02960 (ffh)
Secretion system [BR:
lacs02044
]
Sec (secretion) system
Prokaryotic Sec-SRP core components
H4075_02960 (ffh)
Eukaryotic Sec-SRP protein
H4075_02960 (ffh)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
SRP54
SRP_SPB
SRP54_N
Zeta_toxin
AAA_22
CLP1_P
nSTAND3
AAA_18
cobW
ATPase
AAA_33
SRPRB
AAA_17
CbiA
APS_kinase
KAP_NTPase
DO-GTPase1
TsaE
ATP_bind_1
AAA_16
SLFN-g3_helicase
AAA_24
AAA_30
MMR_HSR1
KTI12
ATP_synth_reg
6PF2K
ResIII
AAA_11
NACHT
FtsK_SpoIIIE
AAA
AAA_14
AAA_19
Fucose_iso_N2
ATPase_2
Thymidylate_kin
NPHP3_N
Motif
Other DBs
NCBI-ProteinID:
QNA45176
UniProt:
A0A7G5XI73
LinkDB
All DBs
Position
complement(649603..650928)
Genome browser
AA seq
441 aa
AA seq
DB search
MFQNLSERLESAFKNIKGEGRITELNIAATVKDIRRALVDADVNYKIAKDFTDTVKDKAQ
GSKVLLAVNPGQQMVKIVQDELTELMGGTESELELKGAPAVILIAGLQGSGKTTFSGKLA
NYLKTQKGKSPLLVAADIYRPAAIDQLTVLAGQIGVDIYSERENKDAVAIVQNAIKEAKS
KNKNVVIIDTAGRLAIDEVLMKEVADIKAAVNPNEILFVVDSMTGQDAVNTAKAFNDRLN
FTGVVLTKLDGDTRGGAALSIKYTVNKPIKFVSSGEKMDTLDVFYPDRMAQRILGMGDIT
SLVEKAQAQFDEEQAKKLEKKIRKNQFDFEDFKQQLEQIKKMGNLKDLMGMIPGMGKAMK
DIEISDDSFKGVEAIINSMTPQERANPDLISQSRRLRIAKGSGKDIAEVNAFMKQFEQMK
QMMSMMNKMPMGKMMPGMGRR
NT seq
1326 nt
NT seq
+upstream
nt +downstream
nt
atgtttcagaatttaagtgaacgtttagagagtgcgtttaagaatataaaaggtgaaggc
cgtattaccgagctcaacattgccgctacggtgaaagatatccgtcgtgcccttgtggat
gccgacgtaaactataaaattgccaaagactttaccgatacagtgaaggataaggcacaa
ggttccaaggtgttgctggcggttaaccccggtcagcaaatggttaaaattgtgcaggat
gaactgacagaattaatgggcggcaccgaaagcgaacttgaactgaaaggtgctcctgca
gttattctcatcgccggtttacagggtagcggtaaaaccacgtttagcggaaaactcgct
aattacctcaaaacacagaaaggcaaatcgcctttgctggtagcggcagatatctaccgt
ccggcggcgatcgatcagttgacggttttggcggggcaaatcggtgttgatatttacagc
gaaagggagaacaaagatgccgttgccattgtacaaaatgccatcaaagaagcaaaatcg
aagaacaagaatgtagttattatcgatacggccggtcgcctggccattgatgaggtattg
atgaaggaagtagctgatattaaagctgctgtgaacccgaacgagatcctctttgtggtg
gatagtatgacggggcaagatgcggtgaacacagccaaagccttcaacgaccgactcaac
tttacgggagttgtgctcaccaaactcgatggtgatacccgtggtggtgcggcgctttcc
atcaaatacaccgtaaacaaacccatcaagtttgtgagcagtggcgaaaagatggatacg
ctcgatgtgttttaccctgatcgtatggcgcagcgaatcctcggcatgggtgacattact
tcacttgtggagaaagcgcaggcccagttcgacgaagaacaggctaagaaacttgagaaa
aagatccgcaagaaccagttcgactttgaagatttcaagcaacaactggagcagatcaag
aaaatgggcaacctgaaagacctgatgggcatgattcccggaatgggcaaagccatgaag
gatattgagatcagtgacgattcatttaaaggcgttgaagcgatcatcaattcaatgacc
ccgcaggaaagggcaaaccctgacctcatcagccaaagccgtcgtttgcgcatagccaaa
ggcagcggaaaagatattgccgaagtgaacgctttcatgaaacagtttgagcaaatgaag
caaatgatgagcatgatgaacaaaatgccgatgggcaagatgatgcctggtatgggccgc
cggtaa
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