Luteibacter aegosomatissinici: L2Y97_05065
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Entry
L2Y97_05065 CDS
T09055
Symbol
rpoB
Name
(GenBank) DNA-directed RNA polymerase subunit beta
KO
K03043
DNA-directed RNA polymerase subunit beta [EC:
2.7.7.6
]
Organism
laeo
Luteibacter aegosomatissinici
Pathway
laeo03020
RNA polymerase
Brite
KEGG Orthology (KO) [BR:
laeo00001
]
09120 Genetic Information Processing
09121 Transcription
03020 RNA polymerase
L2Y97_05065 (rpoB)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
laeo03021
]
L2Y97_05065 (rpoB)
03400 DNA repair and recombination proteins [BR:
laeo03400
]
L2Y97_05065 (rpoB)
Enzymes [BR:
laeo01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.6 DNA-directed RNA polymerase
L2Y97_05065 (rpoB)
Transcription machinery [BR:
laeo03021
]
Prokaryotic type
Bacterial type
RNA polymerase
Core subunits
L2Y97_05065 (rpoB)
DNA repair and recombination proteins [BR:
laeo03400
]
Prokaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TCR (transcription coupled repair) factors
DNA-directed RNA polymerase complex (RNAP)
L2Y97_05065 (rpoB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RNA_pol_Rpb2_6
RNA_pol_Rpb2_3
RNA_pol_Rpb2_1
RNA_pol_Rpb2_7
RNA_pol_Rpb2_45
RNA_pol_Rpb2_2
Motif
Other DBs
NCBI-ProteinID:
UPG95480
LinkDB
All DBs
Position
1142190..1146362
Genome browser
AA seq
1390 aa
AA seq
DB search
MTYSFTEKKRIRKDFGKRPPVLGVPNLLTIQTDSYKEFLQEHTNPKAREEKGLHAALKSV
FPISSYSGNAALEYVDYRLGEPAFDERECRNRGMTFGAPLRATVRLVIYDKDSPASKKAV
KYVKEQEVYMGEIPLMTDTGTFIINGTERVIVSQLHRSPGVFFDHDRGKTHSSGKLLFSA
RVIPYRGSWLDFEFDPKDALFTRIDRRRKLPVTVLLRALGYNNEEMLSIFFEHNVFHLGK
KGAVTLDLVAERLRGETLSFDLVVDGKVLVEAGKRITARHVRQLANEKIATLEVPDDYPV
GRIVAIDMIDKDTGEVIAAANDELTLEHLEHFRKAGIETVPTLYVNDLDRGAYISNTLRI
DNTRTQLEALVEIYRMMRPGEPPTKDAAQNLFYNLFFTFDRYDLSAVGRMKFNRRVGRKD
VIGPGVLYDHKYFSERKEEEAQRILAEQGETSDVLDVLRVLIDIRNGIGTVDDIDHLGNR
RVRSVGEMAENTFRIGLVRVERAVRERLSLAESEGLTPQELINAKPVAAAVKEFFGSSQL
SQFMDQNNPLSEVTHKRRVSALGPGGLTRERAGFEVRDVHPTHYGRVCTIETPEGPNIGL
INSLAVYARTNAYGFLETPYRKVENGKVTDKVDYLSAIEEGDHVIAQANSPLSKEGKFLE
DFVSCRFRGESELRPSAEINYMDVSPMQTVSVAAALVPFLEHDDANRALMGANMQRQAVP
TLRSQKPLVGTGIERAVARDSGVTVAAKRGGVIDQVDAARIVVRVNEAEVGDDDAGVDIY
TLTKYTRSNQNTNLNQRPLVNVGDVVAVGDTLADGSSTDLGELALGQNMLVAFMPWNGYN
FEDSILISERVVQEDRYTSIHIEEMTCIARDTKLGAEEITADIPNVGEQALARLDESGIV
YIGAEVKAGDILVGKVTPKGESQLTPEEKLLRAIFGEKASDVKDSSLRVPPGMDGNVIDV
QVFTRDGIEKDKRAKQIEETELKRIRKDLDDQFRILEGAIYARMRAQLVGKTAMSGPAGL
KRGAVIDDAYLDGLKKDDWFKINVKEEEVSEFLERAAEQVKRHKENFDKRFKEKQGKITQ
GDDLAPGVLKMVKVYLAVKRRIQPGDKMAGRHGNKGVVSMIVPVEDMPFSADGRPVDICL
NPLGVPSRMNIGQILEVHLGWAAKGLGHKITAMIEANEKPAKLREFLDEVYNHGNAGAEG
AVRHVDLASMSDAEIVQLADNLRDGVPMATPVFDGAEETEIKHMLKLAGLPESGQTVLFD
GRTGEAFDRPVTVGYMHMLKLNHLVDDKMHARSTGPYSLVTQQPLGGKAQFGGQRFGEME
VWALEAYGAAYTLQEMLTVKSDDVQGRNQMYKNIVDGNHEMAAGMPESFNVLVKEIRSLG
IDIELEELHK
NT seq
4173 nt
NT seq
+upstream
nt +downstream
nt
atgacctactcgtttaccgagaagaagcgcatccgcaaggatttcggcaagcggcccccc
gtgctgggcgtgcccaacctgctgacgatccagaccgactcgtacaaggaattcctccag
gagcacaccaacccgaaggcgcgtgaggaaaaaggcctccacgcggccctcaagtcggtg
ttcccgatctccagctactccggcaatgccgcgctggaatacgtcgactatcgccttggt
gagccggcgttcgatgagcgtgagtgccgcaaccgtggcatgaccttcggcgcgccgctg
cgtgccaccgtgcgcctggtcatctacgacaaggacagcccggcatcgaagaaggccgtg
aagtacgtgaaggagcaggaggtctacatgggcgaaattccgctcatgaccgataccggc
accttcatcatcaacggcaccgagcgcgtcatcgtctcgcagctgcaccgttcgccgggc
gtgttcttcgatcacgaccgtggcaagacccacagctcgggcaagctgctgttctccgcg
cgcgtcattccttatcgtggttcgtggctcgatttcgagttcgacccgaaggatgcgctg
ttcacccgtatcgaccgccgccgcaagctgccggtcacggtgctgctgcgcgcgctgggc
tacaacaacgaagagatgctcagcatcttcttcgagcacaacgtgttccacctgggcaag
aagggcgcggtcacgcttgacctcgtcgccgagcgcctgcgcggtgaaaccctctcgttc
gacctggtggtcgatggcaaggtgctggtggaagccggcaagcgcatcactgcgcgccac
gttcgccagctggccaacgagaagatcgccacgctcgaagtgccggacgactacccggtc
ggccgcatcgtcgcgatcgacatgatcgacaaggacaccggcgaagtcatcgccgctgcc
aacgatgagctcaccctcgagcacctcgagcacttccgcaaggccggtatcgaaaccgtg
ccgacgctgtacgtgaacgatctcgatcgcggtgcgtacatctcgaacacgctgcgcatc
gacaacacccgtacgcagctggaagccctggtcgaaatctaccggatgatgcgtccgggc
gagccgccgaccaaggatgccgcgcagaacctgttctacaacctgttcttcaccttcgat
cgctacgacctgtcggccgtgggccgcatgaagttcaaccgccgtgtcggccgcaaggac
gtcatcggcccgggcgtgctttacgaccacaagtacttcagcgagcgcaaggaagaggaa
gcccagcgcatcctcgccgagcagggcgaaacgtcggacgtcctcgatgtcctgcgcgtg
ctcatcgatatccgcaacggcatcggaacggtcgacgatatcgaccacctcggtaaccgt
cgcgtgcgttcggtcggcgaaatggcggagaacaccttccgcatcggtctcgtccgcgtc
gagcgcgcggtgcgcgagcgcctgtcgctggctgaatccgaaggcctgaccccgcaggaa
ctgatcaacgccaagccggtcgcggccgcggtgaaggagttcttcggttcgtcgcagctt
tcgcagttcatggaccagaacaacccgctgtcggaagtcacccacaagcgccgtgtttcg
gcccttggcccgggtggtcttacccgtgagcgcgccggctttgaagtccgcgacgtgcac
ccgacccattacggtcgcgtctgcaccatcgaaacgccggaaggcccgaacatcggcctg
atcaactcgctggccgtgtacgcccgcaccaacgcctacggcttcctcgagacgccgtac
cgcaaggtcgagaacggcaaggtcaccgacaaggtcgattacctctccgcgatcgaagag
ggcgaccacgtcatcgcgcaggcgaactcgccgctgtcgaaggaaggcaagttcctcgaa
gacttcgtctcctgccgcttccgtggcgagtccgagctgcgtccgtcggccgagatcaac
tacatggacgtctcgcccatgcagacggtgtcggtggcagcggcgctcgtgccgttcctc
gagcacgatgacgcgaaccgcgcactcatgggcgcgaacatgcagcgccaggccgttccg
accctgcgcagccagaagccgctcgtcggcacgggcatcgagcgcgccgtggcgcgtgat
tcgggcgtcaccgtggccgccaagcgtggtggtgtcatcgaccaggtcgatgccgcccgt
atcgtcgtgcgcgtcaacgaagccgaagtgggcgacgatgatgccggcgtcgatatctac
acgctgaccaagtacacccgttccaaccagaacaccaacctcaaccagcgcccgctggtg
aacgtgggtgacgtggtggccgtgggcgacacgctggccgacggttcgtcgaccgacctg
ggcgagctcgcgctcggccagaacatgctcgtcgcgttcatgccgtggaacggctacaac
ttcgaagactcgatcctcatctccgagcgcgtcgtgcaggaagatcgttacacctcgatc
cacatcgaggaaatgacctgcatcgcccgtgacacgaagctgggcgccgaggaaatcacc
gcggacatcccgaacgtcggcgagcaggccctggcccgcctcgacgaaagcggcatcgtc
tacatcggtgcggaagtgaaggcgggcgacatcctcgtcggcaaggttacgccgaagggc
gagagccagctcacgccggaagaaaagctcctgcgcgccatcttcggcgagaaggcctcg
gacgttaaggacagctcgctgcgcgtgcccccgggcatggacggcaacgtcatcgacgtg
caggtcttcacccgtgacggcatcgagaaggacaagcgcgccaagcagatcgaagagacc
gaactgaagcgtatccgcaaggatcttgacgaccagttccgcatcctcgaaggcgcgatc
tacgcccgtatgcgtgcgcagctcgtcggcaagaccgcgatgagcggcccggccggcctg
aagcgtggcgccgtgatcgacgacgcctacctcgatggcctgaagaaggacgactggttc
aagatcaacgtcaaggaagaggaagtctccgagttccttgagcgcgcggccgagcaggtc
aagcgccacaaggagaacttcgacaagcgcttcaaggagaagcagggcaagatcacccag
ggcgacgacctcgcaccgggcgtgctcaagatggtcaaggtctacctggccgttaagcgc
cgcatccagccgggtgacaagatggcaggccgccacggcaacaagggtgtcgtgtcgatg
atcgtgccggttgaggacatgccgttctccgccgacggtcgtccggtcgacatctgcctg
aacccgctgggcgtgccttcacgtatgaacatcggtcagattcttgaggttcacctgggc
tgggccgccaagggcctgggccacaagatcacggccatgatcgaagcgaacgagaagccg
gccaagctgcgcgagttcctcgacgaggtgtacaaccacggcaacgccggtgcggaaggc
gcggttcgccacgtcgatctcgcctcgatgtcggatgccgagatcgtccagcttgccgac
aacctgcgcgacggcgtgccgatggccaccccggtgttcgacggtgccgaagaaaccgaa
atcaagcacatgctgaagctggcaggcctgccggaatccggccagaccgtgctgttcgat
ggccgtaccggcgaggcgttcgatcgcccggtcaccgtcggctacatgcacatgctgaag
ctgaaccacctcgtcgacgacaagatgcacgcgcgttcgaccggtccgtactcgctcgtt
acccagcagccgctgggcggcaaggcgcagttcggcggccagcgcttcggcgaaatggaa
gtctgggcgctggaagcttacggcgcggcgtacaccctgcaggaaatgctgacggtcaag
tcggatgacgtgcagggccgcaaccagatgtacaagaacatcgtcgacggcaaccacgaa
atggctgcgggcatgccggaatccttcaacgtgctcgtgaaggaaatccgctcgctcggt
atcgacatcgagctcgaagagctccacaagtga
DBGET
integrated database retrieval system
