Roseibium aggregatum: B0E33_01875
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Entry
B0E33_01875 CDS
T04723
Name
(GenBank) uracil-DNA glycosylase
KO
K21929
uracil-DNA glycosylase [EC:
3.2.2.27
]
Organism
lagg
Roseibium aggregatum
Pathway
lagg03410
Base excision repair
Brite
KEGG Orthology (KO) [BR:
lagg00001
]
09120 Genetic Information Processing
09124 Replication and repair
03410 Base excision repair
B0E33_01875
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lagg03400
]
B0E33_01875
Enzymes [BR:
lagg01000
]
3. Hydrolases
3.2 Glycosylases
3.2.2 Hydrolysing N-glycosyl compounds
3.2.2.27 uracil-DNA glycosylase
B0E33_01875
DNA repair and recombination proteins [BR:
lagg03400
]
Prokaryotic type
SSBR (single strand breaks repair)
BER (base exicision repair)
DNA glycosylases
B0E33_01875
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
UDG
Motif
Other DBs
NCBI-ProteinID:
AQQ02496
LinkDB
All DBs
Position
complement(372032..372691)
Genome browser
AA seq
219 aa
AA seq
DB search
MSDYIADHGPVDPPSDCPACPRLVALREELKAAYPDWHNAPVPSFGADAPRLLIIGLAPG
MKGANCTGRPFTGDYAGDLLYQTMIEFGFAEGTYKARPDDGLQLKDAMITNAVRCLPPQN
KPTGAEIKTCRPYLLSTLDANPSIKAVLALGRIAHETFLSALDQRRASFAFAHGARHELP
GTGLTLFDSYHCSRYNTNTGRLTEEMFHSVFRQIRSFIP
NT seq
660 nt
NT seq
+upstream
nt +downstream
nt
atgtccgattatatcgcagaccatgggccagtcgatcccccatcagattgtccggcctgt
ccccgccttgttgccctgcgtgaagagctgaaagctgcctatcccgactggcacaacgcg
ccggttccgtcattcggagccgacgcgccgcgtcttctgatcatcggcctggccccgggc
atgaaaggggccaactgcacgggccgcccctttacaggggactatgcgggagatctcctc
taccagaccatgatcgaattcggttttgccgaagggacctataaggcccggccggacgac
ggtctgcagttgaaggatgcgatgatcaccaacgcggtgcgctgcctgccgccgcagaac
aagccaaccggcgcggaaatcaagacctgccgcccgtatcttttgtcgacgctggatgcc
aatccgtcgatcaaggctgtgcttgctctcggccggatcgcgcatgagacatttctgtcg
gccctggatcagcgtcgggcatctttcgcctttgcccacggcgcaaggcatgagcttccc
ggaactggactgacgcttttcgacagttatcactgctctcgctacaacaccaacacaggc
cgcctcaccgaggaaatgttccactcggtcttcaggcagatccgctcgtttattccttag
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