Lingula anatina: 106151197
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Entry
106151197 CDS
T04921
Name
(RefSeq) U6 snRNA-associated Sm-like protein LSm4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
lak
Lingula anatina
Pathway
lak03018
RNA degradation
lak03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lak00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
106151197
09123 Folding, sorting and degradation
03018 RNA degradation
106151197
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lak03019
]
106151197
03041 Spliceosome [BR:
lak03041
]
106151197
Messenger RNA biogenesis [BR:
lak03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
106151197
mRNA degradation factors
5'-3' decay
Lsm complex
106151197
Spliceosome [BR:
lak03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
106151197
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
LSM
Motif
Other DBs
NCBI-GeneID:
106151197
NCBI-ProteinID:
XP_013379763
UniProt:
A0A1S3H179
LinkDB
All DBs
Position
Unknown
AA seq
140 aa
AA seq
DB search
MLPLSLLRTAVNHPMLVELKNGETYNGHLVSCDNWMNINLREVICTSRDGDRFWRMPECY
IRGSTIKYLRIPDEVIDMVKEEVIQKSSRGRGDMKGRGGGQRGRGGPGRGAFGGRGGGRG
GRGGGPGGPPKNMGKGRGTK
NT seq
423 nt
NT seq
+upstream
nt +downstream
nt
atgttacctctttctctactgcgaactgctgtgaaccatcccatgctggtggagttaaaa
aatggagagacatacaatggacatttagtaagctgtgacaactggatgaatattaatctc
agagaagttatctgcacatccagggatggtgacaggttctggagaatgccagaatgttat
atcagaggcagcacaatcaaataccttaggatacctgacgaagtgatagacatggtgaag
gaggaagttatccaaaagtcgagcagaggtcgtggtgacatgaaaggtcgcggaggaggt
caaaggggtagaggaggaccaggaagaggggcatttggaggaagaggaggaggtagagga
ggaagaggaggaggaccaggaggaccaccaaagaatatgggaaaaggaagggggactaaa
taa
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