Lingula anatina: 106153256
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Entry
106153256 CDS
T04921
Name
(RefSeq) pre-piRNA 3'-exonuclease trimmer
KO
K01148
poly(A)-specific ribonuclease [EC:
3.1.13.4
]
Organism
lak
Lingula anatina
Pathway
lak03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lak00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106153256
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lak03019
]
106153256
Enzymes [BR:
lak01000
]
3. Hydrolases
3.1 Acting on ester bonds
3.1.13 Exoribonucleases producing 5'-phosphomonoesters
3.1.13.4 poly(A)-specific ribonuclease
106153256
Messenger RNA biogenesis [BR:
lak03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Other 3'-5' decay factors
106153256
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
CAF1
RNA_bind
Motif
Other DBs
NCBI-GeneID:
106153256
NCBI-ProteinID:
XP_013382568
UniProt:
A0A1S3H980
LinkDB
All DBs
Position
Unknown
AA seq
538 aa
AA seq
DB search
MCDVLRSNFEDEFPRIEEAINRAKFIAIDSEFTGLRINNKVRPSLFDDGAQRYGQLKSGV
SQFQICQFGVSAFVKEENENKYTAYTFNFHIFPSSFGPIDPRFMCQVSSLEFLCTFNFDF
NKFIYEGVPFLNRMQEQQLRSILRNQSLFDGQERDVDEDALQKACSEVAEWVVEAKDGDT
KLINRPKRVADFILHEELLQRFDNIWPERQAQLNPVILVTKVPVGQRKKLEDMNENSQEY
QEERMVNLLKGFSRVIDLISNSKKPLIGHNMLLDLMLIHDKFYLPLPDDYLTFKKNIHQL
FPCIIDTKHFSSEIRKSVEDSGLLKSTSLGTLYEEMDSDLGKGIVLCQPAIHHAPGYRKY
VDGTAYHEAGFDSFAAGYVFLRMCHMHSLYGLSSMQAAPLEFSHYMTKTKPFHNNINMIR
AAIDHICLDGADPPSRRPQWLHVQSRTYKLKTVKLARLFSSHGSVDIKMLGERKALVAVA
NYRVAKDILKSFHNHEQIKVAKYNIWRHSPVVRGVMWTGLALSGGICLWALFSSQKKD
NT seq
1617 nt
NT seq
+upstream
nt +downstream
nt
atgtgtgatgtactgaggtcaaattttgaagacgagttccctcggatagaagaagctata
aatagagcgaaatttatagctattgactctgaatttacaggcctgagaatcaacaacaaa
gtcagaccaagtctgtttgatgatggagcacaacgctatggtcaattaaagagtggtgtc
agtcaattccagatatgtcagtttggagtgtctgcatttgtcaaagaagaaaatgaaaac
aagtatacagcttatacattcaacttccacatttttccttcttcatttggaccaattgac
ccaaggttcatgtgtcaggtgtcgagtttagaattcttgtgtacattcaattttgacttt
aataagttcatatatgaaggtgtgccgtttctaaacaggatgcaagagcaacaactaagg
agtattcttagaaaccaatcactatttgatggacaggaacgagatgtggatgaagatgct
ctgcagaaggcatgttctgaggttgcagagtgggtggtagaagcaaaagatggagacacc
aaactcataaataggccaaaaagagttgcagattttattttgcatgaagaattacttcag
cggtttgacaacatatggccagagagacaagcccagctgaatcctgtgatattagtaaca
aaagtaccagtgggacaaaggaaaaagctagaagacatgaatgaaaattcacaagagtac
caagaggaaagaatggttaatttattaaagggtttctctcgagtgattgatcttatatca
aactctaaaaagccactcataggacacaacatgcttttagacttaatgctcatccatgat
aagttttacctacctttgcctgatgattatcttactttcaagaagaatattcatcaactt
ttcccttgtatcatagacacaaagcatttttcttcagaaatacgaaagtctgttgaggat
agtggtttattaaaaagcacaagtttaggaacgttgtatgaagaaatggatagtgatttg
ggaaaaggaatagttctgtgtcaacctgccattcaccatgcaccaggatacaggaaatat
gtcgacgggactgcctaccatgaagcaggatttgactcctttgctgcaggatatgttttt
ctacggatgtgccacatgcattcactatatggactttcgtccatgcaggctgcccctcta
gaattcagtcattacatgaccaagaccaaacctttccacaataatatcaacatgattaga
gcagccatagatcatatatgtttagatggtgctgatcctccatctagaaggccacaatgg
ttgcatgtgcaaagcaggacatataaactgaaaactgttaagttggcaagattgttctct
tcccatggatctgtggacatcaagatgttaggagaaaggaaggccttggtagcagtagca
aattacagagtagccaaagatattctgaaatcattccacaaccatgaacagattaaggta
gccaaatacaacatatggaggcattctcctgtggtcagaggagttatgtggactggccta
gcactgtcaggtggaatttgtctatgggctttattctccagtcaaaagaaagattaa
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