Lingula anatina: 106171390
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Entry
106171390 CDS
T04921
Name
(RefSeq) tetratricopeptide repeat protein 37 isoform X1
KO
K12600
superkiller protein 3
Organism
lak
Lingula anatina
Pathway
lak03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lak00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106171390
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lak03019
]
106171390
Messenger RNA biogenesis [BR:
lak03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
106171390
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
TPR_2
TPR_1
TPR_16
TPR_14
TPR_CcmH_CycH
TPR_19
TPR_8
TPR_17
TPR_11
TPR_12
TPR_9
ANAPC3
ARM_TT21_5th
COG4_N
TPR_COPA_B
TPR_15
Fis1_TPR_C
PknG_TPR
Motif
Other DBs
NCBI-GeneID:
106171390
NCBI-ProteinID:
XP_013407175
UniProt:
A0A1S3JAF0
LinkDB
All DBs
Position
Unknown
AA seq
1537 aa
AA seq
DB search
MDAKELKQTLKNAREAIRNKDYKEALKHCKAILKVDKTNYNALVFVGVAAEGLEQPEQAL
SAYKKATDSAPDQLLAWQGLCNFYEKNDKAEYKDDMLQVYEKLMALYESDFEKKFETGYK
LCDVYDGRGDFLKAVEIGQSLLKCCQEDGRKTLNVYKKLVKILESKKNLPDDLFELLHVA
CEKIVHSPPDGSEKDLESIWKIYINGLIQKTSESAIVIEKCKAMAKLFPKSAFPLEVQCQ
IMMNSFSAEFDVKDICDISMKLEELSGSTPMAILARGWTSYYSSDFKEARALLLEGVGMG
SQSIPAGAWLLLARSQLKLHDNMGVVETSERAKKILKKEATNKHAALIREILLCQAAALL
ELGKDTHLVQAKELVQEVISKDSTCTTAKELLCYIVLAEGDLDQAQKLCMGFSDSSSASM
LALEGWCLFVAGQLEEANTKLTKAVELSAGEDGKILYQLARVQWKQGTCHKEALTNFLKA
AKVDPYYSQPFLYLGHHYAQAGDQVKARRCYQKSFDLDSNNDEAGAAFVDILNSLGEEDG
ALAVLSRVTAAASAGSVKWAWMRLGLHQLKHMEPTAAIASFQCALRADSNDRHCWECLAE
AYATRGSYTAALKAFTKVAEMSEDNMYGLYQIASIKQTLGLYAEAVLEYRAILTKSPDYV
PALKGLGEAYVHLARDSLKQVFSGRAVDQCQEAIHHLTRAASFRPDLSCVWKLMGDACTL
IHVVAAERVSMRVPGMLLEKGKSAESEHLSKAQVLTLGARCYGRALKLLPECSTLWQDLG
LNYYRQNQATVDLQVKKATMDKAVQALKRAVSLDPRNHKHWTSLGVVAADMVVGDSALAQ
HCFIQSLKAEQNNVVAWTNLGTLYFNNGQVELAHEAFKSAQSLDPGYVACWIGQAMIAET
VGHEDAMDLYRHTTELGHHLEGSIGYANWVCRTLEDKSNRDSEVFKFSIVQMDAIPAACD
ALAKYTDLVCTNPAAYMMYGLLLERQGLYKLAAQAMGNAVKLIDFVQDQDKRNVIHSNYA
RVLCHVDQATEAVAQYQLIQPLNRYEDVCGLALALYRSGQLTESYQAYDQALHLAPNAEE
KSHVFAAMGMVAYKVKDLDTAKTVLFQGSQCSPPSKLGLKALCSLGLIEGDVTLSAAVLQ
EIPQLEEDADMLTDITWLTAALALLQGKAKAGRNLILKAVHKNPTSKELWKLASKYLLQF
LPSACGGATACASEVHDELTGKNKLPMYRALGCLAKGLHSRVDCHKNALKVAQKALHLQP
DKLEHHIVLLSAMYAEKMIRQDPESLSFHSAYWEFVLCWVEKALEEDNTSEEMEMSVLHR
WCLKQNVLNLLLFGRKEDTIDILKKALEMYGTDDLLGSLALYADNNMAALQQSLLQAPNN
WLGWQLLTTSYLTQGLIENVEVIYKQFLEVSDSSHKLHCAIQLAHLSFTQLLKEGASDKW
GSLCQDALGEAFKLDPQCIPANLMQGILLMKGKNPRQAKRYFHSVLQASSVTNLASRIAR
RLLLPIYKAKNDTEHLEELKVQANLEKDMEFLKICNK
NT seq
4614 nt
NT seq
+upstream
nt +downstream
nt
atggatgcaaaggagctcaagcaaacattgaaaaatgccagagaggctatccgcaacaag
gactacaaagaagccctcaaacattgcaaggccatcctgaaagtagacaagaccaattac
aatgccctagtgtttgtgggggtggcagcagagggactagagcagccagaacaagctctg
tctgcatataagaaggccacagatagtgctccggatcagctcctagcatggcagggactt
tgtaatttctatgaaaaaaatgacaaggcagaatacaaagatgatatgcttcaagtttat
gagaaattaatggctttatatgagagtgattttgaaaagaagttcgaaactggatacaaa
ttgtgtgatgtgtatgatgggagaggtgactttctcaaggcagttgaaataggacagagc
ctattgaaatgttgccaggaagacggtagaaaaactcttaatgtctacaaaaaactggtc
aagattttagaatcgaagaagaatttgccagatgatttgtttgagttgctgcatgttgct
tgtgaaaaaattgtccattcaccaccagatggaagtgagaaagatttggagtccatatgg
aaaatctacattaatgggcttatacaaaaaacttcagagagtgcaattgtgatagagaag
tgcaaagccatggcaaaactatttccaaagtctgcatttcctttagaagtacagtgccag
attatgatgaatagcttttcagctgaatttgatgtgaaggacatttgtgacatcagcatg
aagttggaggaactgtcaggttcaacaccgatggcaatccttgcaagaggatggacttct
tattacagcagcgattttaaagaagcaagggctcttctactggagggtgtaggtatgggc
agtcagagtatcccagcaggggcatggttactgttagctaggtcccagctaaaactgcat
gataacatgggtgtggtggaaacaagtgagagagccaagaaaattcttaaaaaagaagca
acaaataaacatgctgcattgattagagaaattttactctgccaggcagcagcattactg
gaactaggcaaggatactcatttagtgcaggccaaggagttggtacaagaggtcatatcc
aaagattctacctgtaccacagctaaagagctcctttgttatattgtactggcagaggga
gatttggatcaagcacaaaagctgtgtatggggttttctgattcctccagtgcctccatg
ttggctctagaaggatggtgtctgtttgttgctggtcagctggaggaagccaatactaaa
ttgactaaagcagtggaactttcagctggggaggatggcaaaattctgtaccagctggct
agagtccagtggaagcaggggacctgccacaaggaggcactgactaacttcctcaaggca
gcaaaagtagacccttactacagtcagccatttttatacctagggcatcactatgcacag
gcgggagatcaagtaaaagccagacgttgctatcagaaatcatttgaccttgacagcaac
aatgacgaagctggggctgcttttgttgacattttgaattctcttggagaagaggatggt
gctctggctgtattatcaagagtgacagcagcagccagtgctggcagtgtaaagtgggcc
tggatgagattaggcttgcaccaactgaaacacatggaacccacagctgccatagcctca
tttcagtgtgcactcagagcagattctaatgatagacattgttgggagtgtcttgcagag
gcttatgccaccagagggagctatacagcagcgctaaaggcattcacaaaggttgctgag
atgtcagaggacaacatgtacggtctataccagattgcctctatcaagcagaccctggga
ctatatgcagaggctgttctggagtacagggctatcctgaccaagtcaccagactatgtg
cctgcattgaaaggtctaggtgaagcttatgtccatcttgcaagggactcactgaagcag
gttttctctggccgggcagttgaccagtgtcaggaggccattcaccacttgaccagagct
gcctcattcagaccagacctgtcatgtgtgtggaaactgatgggagatgcctgtactctg
atccatgtggtggcagcagagcgggtcagcatgagagtcccaggcatgttgttggagaaa
ggaaagagtgcagaatcagagcatttgagtaaagcacaagttcttaccctaggtgccagg
tgttatggacgggcactgaaactgctgccagaatgctccaccttgtggcaggacttggga
ctaaattactacagacagaatcaggccacagttgacctccaggtcaaaaaggcaacaatg
gacaaagcagtccaggcactgaagagagctgtcagtttagaccctagaaaccacaaacac
tggacatcacttggtgtggtggcagcagatatggtggtaggtgattctgctctggctcag
cactgctttatccagtctctgaaggcagaacagaataatgttgttgcttggacaaacctt
ggaacattgtatttcaacaatggtcaagtagagcttgcccatgaagccttcaagtctgcc
cagtctctagaccctggttatgtggcatgctggattggacaggcaatgatagcagagaca
gtggggcatgaagatgccatggatctctacagacacacaactgaactgggacaccatctt
gagggaagtattgggtatgctaattgggtgtgtcgcacactggaggataagagtaacaga
gattctgaggtgttcaagttttcaattgtgcaaatggatgccattccagcagcatgtgat
gctttggcaaaatacacagatctggtgtgtaccaatccagcagcttatatgatgtatgga
ttgctgttggagagacaggggctatataagctggcagctcaggcaatggggaatgctgta
aaactgatagactttgtacaggatcaagataaaagaaatgtcattcacagcaactatgct
agggttttatgtcatgtggatcaagctacagaagccgttgcccagtatcagctaatacaa
ccattgaatagatatgaagatgtgtgtggcctggctttggcactctacagaagtggacaa
ctgacagagagctaccaagcctatgaccaggcattgcacttggcccccaatgctgaagag
aagtcgcatgtgtttgctgccatggggatggtggcatataaggtcaaggacttagatact
gccaagacagttctattccaagggtcccagtgcagccctccctcaaagcttggcctgaag
gctctgtgtagcctaggtcttatcgagggagatgtcactctcagtgctgctgtgttacag
gagataccacagctggaggaggatgctgatatgttgactgatatcacctggctgacagca
gctctagctctgctacagggcaaagccaaggctgggagaaaccttatcctgaaggctgtc
cataaaaacccaacatcaaaggagttgtggaagctggcaagcaaataccttctgcagttt
ttgccatctgcctgtggtggcgccactgcttgtgcctctgaggtccatgatgagctgaca
gggaaaaataagctgccaatgtacagagcccttggctgcttggcaaaaggattgcattca
agagttgactgtcacaagaatgctttgaaagtagcacagaaagcattgcatctccaacca
gataaactagagcatcacatagtcctgctgtctgctatgtatgctgagaagatgatcagg
caagacccagagtctctgtcctttcattcagcttactgggagtttgtactgtgttgggtg
gaaaaggcgttagaggaagacaataccagtgaagagatggagatgtcagtccttcacaga
tggtgtttaaaacaaaatgttcttaatcttttgttatttggacgaaaagaagacacaatt
gatatactaaaaaaggccctggaaatgtatggaaccgatgatttgcttggctccctggca
ttgtatgctgacaacaacatggcagcactacaacagtctttgcttcaggccccaaataac
tggctaggctggcagctactgaccaccagctacctaacacaaggtttgatagagaatgtg
gaggtaatctacaaacagtttctggaagtgtcagattccagccacaaacttcactgtgcc
atccagttggcccacttgtcgtttacacagttacttaaagagggcgctagtgacaagtgg
gggtcactgtgccaagacgcccttggtgaagccttcaagttggacccacaatgcattcct
gcaaatcttatgcaagggattttattgatgaagggaaagaatcccagacaagccaagaga
tactttcattctgtgctgcaggcttcaagtgtaaccaacctggcttccaggatagccagg
cgtctgctactgccaatatacaaagccaagaatgatacagaacatttagaggaactcaag
gtccaggcaaatcttgaaaaagatatggaatttctaaagatatgtaacaagtga
DBGET
integrated database retrieval system
