Lingula anatina: 106172806
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Entry
106172806 CDS
T04921
Name
(RefSeq) uncharacterized protein LOC106172806
KO
K03654
ATP-dependent DNA helicase RecQ [EC:
5.6.2.4
]
Organism
lak
Lingula anatina
Pathway
lak03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lak00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
106172806
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lak03019
]
106172806
03400 DNA repair and recombination proteins [BR:
lak03400
]
106172806
Enzymes [BR:
lak01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.4 DNA 3'-5' helicase
106172806
Messenger RNA biogenesis [BR:
lak03019
]
Prokaryotic type
Bacterial mRNA degradation factors
RNA degradosome components
Helicases
106172806
DNA repair and recombination proteins [BR:
lak03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHDIR (short-homology-dependent illegitimate recombination)
Supressor
106172806
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C
DEAD
RecQ_Zn_bind
AAA_14
Motif
Other DBs
NCBI-GeneID:
106172806
NCBI-ProteinID:
XP_013409162
UniProt:
A0A1S3JFH1
LinkDB
All DBs
Position
Unknown
AA seq
389 aa
AA seq
DB search
MIVLVVSPLNSLIQDQISNLRRVGIAACTINISGTKGMTYNEAGGDEVSSDDEEGNNLED
RAVLECDVPFDMIEKGAYKIIYAHPETFQKTKFAQVIRRKVYQELVCAVVIDEVHMISEW
GDDFRPAFKKLGELICVFDGSRHLVLTATATPAAVKSLVKLLNFKDHVVVSANVDRPNIY
IEICKRLPNIHKFEKLDGIIQPIAEELKEKQHDFPVTIINVDNLESLGYFYQFVSYHLQE
KGYKGEQIPQNRIFGQYHKDYPDDMKQLIIGELVKPNPTIRLVMATVALGMGINAPSVER
IIHSRPPTTLEKYQQEIGRAGRAGQPAHAIMYYNNSDIAKNRKGLSDVMAQFCKQDGCYR
RTLVNYFGFDEVLYKGERHNCCSNCRGSS
NT seq
1170 nt
NT seq
+upstream
nt +downstream
nt
atgatcgtcttggtggtttccccactaaactccctaatacaagaccagatttcaaatttg
agaagagtaggcatagctgcgtgtactatcaatatatcaggtacaaaaggaatgacatat
aatgaagctggcggtgatgaagtttctagtgacgatgaggaaggaaacaatttggaagac
agggcagtcctggaatgtgatgtgccgtttgacatgattgaaaagggtgcctacaaaata
atatatgctcatccggagacattccaaaaaacaaagtttgctcaagttattagaaggaaa
gtgtatcaagaacttgtctgtgcggttgttattgacgaagttcatatgatatctgaatgg
ggagatgactttcgtccggcctttaaaaagcttggtgagcttatttgtgtgtttgatgga
agcagacatctggtattaacagctacggcaacacctgcagcagtaaagagcctagtcaag
ttactcaactttaaagatcatgtcgtagtctccgctaatgttgatagacccaacatctac
atcgaaatctgcaaaagattaccaaacattcataagtttgaaaagctagatggaataatt
cagccaatcgctgaagaactgaaggaaaaacaacacgatttcccagttactataattaat
gtggataacttggagtcattaggatatttctaccagtttgtttcataccatctacaagaa
aagggctacaaaggtgaacagattccacaaaatcgaatctttggacaatatcacaaggat
taccccgatgacatgaaacagttaattattggagaactagtgaaaccaaatcccactata
cgtcttgttatggccacagtggctcttggtatgggcattaatgcgccaagtgttgaaagg
ataatacactctcggccacccacaacattagaaaagtatcaacaagagatagggcgtgct
ggtagagctggtcaacctgcccatgccatcatgtattacaacaacagtgatattgctaaa
aataggaaaggtttgtctgatgtaatggctcaattttgtaaacaggatggctgctacagg
aggacactagtgaattactttggatttgatgaagttttatacaaaggagaaaggcacaac
tgttgttcaaattgtagaggtagcagctaa
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integrated database retrieval system
