KEGG   Lingula anatina: 106177191
Entry
106177191         CDS       T04921                                 
Name
(RefSeq) replication factor C subunit 4
  KO
K10755  replication factor C subunit 2/4
Organism
lak  Lingula anatina
Pathway
lak03030  DNA replication
lak03410  Base excision repair
lak03420  Nucleotide excision repair
lak03430  Mismatch repair
Brite
KEGG Orthology (KO) [BR:lak00001]
 09120 Genetic Information Processing
  09124 Replication and repair
   03030 DNA replication
    106177191
   03410 Base excision repair
    106177191
   03420 Nucleotide excision repair
    106177191
   03430 Mismatch repair
    106177191
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03032 DNA replication proteins [BR:lak03032]
    106177191
   03036 Chromosome and associated proteins [BR:lak03036]
    106177191
   03400 DNA repair and recombination proteins [BR:lak03400]
    106177191
DNA replication proteins [BR:lak03032]
 Eukaryotic type
  DNA Replication Elongation Factors
   RFC (replication factor C)
    106177191
  DNA Replication Termination Factors
   ELG1-RFC complex
    106177191
Chromosome and associated proteins [BR:lak03036]
 Eukaryotic type
  Sister chromatid cohesion proteins
   CTF18-RFC complex
    106177191
DNA repair and recombination proteins [BR:lak03400]
 Eukaryotic type
  SSBR (single strand breaks repair)
   MMR (mismatch excision repair)
    RFC (replication factor C)
     106177191
  Check point factors
   HRAD17(Rad24)-RFC complex
    106177191
SSDB
Motif
Pfam: Rep_fac_C AAA DNA_pol3_delta2 Rad17 RCF1-5-like_lid AAA_assoc_2 AAA_22 AAA_11 AAA_16 AAA_lid_RFC1 DUF815 AAA_30 SLFN-g3_helicase RuvB_N Mg_chelatase AAA_14 Kinesin AAA_24 ResIII AAA_19 bpMoxR AAA_7 AAA_28 Microtub_bd AAA_5 DNAX_ATPase_lid
Other DBs
NCBI-GeneID: 106177191
NCBI-ProteinID: XP_013415351
UniProt: A0A1S3JZ97
LinkDB
Position
Unknown
AA seq 364 aa
MHAFLKGGTLGSATSSAKEKDKGSTSGKQSKQTKKHMPWVEKYRPKTVEEVAHQEEVVAV
LKKSLQGVDLPNLLFYGPPGTGKTSTILAAARELYGPEMFKTRILELNSSDERGINVIRE
KVKNFAQLTASGQRPDGKPCPPFKIIILDEADSMTGPAQAALRRTMEKESKTTRFCLICN
YVSRIIEPITSRCAKFRFKPLASDVLQTRLREIAELESVKISDEAISALEAVSEGDMRKA
ITFMQSVARLKREEEITEKDIFEIAGVIPNDIIDDLLRVCHSDSYEKLEAFVKEIMLEGH
SAYQIITQLHELLVVHPELGDKQKSVILEKLAIVDKCLSDGADEYLQIMGLCTTIMQQIC
HGEK
NT seq 1095 nt   +upstreamnt  +downstreamnt
atgcatgcctttctgaaaggagggaccttaggctctgcgacttctagtgccaaagaaaag
gacaaagggagtacctcaggaaagcagtccaagcaaaccaagaagcacatgccatgggtg
gaaaaataccgtcccaaaacagtggaggaggtagctcaccaagaagaagtggttgcagtg
ttgaagaagtctttacaaggagtagatctgccaaatctgttattctatggtcctccggga
acaggaaagacatcaaccatactggctgctgccagggaattgtatggccctgagatgttt
aagaccaggattctagaactgaactcttcagatgagcgtggcattaatgtcatacgtgaa
aaagtgaagaactttgcacagctgactgccagtggacaaagaccagatgggaaaccttgt
ccaccattcaagataattattttagatgaagcagactctatgacagggccggcacaggca
gccctgagaaggacaatggagaaggaatccaaaacaaccaggttttgtctgatctgtaat
tacgtcagtcgtattatagaacccatcacatccaggtgtgccaagttcaggttcaaacca
ctggccagcgacgtgctgcagacaagattgagggaaattgcggaattagaaagcgttaaa
atatctgatgaggcaatctcagcattggaagctgtatctgaaggtgacatgaggaaagcc
attacttttatgcagagcgtggcaaggttaaaaagagaagaggaaataacagaaaaagat
atttttgaaattgctggggtgattccaaatgatataatagatgatttattgagggtttgt
cactcagactcttacgaaaaactcgaggcatttgtaaaggaaataatgttagaagggcac
tctgcgtaccaaatcatcacacagttacatgaacttctagtggtgcacccagaactcggg
gacaaacaaaagtctgtcatcttggaaaaactagcaattgttgacaaatgtctaagtgat
ggagcagacgagtaccttcagatcatgggactttgtaccaccatcatgcagcagatatgt
cacggagagaaataa

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