Lagenorhynchus albirostris (white-beaked dolphin): 132518322
Help
Entry
132518322 CDS
T10760
Symbol
TNPO1
Name
(RefSeq) transportin-1
KO
K18752
transportin-1
Organism
lalb Lagenorhynchus albirostris (white-beaked dolphin)
Pathway
lalb03013
Nucleocytoplasmic transport
Brite
KEGG Orthology (KO) [BR:
lalb00001
]
09120 Genetic Information Processing
09122 Translation
03013 Nucleocytoplasmic transport
132518322 (TNPO1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lalb03019
]
132518322 (TNPO1)
03009 Ribosome biogenesis [BR:
lalb03009
]
132518322 (TNPO1)
Messenger RNA biogenesis [BR:
lalb03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
Common to processing body (P body) and stress granule
132518322 (TNPO1)
Ribosome biogenesis [BR:
lalb03009
]
Eukaryotic type
Pre-40S particles
Export and cytoplasmic maturation factors
132518322 (TNPO1)
Pre-60S particles
132518322 (TNPO1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HEAT_EZ
HEAT
HEAT_2
HEAT_GCN1
Arm
TPR_IMB1
Vac14_Fab1_bd
IBN_N
TOR1L1_N
HEAT_EF3_N
TPR_IPO5
Cnd1
HEAT_MROH2B_C
TPR_DNAAF5
PDS5
MMS19_C
Adaptin_N
HEAT_GCN1_C
HEAT_DAAF5
HEAT_Maestro
Ltn1_1st
HEAT_GCN1_C_2
UNC45-central
TPR_TTI1_C
INTS7_N
Dopey_N
RTP1_C1
ARM_TBCD
Motif
Other DBs
NCBI-GeneID:
132518322
NCBI-ProteinID:
XP_060002297
LinkDB
All DBs
Position
3:56819771..56905667
Genome browser
AA seq
843 aa
AA seq
DB search
MVWDRQTKMEYEWKPDEQGLQQILQLLKESQSPDTTIQRTVQQKLEQLNQYPDFNNYLIF
VLTKLKSEDEPTRSLSGLILKNNVKAHFQNFPNGVTDFIKSECLNNIGDSSPLIRATVGI
LITTIASKGELQNWPDLLPKLCSLLDSEDYNTCEGAFGALQKICEDSAEILDSDVLDRPL
NIMIPKFLQFFKHSSPKIRSHAVACVNQFIISRTQALMLHIDSFIENLFALAGDEEPEVR
KNVCRALVMLLEVRMDRLLPHMHNIVEYMLQRTQDQDENVALEACEFWLTLAEQPICKDV
LMRHLPKLIPVLVNGMKYSDIDIILLKGDVEEDETIPDSEQDIRPRFHRSRTVAQQHDED
GIEEEDDDDDEIDDDDTISDWNLRKCSAAALDVLANVYRDELLPHILPLLKELLFHHEWV
VKESGILVLGAIAEGCMQGMIPYLPELIPHLIQCLSDKKALVRSITCWTLSRYAHWVVSQ
PPDTYLKPLMTELLKRILDSNKRVQEAACRSAEYIQMLMPPLIQKWNMLKDEDKDLFPLL
ECLSSVATALQSGFLPYCEPVYQRCVNLVQKTLAQAMLNNAQPDQYEAPDKDFMIVALDL
LSGLAEGLGGNIEQLVARSNILTLMYQCMQDKMPEVRQSSFALLGDLTKACFQHVKPCIA
DFMPILGTNLNPEFISVCNNATWAIGEISIQMGIEMQPYIPMVLHQLVEIINRPNTPKTL
LENTAITIGRLGYVCPQEVAPMLQQFIRPWCTSLRNIRDNEEKDSAFRGICTMISVNPSG
VIQDFIFFCDAVASWINPKDDLRDMFCKILHGFKNQVGDENWRRFSDQFPLPLKERLAAF
YGV
NT seq
2532 nt
NT seq
+upstream
nt +downstream
nt
atggtgtgggaccggcaaaccaagatggagtatgagtggaaacctgacgagcaagggctt
cagcaaatcctgcagctgctgaaggagtcccagtcccccgacaccaccatccagagaacc
gtgcaacaaaaactggaacaactcaatcaatatccagactttaacaactacctgattttt
gttcttacaaaattaaaatctgaagatgaacccacaagatctttgagtggtctaattttg
aagaataacgtgaaagcacactttcagaacttcccaaatggtgtaacagactttattaag
agtgaatgtttaaacaatatcggtgactcctctcctttgattagagctactgtaggtatt
ttgattacaactatagcctccaagggagaattgcagaattggcctgacctcttaccaaaa
ctctgtagcctgttggattctgaagattacaacacttgtgaaggagcatttggtgccctt
cagaagatttgtgaagattctgctgagattttagatagtgatgttttagatcgtcctctc
aacatcatgattcctaaatttttacagttcttcaagcacagtagtccaaaaataaggtct
catgctgttgcctgtgtcaatcagtttatcatcagtagaactcaagctctgatgttgcat
attgattcctttattgagaatctctttgcattggctggtgatgaagaaccagaggtacgg
aaaaatgtgtgccgggcacttgtgatgttgcttgaagttcgaatggatcgcctgcttcct
cacatgcataatatagttgagtacatgctgcagaggacccaagatcaagatgaaaatgtg
gctttagaagcctgcgaattttggctcactttggctgagcagccaatatgcaaagatgta
ctcatgaggcatcttcccaagttgattcctgtgttagtgaatggcatgaagtactcagat
atagatatcatcctacttaagggtgatgttgaagaagatgaaacaattcctgatagtgaa
caggacataaggccacgttttcatcgatcaaggacagtggctcagcagcatgatgaagat
ggaattgaagaggaagatgatgatgacgatgaaattgatgatgatgatacaatttctgac
tggaatctaagaaaatgttctgcggctgccctagatgttcttgcaaatgtgtatcgtgat
gagcttttgccacatattttgccccttttgaaagaattactttttcatcatgaatgggtt
gttaaagaatcaggcatattggttttaggagcaattgctgaaggttgcatgcagggcatg
attccgtacctacctgagctcattcctcaccttattcagtgcctctctgataaaaaggct
cttgtgcgttccataacgtgctggactcttagccgctatgcacactgggtagtcagccag
cccccagacacgtacctgaagccattaatgacagaactgctaaagcgtatcctggatagc
aacaaaagagtacaagaagctgcctgcagatcagcagaatatattcagatgctaatgcct
ccactgatccagaaatggaacatgttaaaggatgaagataaagatctcttccctttactt
gagtgcctatcttcagttgccacagccctgcagtctggcttccttccatactgtgaacct
gtgtatcagcgttgtgtaaacctagtacagaagactcttgcacaagcaatgctgaacaat
gctcaaccagatcagtatgaggctccagataaagattttatgatcgtggctcttgactta
ctcagtggcctggctgaaggacttggaggcaacattgagcagctagtagcccgaagtaac
attctaacactaatgtatcagtgcatgcaggataaaatgccagaggttcgacagagttcc
ttcgccctgttaggtgatctgacaaaagcttgctttcagcatgttaagccttgtatagct
gatttcatgccaatattgggaaccaacctaaatccagagttcatttcagtctgcaataat
gctacatgggcaattggagaaatctccattcaaatgggtatagagatgcagccttatatt
cctatggtgttgcaccagcttgtagaaatcattaacagacccaacacaccaaagacgttg
ttagagaatacagcaataacaattggtcgtcttggttacgtttgtcctcaagaggtggcc
cccatgctacagcagtttataagaccctggtgcacctctctgagaaacataagggacaat
gaggaaaaggattcagcatttcgtgggatttgtaccatgatcagtgtgaatcccagtgga
gtaatccaagattttatatttttttgtgatgctgttgcctcatggattaatccaaaagat
gatctgcgagacatgttctgtaagatccttcatggatttaaaaatcaagttggggatgaa
aattggaggcgtttctctgaccagtttccgcttcccttaaaagagcgtcttgcagctttt
tatggtgtttaa
DBGET
integrated database retrieval system
