Lagenorhynchus albirostris (white-beaked dolphin): 132521620
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Entry
132521620 CDS
T10760
Symbol
COL4A3
Name
(RefSeq) collagen alpha-3(IV) chain
KO
K06237
collagen type IV alpha
Organism
lalb Lagenorhynchus albirostris (white-beaked dolphin)
Pathway
lalb04151
PI3K-Akt signaling pathway
lalb04382
Cornified envelope formation
lalb04510
Focal adhesion
lalb04512
ECM-receptor interaction
lalb04518
Integrin signaling
lalb04820
Cytoskeleton in muscle cells
lalb04926
Relaxin signaling pathway
lalb04933
AGE-RAGE signaling pathway in diabetic complications
lalb04974
Protein digestion and absorption
lalb05146
Amoebiasis
lalb05165
Human papillomavirus infection
lalb05200
Pathways in cancer
lalb05222
Small cell lung cancer
Brite
KEGG Orthology (KO) [BR:
lalb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
132521620 (COL4A3)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
132521620 (COL4A3)
04518 Integrin signaling
132521620 (COL4A3)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
132521620 (COL4A3)
09142 Cell motility
04820 Cytoskeleton in muscle cells
132521620 (COL4A3)
09150 Organismal Systems
09152 Endocrine system
04926 Relaxin signaling pathway
132521620 (COL4A3)
09154 Digestive system
04974 Protein digestion and absorption
132521620 (COL4A3)
09158 Development and regeneration
04382 Cornified envelope formation
132521620 (COL4A3)
09160 Human Diseases
09161 Cancer: overview
05200 Pathways in cancer
132521620 (COL4A3)
09162 Cancer: specific types
05222 Small cell lung cancer
132521620 (COL4A3)
09172 Infectious disease: viral
05165 Human papillomavirus infection
132521620 (COL4A3)
09174 Infectious disease: parasitic
05146 Amoebiasis
132521620 (COL4A3)
09167 Endocrine and metabolic disease
04933 AGE-RAGE signaling pathway in diabetic complications
132521620 (COL4A3)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04147 Exosome [BR:
lalb04147
]
132521620 (COL4A3)
00536 Glycosaminoglycan binding proteins [BR:
lalb00536
]
132521620 (COL4A3)
Exosome [BR:
lalb04147
]
Exosomal proteins
Exosomal proteins of other cancer cells
132521620 (COL4A3)
Glycosaminoglycan binding proteins [BR:
lalb00536
]
Heparan sulfate / Heparin
Extracellular matrix molecules
132521620 (COL4A3)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
C4
Motif
Other DBs
NCBI-GeneID:
132521620
NCBI-ProteinID:
XP_060007237
LinkDB
All DBs
Position
6:complement(11410036..11544999)
Genome browser
AA seq
1670 aa
AA seq
DB search
MRPGTAPRPPALLLLLQLVLLVAAPTAGKGCVCKDKGQCFCDGTKGEKGEKGFPGPPGPP
GQKGYPGPEGLPGPQGPKGSPGLPGFTGPKGVRGTTGLPGFSGPPGLPGIPGHPGPYGPV
GLPGCNGSKGEQGFPGLRGTPGYPGIPGAVGLKGEKGAPAEGEGVALDGKGDPGLPGAPG
FQGLPGLPGFPGPIGPPGPPGFFGFPGTMGPPGPKGHMGDNVIGQKGERGMKGLTGPPGP
PGTVIVTLTGLVNRTDLKGEKGDQGAMGQSGHPGPSGPPGESYGSEKGAPGEPGPQGKPG
KDGAPGFPGTEGAKGSKGFPGLRGEDGIKGWKGDMGPPGFRGPTEYYDAYQEKGVEGIPG
PPGPKGAPGPQGPSGPPGAPGSPGSSRPGLQGAPGVPGAKGSKGERGPPGKSAVGLPGSP
GCPGSPGPTGLPGPPGPPGGIVLRRGPPGVGGPPGHTGSPGIPGVDGPKGEPGLLCTQCP
CVPGPPGPPGLPGLDGVKGFPGRQGAAGIKGIPGCPGSAGLPGFPGFPGDQGHPGLKGEK
GEASRPERQVGAPGDPGLRGHPGRKGLDGIPGTPGVKGLPGPKGEPALRGEKGDQGLPGD
PGIPGSPGPAGPAGPSDYGPWGEPGPKGTQGLPGAPGPPGEAGPKGEIGVLTPVPGPPGP
PGAPGRAGPQGPPGIPGSTGKCDLGLPGPDGEPGIPGIGFPGPPGPKGDRGFPGTKGSPG
CPGEMGKPGLPGKPGLPGVKGEPGLAMPGEPGAPGLPGERGNSGEKGESGLPGLPGLPGI
PGTGGLDGPRGDPGQPGPPGERGPPGRCKESLSGAQGLPGLNGLKGQQGRRGETGPKGDP
GIPGLDRSGFPGEPGPPGMPGHRGEMGPPGTKGYPGNPGFLGPPGEKGTIGMMGVPGNIG
PPGPPGKPGTLGQRGSFGIPGVKGERGAPGAKGEQGDKGIPGPPGILRLVGDKGEPGLKG
LAGKPGEKGNRGIPGLPGFKGLQGPPGPPGSPDSRGDPGSIGNPGEPGPRGVPGSMGNMG
VPGTKGMKGTMGFPGLAGRPGLPGTHGPQGDKGEPGYSEGTRPGPPGPKGDPGLPGDMGE
KGGRGPPGTPGCSGPAAPEGVPGNPGSPGHPGKPGPDGDLGSKGIKGFPGSPGIKGPPGP
PGFPGNPGPAGERGNQGRDGIPGPAGEKGETGLLGALPGPRGKPGPQGAKGDRGAPGLPG
LPGRKGPVGDAGPRGPIGMTGPQGPPGFPGSIIPGQKGDRGPPGRRGNPGEPGPPGPKGG
PVEGIKGDKGFMGQPGPRGPPGTVGDMGPPGHPGVPGAPGLPGVRGDPGFYGFPGMKGEK
GNSGFLGPSGPPGRIGPKGPPGVRGDPGTVKIISLPGSPGPPGPAGEPGMQGEPGPPGLP
GNPGPCGPRGKPGKDGLPGTPGPIGEKGNKGCKGEQGPPGSDGLPGLKGKPGDTGPPARG
TTMRGFVFTRHSQTTAIPSCPEGTGPLYSGFSLLFVQGNEQAHGQDLGTHGSCLQRFTTM
PFLFCNINDVCNFASRNDYSYWLSTPALMPVDMAPITGRALEPYISRCTVCEGPAIAIAV
HSQTTDIPSCPPGWISLWKGFSFIMFTSAGSEGAGQALASPGSCLEEFRASPFIECHGRG
TCNYYSNSYSFWLASLDPRRMFRKPIPSTVKAGELEKIISRCQVCMKRRH
NT seq
5013 nt
NT seq
+upstream
nt +downstream
nt
atgcgccctgggacggcgccgaggccgccggcgctgctgcttctgcttcagctggtgctc
ctggtggccgcgcccactgccggcaagggctgtgtctgtaaagacaaaggccagtgcttc
tgtgatgggaccaaaggggagaagggggagaaaggctttcccggaccccctggacctccc
ggccagaaaggatacccaggtccagaaggcctgcctggaccacagggacccaagggctct
ccaggacttccaggattcactggtcccaaaggcgtgaggggaacaactggattaccagga
ttttcaggtcctcctggacttccaggcatcccaggccatcctggaccgtatggacctgtc
ggtttgccaggatgcaatggttctaagggtgagcaagggtttccaggacttcgggggaca
ccaggctacccaggcatcccgggtgccgttggtttgaaaggagagaaaggggctcctgct
gaaggagaaggtgtagcccttgatggaaaaggtgaccctgggttgccaggagctccagga
ttccagggtttgccaggccttccaggttttcctggacctattggtccccctggccctcca
ggattctttggctttccaggaaccatgggacctccaggacctaagggtcacatgggcgat
aacgtgataggacaaaaaggagagcggggtatgaaaggattaacaggaccaccgggacca
ccaggaacagttatcgtgacactaaccggcctggttaacagaacggacctcaagggggag
aagggagaccagggagccatgggccagtctggacaccctggaccctcagggccacctgga
gaatcttacggatcagaaaaaggtgctcctggagaaccaggcccgcagggaaagcctgga
aaagatggtgcccccggtttccctggcactgagggagccaaaggcagcaagggtttccct
gggttaaggggcgaagatggcatcaaggggtggaaaggagacatgggccctccaggattt
cgtggtccaacagaatattatgatgcgtaccaggaaaagggagttgaaggaattccaggc
ccaccagggcctaagggagctcctggcccacagggtcccagtggtccccctggagcccct
ggaagtcctgggtcatcaaggcctggcctccaaggagcccctggagtaccaggagcaaaa
ggaagtaaaggcgagcgaggacccccaggaaagagcgcagtggggcttcccgggtcccct
ggctgtcctggttcaccaggccctacagggttgccaggacctccaggaccaccaggtggt
attgttcttcgcagaggtccccctggagttggtggacctccaggccatacagggtctcca
ggaatcccgggagtcgatgggcccaaaggggagccaggccttttgtgcacacagtgtcct
tgtgtcccggggcctccaggccccccaggattgccggggttagatggcgtaaaaggattc
ccaggaagacaaggagcagctggcattaaaggaatcccagggtgcccaggaagtgctggt
cttccaggatttccgggattcccgggtgatcagggtcatccaggacttaaaggagaaaaa
ggtgaagcatctcggccagagagacaagtgggtgccccaggggatccagggctccgagga
catcctggaagaaagggcttggatggaattcctggaactccgggagtaaaaggattacca
ggacctaagggagaaccggccctgaggggggagaagggagaccagggtcttccaggggat
cctggcatccctgggtccccaggacctgcaggaccggctggaccatcagactatggacct
tggggagagcctggtccaaagggcacccaaggacttcctggagcccctggaccacctgga
gaagccggtcctaagggagaaatcggtgttttgacaccagttccagggcccccaggacct
cctggagccccaggccgtgctggcccccaaggtccacctggtatccctggatccacagga
aaatgtgatctgggtcttcctgggcccgatggtgaaccaggaattccaggaatcggattc
cctgggcctcctggacctaagggagaccgaggttttccaggaacaaaaggatcaccaggc
tgtcctggagaaatgggaaagccagggttacctggaaagccaggcctcccaggagtcaag
ggagaaccagggctagccatgcctggagagccaggagcaccaggtttgccaggagaaaga
ggcaactctggggaaaagggagaaagtggactccctggacttccaggtctccctggaatt
ccaggaactggagggcttgatggaccacgaggggatccagggcagcctggaccacctgga
gaaagaggccccccaggaaggtgcaaagaaagtctcagtggagctcaaggacttccaggc
ttaaatggattgaaagggcaacaaggcagaagaggcgaaacggggccaaagggagaccca
ggtattccaggcttggataggtcaggatttcctggagaacctggaccaccaggaatgccg
ggtcatcgaggggagatgggaccacctggtacaaaaggatatccaggaaatccaggattt
ttagggccaccaggtgaaaaaggaacgattgggatgatgggggttcccggaaacattggc
cctccggggcctcctgggaagccaggcaccctgggacagagggggagctttggaattcca
ggagtaaaaggcgagagaggagccccaggtgccaaaggggaacaaggagataaaggaatt
ccagggcctcctggaatattacgcttagtcggggacaaaggggaaccaggactcaaagga
cttgcagggaagcctggtgagaaaggaaacagaggcattccaggattaccaggtttcaaa
ggactccaagggccacctggaccaccaggatcaccagactccagaggagatccaggcagc
attgggaatcctggtgagccaggaccacgtggtgtgccaggaagcatgggaaacatgggg
gtgccaggtactaaaggaatgaagggaactatgggattcccaggtctagctggaagacca
ggcctcccaggtactcatggtccccaaggagataagggagagccaggttattcagaaggt
acaaggccaggaccaccaggaccaaagggagatccaggattgccaggtgacatgggagag
aaaggaggtagagggccacctggcacacctggatgttcgggccctgctgcaccagaggga
gttcctgggaatcccggaagccctggccacccaggaaagcccggtcctgatggtgatttg
gggtctaaaggaatcaaaggtttccctggctctccaggaataaaaggccctccaggtcct
ccaggattcccaggaaatcctggaccagcgggtgagagaggtaatcaaggacgtgatgga
attcctggtccagctggagaaaaaggagaaacaggtttgctgggagcacttccaggccca
agagggaaacctggtcctcaaggagccaaaggagacaggggagccccaggcttgccgggc
ctccctggcaggaaagggccagtgggagatgctgggcctcgagggcccattggcatgaca
ggacctcaagggccaccaggctttcctggttcaatcatccctggccaaaaaggagatcga
ggtccacctggcagaagaggaaacccaggtgagcctggtccccctggacctaaagggggt
cccgtagaaggcataaaaggagacaagggatttatgggccaacctggcccaagaggtccg
cctggaactgtaggagacatggggccaccaggtcatccgggagtaccaggtgccccaggt
ctgccaggggtcagaggtgatcctggattctatggatttccgggcatgaaaggggagaag
ggtaattcaggatttctgggaccaagtggacctccagggcgaattgggccaaaaggacca
cctggtgtacgtggagaccctggcacagtgaagatcatctcccttccaggaagcccaggc
ccacctggcccagctggagaaccagggatgcaaggagaacctgggcccccggggctaccg
ggaaacccaggaccctgtgggccaagaggtaaaccaggcaaggatggactaccaggaacc
cctggaccaattggagaaaaaggcaacaaaggttgtaaaggagagcaaggaccgcctgga
tccgatggcctgccgggcttgaaggggaaacctggagacactggaccacctgcaaggggg
acaacgatgaggggctttgtcttcacccggcacagccagaccacggcgattccctcctgt
ccagaagggacaggaccactctatagtgggttttctcttctctttgtacaaggaaatgaa
caagcccatggacaggacctgggaactcatggcagctgcctgcagagatttactacgatg
ccattcttattctgcaatatcaatgatgtatgtaatttcgcatctcgaaacgattattca
tactggctgtcaacaccagctctgatgccagtggacatggctccaattactggccgggcc
ctggagccttacattagcagatgcactgtctgtgaaggtcctgcgattgccatagctgtt
cacagccaaactactgatatcccctcatgtcctcctggctggatttctctctggaaagga
ttttctttcatcatgttcacaagtgcaggttcagagggcgctgggcaggcactggcatcc
cctggatcctgcttagaagaattccgagccagtccatttatagaatgtcatggaagagga
acatgcaactactattcaaattcctacagtttctggttggcttcattagaccccagaaga
atgttcagaaaacctattccgtcaactgtgaaagctggggagttagaaaagataataagt
cgctgtcaggtgtgcatgaagaggagacattga
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