Lagenorhynchus albirostris (white-beaked dolphin): 132530627
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Entry
132530627 CDS
T10760
Symbol
COL9A1
Name
(RefSeq) collagen alpha-1(IX) chain isoform X1
KO
K08131
collagen type IX alpha
Organism
lalb Lagenorhynchus albirostris (white-beaked dolphin)
Pathway
lalb04151
PI3K-Akt signaling pathway
lalb04510
Focal adhesion
lalb04512
ECM-receptor interaction
lalb04820
Cytoskeleton in muscle cells
lalb04974
Protein digestion and absorption
lalb05165
Human papillomavirus infection
Brite
KEGG Orthology (KO) [BR:
lalb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04151 PI3K-Akt signaling pathway
132530627 (COL9A1)
09133 Signaling molecules and interaction
04512 ECM-receptor interaction
132530627 (COL9A1)
09140 Cellular Processes
09144 Cellular community - eukaryotes
04510 Focal adhesion
132530627 (COL9A1)
09142 Cell motility
04820 Cytoskeleton in muscle cells
132530627 (COL9A1)
09150 Organismal Systems
09154 Digestive system
04974 Protein digestion and absorption
132530627 (COL9A1)
09160 Human Diseases
09172 Infectious disease: viral
05165 Human papillomavirus infection
132530627 (COL9A1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
00535 Proteoglycans [BR:
lalb00535
]
132530627 (COL9A1)
Proteoglycans [BR:
lalb00535
]
Extracellular matrix (ECM) proteoglycans
Others
132530627 (COL9A1)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Collagen
Laminin_G_2
DUF4882
Toxin_R_bind_N
Laminin_G_1
Laminin_G_3
Motif
Other DBs
NCBI-GeneID:
132530627
NCBI-ProteinID:
XP_060023873
LinkDB
All DBs
Position
12:81372299..81456065
Genome browser
AA seq
925 aa
AA seq
DB search
MKNFWKIPFLFFVCSFVGPWASATVKRRPRFPVNSNANGENELCPKVRIGQDDLPGFDLI
SQFQIDKAASRKAIQRVVGSTALQVAYKLGKKVDFRIPTRQLYPSGLPEEYSFLTTFRMT
GSTLEKNWSIWQIQDSSGKEQVGVKINGETKSVAFSYKGLDRSLQTVTFSNLPSLFDSQW
HKIMIGVERSSATLFVDCNRIESLPIKPRGQIDVDGFAVLGKLVDNPQVSVPFELQWMLI
HCDPLRPRRETCQELPTRVTPSETTDLRGPPGEQGPPGPPGPPGVPGIDGIDGDRGPKGP
PGPPGPPGEPGKPGAPGKPGTPGADGLTGPNGSPGSVGPRGQKGEPGVPGPRGFPGRGIP
GPPGPPGGAGLPGELGRVGPIGDPGRRGPPGPPGPPGPSGTIGFHDGDPLCPSSCPPGRS
GYPGLPGMRGHKGAKGEIGEPGRQGHKGEEGDQGGIGQVGAQGPPGAQGLRGIAGITGAK
GEKGARGLDGEPGPQGLPGAPGDQGRRGPLGETGPKGDRGAQGSRGIPGLPGPKGDTGLP
GVDGRDGIPGMPGTKGELGKPGPPGEAGLQGLPGIPGIPGAKGVAGEKGNTGAPGKPGQL
GNSGKPGRQGPPGEVGPRGPRGLPGSRGEEGPVGPPGLPGKLGSLGRPGFPGLPGPPGLP
GMKGDRGVVGEPGPKGEQGASGEEGELGGRGELGDIGLPGPKGSAGSPGEPGLRGPEGSR
GLPGVEGPQGPPGPRGVQGEQGATGLPGIQGPPGRAPTDQHIKQVCMRVIREHFAEMAAS
LKRPDFGASGLPGRPGPPGPPGPPGENGFPGQMGLRGLPGMKGPPGALGLRGAKGDMGER
GDRGPPGRGPKGLPGTSGLPGDPGPASYGRNGRDGERGPPGVAGIPGVPGPPGPPGPAGF
CEPASCTLQAGQRAFNSKGPDPSKA
NT seq
2778 nt
NT seq
+upstream
nt +downstream
nt
atgaagaacttctggaaaatcccatttctcttctttgtatgcagctttgtgggaccttgg
gcatccgcaactgtcaagcgccgcccaaggttccctgttaattcaaatgctaatggtgaa
aatgaactctgtccaaaggtcaggattggacaagatgatttaccagggtttgacctgatt
tctcagttccagatagataaagccgcatctagaaaagctatccagagggtagtggggtca
actgctttacaagtggcttacaaactgggaaagaaggtagacttcaggattccaaccagg
caattatatcccagtgggctgcctgaagaatactcctttctaaccacttttcggatgact
ggaagcacacttgaaaagaactggagcatttggcagattcaagattcctcagggaaggag
caagttggcgtgaagattaatggcgaaacaaaatctgttgcattttcatacaagggactg
gacagaagtctccaaactgtgaccttttcgaatttgccctccttgtttgattcccagtgg
cataagatcatgattggcgtggaaaggagcagtgcaactctttttgttgactgcaacagg
atcgagtccttacctataaagccaagaggccagatcgatgtcgatggctttgctgtgctg
ggaaaacttgtggataatcctcaagtttctgttccgtttgaactccagtggatgctgatt
cattgtgacccactgcgacccaggagagaaacttgccaggagctgccaacgagggtaaca
cccagcgagaccaccgacctgaggggacccccgggtgagcagggtcctccggggccgccg
ggcccccctggagtcccgggcatcgacggcatcgacggtgaccgaggtccgaagggtccc
ccgggccccccgggccccccgggagagccgggaaagccgggagctccgggcaaacctggc
acgccgggcgcagacggattaacgggacctaatggatctcctggctctgttggaccgaga
ggacagaaaggagaacctggcgtgccgggacctcgtggatttccaggccgtggtattcct
ggacctcctggtcctcctgggggagcaggcctccccggagagcttggccgtgttggacca
attggtgaccctgggagaagaggaccaccgggcccccctggtcccccgggacccagcgga
acaattggctttcatgacggagatccattgtgtcccagttcctgtccaccgggccgctct
ggatatccaggcctgccgggcatgaggggtcataaaggggctaaaggagagattggtgaa
cctggaagacaaggtcacaagggtgaagaaggagaccagggcggaattggacaggttgga
gctcaaggacctccgggagctcaaggtttgagaggcatcgctggcataactggggccaaa
ggggaaaaaggcgctcggggcttagatggagaacccggaccacaaggtctccctggtgca
cctggtgatcaagggcggcgaggacctctaggagaaacaggtcccaagggagacagaggg
gctcaaggttctcgaggaattcctggtctccctgggcccaagggcgacacgggcttgcca
ggtgtggacggccgggacgggatacctggaatgccgggaacaaagggtgaactagggaaa
cctggacctcctggggaagcagggttgcaggggttacctggtatacctggaattcctggc
gcaaagggtgttgccggtgaaaagggtaacacaggtgctccagggaagcccggtcaactg
gggaattcaggcaaaccgggccgccaggggccaccaggagaggtgggaccccgaggacct
cggggcctccctggcagtagaggtgaagaaggaccagtaggaccccctggactaccaggt
aaactgggttctctcggcagacctggcttccccggcttgcctggcccccctggacttcct
ggaatgaaaggtgacaggggcgtagttggtgaacctggtccaaagggtgaacagggtgcc
tctggtgaagagggagaactgggaggaaggggtgaactgggagatataggattacctggc
ccaaagggatctgcaggtagccccggggagcccggcttgaggggacccgaaggaagccgg
gggcttcctggggtggaaggaccacaaggaccccctggcccgcgaggcgtgcagggagaa
cagggcgccaccggcctgcctgggatccagggccctcccggcagagcacccaccgatcag
cacattaagcaggtttgcatgagagtcattcgagagcattttgctgagatggctgcaagt
ctcaagcgtccggacttcggagcctcgggcctccccgggcggcctggcccccctggtccc
ccaggcccccctggagagaacggtttcccaggccagatgggacttcgaggcctcccgggc
atgaagggcccccccggggctcttggtttgaggggagcgaaaggtgacatgggggaaaga
ggtgatcgtggacccccaggaagaggtcccaaaggtttgcccgggacttcaggtctccca
ggtgacccaggtcctgccagctacgggaggaatggccgggatggtgagcgaggcccccca
ggggtggcaggcatccctggtgtacccggccccccgggacctcctggccctgctggtttc
tgcgagccagcctcctgcaccttacaggctgggcagcgggcatttaatagcaaaggtcca
gatccatcaaaggcttag
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