Lacinutrix sp. 5H-3-7-4: Lacal_1429
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Entry
Lacal_1429 CDS
T01533
Name
(GenBank) DNA mismatch repair protein mutS
KO
K03555
DNA mismatch repair protein MutS
Organism
lan
Lacinutrix sp. 5H-3-7-4
Pathway
lan03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lan00001
]
09120 Genetic Information Processing
09124 Replication and repair
03430 Mismatch repair
Lacal_1429
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lan03400
]
Lacal_1429
DNA repair and recombination proteins [BR:
lan03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
Mismatch and loop recognition factors
Lacal_1429
BRITE hierarchy
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Ortholog
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Gene cluster
GFIT
Motif
Pfam:
MutS_V
MutS_III
MutS_I
MutS_IV
MutS_II
ATPase_2
AAA_29
Motif
Other DBs
NCBI-ProteinID:
AEH01277
UniProt:
F6GJD1
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Position
1631537..1634158
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AA seq
873 aa
AA seq
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MAKKTKKVTPLMKQYNAIKAKYPDALLLFRVGDFYETFGSDAVKAAGILGIILTKRGAGS
ETETELAGFPHHSLNTYLPKLVKAGERVAICDQLEDPKQTKTIVKRGVTELVTPGVALND
EVLQSKTNNFLCSVYFGKNTIGIAFLDISTGEFLTSQGNQEYIDKLLQNFSPSEILVSKQ
KRLQFAENFGEDFHTFNLEDWVYQSDYSNETLLKHFNTKSLKGFGVENLTEGIIASGSIL
HYLSETQHNKLEHITSVSRIAEDEYVWMDRFTIRNLELYNSTNNNAVTLLNVIDKTISPM
GGRLLKRWLALPLKNVERIKQRHEVVSFLKAEKTIHQKIQNHIKSIGDVERLISKVATGK
VSPREVIQLKNSLESIIPIKALSSNCDNESLKIIGDTLQGCDILRDKIKQTLDEEAPVNI
LKGKTIATGFSNELDELRELSASGKSYLDNMLKRESERTGITSLKIASNNVFGYYIEVRN
THKDKVPEEWIRKQTLVNAERYITEELKEYEAKILGAEERITTIEQKLFAELVLWMNQYI
KPVQQNAFLIAKLDCLCGFSQLANENNYVYPEIDNSYDLEIIEGRHPVIEKQLPIGEQYI
ANNVFLDRDTQQIIMITGPNMSGKSAILRQTALIVLLAQIGSFVPAEKARIGLVDKIFTR
VGASDNISMGESTFMVEMNETASILNNMSDRSLVLLDEIGRGTSTYDGISIAWAISEYLH
EHPAKAKTLFATHYHELNEMTETFPRIKNFNVSVKELKDNVLFLRKLVEGGSEHSFGIHV
AKLAGMPQQVLRRANKILKKLEQSHSSEELTDKVKSIKDEMQLSFFNLDDPLLEQIKEEI
LLTDINTLTPVEALMKLNEIKRMLVKTSEVKNN
NT seq
2622 nt
NT seq
+upstream
nt +downstream
nt
ttggcaaaaaagactaaaaaagtaacgcctttaatgaagcagtataatgcgataaaggct
aaatatccagatgctttattgttatttcgagtgggtgatttttacgaaacctttggtagc
gatgctgtaaaagcagctggaattttgggtattatactaaccaagcgtggtgcaggaagc
gaaacagaaactgagcttgcaggttttcctcatcattctctaaatacgtatttaccaaaa
cttgtaaaagcaggagaacgtgttgccatatgcgatcagttagaagatcctaaacaaaca
aaaacaattgtaaaacgtggtgttacagagttggttacgcctggagtggcattgaacgat
gaggttttacaatctaaaacaaataactttttatgttctgtttattttggaaaaaatacc
ataggtatagcatttttagatatatctacaggagagtttttaacatctcaaggaaaccaa
gaatatattgataagttgttacaaaactttagtccaagtgaaatattagtatctaaacaa
aaacgacttcagtttgcagaaaattttggtgaagattttcacacctttaatttagaagat
tgggtttaccagtcagactattcaaacgaaacacttttaaagcattttaacaccaaatct
ttaaaaggttttggagttgaaaaccttactgaaggtattatcgcttcgggttcaatttta
cattatttatcagaaacacaacataataaattagagcatattacatctgtgtctagaata
gctgaagatgaatatgtttggatggaccgctttacaattagaaatttagagttgtataac
tcaacaaataataatgcagtaacattattaaacgttattgataaaacaatttcgcctatg
ggcggaagacttttaaaacgttggttagctttaccattaaaaaatgtagaaagaataaaa
caacgtcacgaggttgtttcatttttaaaagcagaaaaaacgatacatcaaaaaattcaa
aatcatataaaaagtataggagatgtagaacgcttaatatctaaggttgctacaggaaaa
gtaagtccaagagaagtaattcagcttaaaaattctttagagtctattatacctataaaa
gcattatcatctaattgcgataatgaatctttaaaaattattggagatactttacaaggc
tgtgatatattaagagataaaataaaacaaacgttagacgaagaagctccagtaaatata
ttaaaaggaaaaacaattgcaacaggcttttctaatgagctagatgaacttagagaactt
tctgcttccggtaaaagttatttagataatatgctaaaacgagaaagtgaacgtacaggt
attacttcacttaaaatagcatctaataatgtgtttggttattatatagaggttagaaat
acgcataaagataaagtgccagaagagtggattagaaaacaaacacttgttaatgcagag
cgttatataaccgaagagttgaaagaatacgaagccaaaatcttaggagcagaagagcgt
ataactactatcgaacaaaaattatttgcagaacttgtgttatggatgaatcaatacata
aaacctgtacagcaaaatgcttttttaatagcaaaattagactgtttgtgtggtttctct
caattagctaatgagaataattatgtatatccagaaatagacaactcttacgatttagag
ataatagaaggaaggcatcctgtaatagaaaaacaattaccaataggagaacagtacatt
gctaataacgtttttttagatcgagatacacaacaaataataatgattaccggaccaaac
atgtctggtaaatctgcaatactacgtcaaacagcattaattgtattattagcgcaaata
ggaagttttgtgccagcagaaaaagcaagaataggtttggtagataaaatatttacaaga
gtaggagcaagtgataatatatcaatgggagaatctacttttatggtagagatgaatgaa
acagcctctatcttaaataatatgtccgatagaagcctagtcttactagatgaaatagga
agaggaacaagtacgtatgatggtatatctatagcttgggcaattagtgaataccttcat
gagcacccagcaaaagcaaaaacgctttttgcaacgcattatcatgagttaaatgaaatg
accgaaacttttccaagaataaaaaactttaatgtatctgtcaaagagttaaaagacaat
gtactttttttaagaaaactagttgaaggaggaagtgaacatagttttggtatacatgtt
gctaaattagcgggaatgccacaacaagttttgcgtagagctaataaaattttgaaaaaa
ttagagcaatcacattccagcgaagaactaacagataaggtgaaatctattaaagatgaa
atgcaattaagcttttttaacctagacgatccgttgttagaacaaattaaagaagaaatt
ttattaacagatattaatacgttaacaccagttgaagcattaatgaagctaaacgaaata
aaacgtatgttagtgaagaccagcgaggtaaaaaataattaa
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