Lupinus angustifolius (narrow-leaved blue lupine): 109332602
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Entry
109332602 CDS
T04664
Name
(RefSeq) tetratricopeptide repeat protein SKI3
KO
K12600
superkiller protein 3
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109332602
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lang03019
]
109332602
Messenger RNA biogenesis [BR:
lang03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Ski complex
109332602
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
TPR_1
TPR_2
TPR_16
TPR_11
TPR_8
TPR_14
TPR_17
TPR_19
TPR_12
TPR_9
TPR_6
TPR_7
ARM_TT21_C
BTAD
TPR_15
DUF6584
Motif
Other DBs
NCBI-GeneID:
109332602
NCBI-ProteinID:
XP_019423132
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All DBs
Position
LG18:complement(16567925..16575825)
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AA seq
1180 aa
AA seq
DB search
MAMDEKEEEERAAELLFRRLQDSPDDASLHFDIGILLWEKQDNKEKAAQHFIISAKLNPN
NGQVFKYLGHYYSSIISSDTQRAIKCYQRAVALNPLDSNAGEALCNLLDQGGKDSLEVAV
CYEASQNSPRAFWAFRRLGLLQLHQNKWPEAVQSLQYAIRGYPTSPHLWEALGLAYHRLG
RFTAALKSYARAIELDNTMLFAFIQSGNISLTLASFRKGVEHFRQALEISPQSVPAQYGL
ALALLGLAKDCINLGAYQWGASLLEEASEVARASAFFVRNVSCIWKLHADIQLTYARCFP
WVEDVQKLETDKEAFSASIISWRMTCLLAARRAMFSYQRALHLSPWQANIYADIAVTSDL
ITSLSENCKQDSSAWPLPEKMSLGALLLEGDNYEFWMALGCLSHHNALNHHALIRGLQLN
LSLAVAWGYLGKLYYKEGEKQLAKQVFDRARSIDPGLALPWASMSAESCIRDLELDEAFE
SCSRAVQIMPLAEFQIGLTKLALPSGRLSSSQVFGAIQQAVQHSPHYPESHNLHGLVCEA
RKEYKSAAASYRLARHAINIGSWTIADSQIKDISINLARSLSLAGNAVDAVQECENLKIQ
GALDAEGLQVYAFSLWQLGENGLALSVARSLAATLSSMEKASVATSICFICRLIYYICGL
DAVITNILKMPKELFQSSKVCFVMLAINALDGNNRLGFVVTTTRYFLKYHEEIARMHFLI
ALGKLVKNGSVCCVEVQSGVAYLKKAMHMFPNCNLMRNLLGYLLLSSKELNNCHVAIRCC
KLGHLDLSDQEGLKSASDIHGAAAVACYATSNSSPKFTFPTCTKQCSSHSGAIRYLQKYS
PPRPWNHDAQYLIVLSYLQRAREERFPHHLCVILKRLTHVALANELYSKTEMLYQYRHFQ
LLLCASEISLQCGDHITSISHAKKASELVLPDDYLFFAHLLLCRVYAMKGDHLNFKNEFV
QCLELRTDCHIGWICLKLMECRYELQMSSNVIDLNFEECVQKGGNSLNMWMAVYNLVRGM
ISLQNRDLFSAEEFMGQACSLTGFESCLFLCHGAICMEIGRQHNDSKFLLQAAKSLTKVH
ELSLIPLPLVSVLVAQAEGSLGSKEKWDRNLSLEWDTWPSEMRPAELYFQMHLLARQLKA
GAKTTYSIVSTQTPQRWVLRAIHVNPSCMRYWKVLLKLLE
NT seq
3543 nt
NT seq
+upstream
nt +downstream
nt
atggctatggatgaaaaggaggaggaggaaagagcagcagagcttctcttcagacgcttg
caggattccccggacgacgcttcccttcattttgatattggcatattgttatgggaaaaa
caagacaataaggaaaaggctgctcaacattttatcatatctgccaaattgaaccctaat
aatggacaagttttcaaatatctgggccattattatagcagcattattagcagtgacact
cagcgagccattaagtgttaccaacgagctgttgcgctcaatcctcttgattctaatgct
ggggaagctctttgcaatttacttgaccaaggaggaaaggatagtttggaggtggcagtg
tgctacgaagcttctcaaaactcacccagggctttctgggctttccgtagattaggtttg
ctgcagcttcatcaaaacaaatggcctgaagctgttcaaagccttcaatatgccattcga
ggctatcccacttctcctcatttgtgggaagctttgggccttgcttatcaccgactcggc
aggtttactgctgctctaaagtcttatgcccgagccattgaattggataataccatgctc
tttgctttcattcaaagtggaaatatctccttaactcttgcttcatttagaaagggtgtt
gaacattttcgacaagctctggagatttcaccgcaatctgtgcctgcacaatatggactt
gctttggcactgcttggtttggcaaaagattgcattaacctgggagcatatcagtggggg
gcttcattgttagaggaagcatctgaggttgctagggcaagtgctttttttgttaggaat
gtctcatgtatttggaaactgcatgctgatatccagcttacatatgcaagatgttttcct
tgggttgaggatgtccaaaaattggaaaccgataaggaggctttcagtgcttccattatt
tcttggaggatgacctgcttgttggctgcaagacgtgctatgttttcgtatcaacgagcc
ctgcacttgtcaccatggcaagcaaacatctatgctgacattgcagtaacttcagatctt
attacttcattgagtgagaattgtaaacaagactcaagtgcatggccactgccagagaag
atgtctctgggagccttgctacttgagggtgacaattatgagttttggatggctctggga
tgtttgtcgcaccataatgcacttaatcatcatgctttaatcaggggactgcaattgaat
ctatctctagctgttgcttggggatatcttgggaagctgtattataaagagggtgaaaag
caactggcaaagcaggtgttcgatcgtgctagaagtattgatcctggccttgcattgcca
tgggcaagcatgtcagctgagtcttgtattagggaccttgaactagatgaagcatttgag
agctgttcacgagctgtgcagataatgcctttagctgaattccaaattggtctcactaag
cttgctttgccaagtggccgcctgtcatcttcacaggtttttggagctattcaacaggct
gtgcagcattctcctcactatcctgaatcccataatttacatgggctggtttgtgaggct
cgaaaagagtacaagtctgctgctgcttcttataggttagcacgtcatgcaatcaacatt
ggctcatggactattgcagactcacaaatcaaggacatatcaatcaatttggccagatcg
ctttctttggcagggaatgctgttgatgctgtgcaggaatgtgaaaatttgaagatccaa
ggggcacttgacgcagaaggcttacaggtatatgctttctcattgtggcaacttggtgaa
aatggtttggctctctctgtagctagaagtcttgctgcaactctttcttctatggaaaag
gcatctgttgctacatccatatgcttcatctgtagattaatatactacatatgtggactg
gatgcagtcatcactaacattttgaaaatgccaaaggagctatttcaaagttcaaaagtt
tgttttgttatgttggctatcaatgctcttgatggaaataatcgtcttggatttgttgtc
acaactacccgatattttctcaagtatcatgaagaaattgccaggatgcactttttaata
gcgcttggtaaactggtcaaaaatgggtctgtttgctgtgttgaagttcagagtggagtt
gcctacctcaaaaaagctatgcacatgttccctaactgtaatttgatgaggaaccttctt
ggctatctcttgctatccagtaaagagttaaacaattgtcatgtggcgataagatgctgt
aaactggggcatcttgatctttctgatcaagaaggtttaaaatcagcttctgatattcat
ggtgctgcggcagttgcttgctatgccactagcaacagcagtccgaagtttacttttcca
acttgtacgaagcagtgttctagtcattctggagctatcagatacctgcagaagtactcc
ccccccagaccatggaatcatgatgcccagtacttgattgttcttagttatcttcagagg
gcacgtgaagagagatttcctcatcatctttgtgttatactaaagcgtctaactcatgtt
gccctcgcaaatgaattgtatagcaagacagaaatgttgtatcaatatagacacttccaa
cttctactttgtgcctctgagatcagtttacaatgtggggatcacattacctctatctct
catgcgaaaaaggcttctgaacttgtgcttcctgatgattatttattcttcgctcatcta
ctactgtgccgtgtgtatgccatgaaaggtgatcatctaaattttaagaatgagtttgta
caatgcttggagcttaggacagattgccatattggttggatctgtctcaaactaatggaa
tgtcggtatgaactgcaaatgagctccaatgtcatagatctgaactttgaagaatgtgtt
caaaagggtggaaattcattgaatatgtggatggctgtatataacctagtgagaggtatg
atttccttgcagaacagggatttattctccgcagaagagtttatgggacaggcttgttcc
ttgacaggttttgagagctgcctctttctatgtcatggtgctatttgtatggagattggc
aggcaacacaatgattctaagttcctattacaggctgctaagagtcttaccaaagttcat
gagctttcattaattcccttgcctcttgtctctgtattggtggctcaagcagaaggaagc
ctcggttctaaggagaagtgggacagaaatctttcccttgaatgggatacttggccatca
gaaatgaggcctgctgagctttactttcaaatgcatttgcttgcaagacagttgaaagct
ggggccaaaactacatatagcatagtgtccactcagactcctcagagatgggttcttagg
gcaattcatgtgaatccttcttgtatgagatattggaaagttttactgaagcttctagag
tag
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integrated database retrieval system
