Lupinus angustifolius (narrow-leaved blue lupine): 109340616
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Entry
109340616 CDS
T04664
Name
(RefSeq) CCR4-NOT transcription complex subunit 1-like
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109340616
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lang03019
]
109340616
Messenger RNA biogenesis [BR:
lang03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109340616
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
109340616
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
CNOT1_TTP_bind
ARM_Cnot1
DUF3819
CNOT1_HEAT
NOT1_connector
Motif
Other DBs
NCBI-GeneID:
109340616
NCBI-ProteinID:
XP_019433885
LinkDB
All DBs
Position
Un
Genome browser
AA seq
2341 aa
AA seq
DB search
MISFSNTASKQIRFLLNSLNQVNFHSVFHQLIQFAEFGTVGSILLLQTCLDHFNIARRDM
KDMQPEQILGDVVKYLLEKPNFNAVFSESMKNVEINESFLESFCNGLKLSLMEKIAVSLS
LSDSENPDARHCGKNFCTAQIEEVFANPGSLNCHDLIHDIIIFLKQSEGLSKYMDSFMQI
LSLVQFKDTLSFVLNPLLPDEMREAEFLRNMELFHESGENDFDAILADIQKEMNMGEIVN
ELGYGCTVDVSQCKEIFSLFTPLTDNTLSKLLGSIACTHAGLEDNQSTFLTFGAALGYNL
SELPPPNSWNIDVLIDTIKQLAPQTNWVQVFENRDHEGFFLPNEEAFSFLMSVYKHACKE
PFPLHAICGSVWKNTEGQLSFLKFAVSAPPEVFTFAHSARQLTFIDAVNGSKFQNGHSNH
AWLCLDLLDVLCQLAERGHASSVRSVFEYPLRQCPEILLLGMAHINTAYSFFQHEVCHIV
FPMIVKRAGDSEMIQHLWHVNPNLVLRGVMDSQKNNIDIVTRIVDICQELKILSSVVEII
PSYYGIRLAAVSGTKEYIDLEKWLNNNLTTHKDVFFKECLKFLKDVHLTGSLDLSGKSFH
QSGAVLNLYAESTATFLKVLKSHADLVTSRQLSEDLERLHIFIDSNPRLQNSGTNDSSAS
DGYADDIEAEANSYFHQMFSDSLSMNEMVEMLARLKESSVKREKSIFECMIANLFEEYRF
FQKYPERQLKIAALLFGSVIKHQLVTHLSLGIALRYVLDALRKPADSKMFMFGSLALEQF
VDRLPEWPQYCNHILQISHLRSTHLEIVGFIEDALARISSAHADGDGASLASGISSHNSA
PATLGHVELNASSITQPGQQHMPLQLQQRRDIPLDHRYKASFGLGSSTDVKPLLSSLGQS
SVVTPPDASNINKLHSTVSASSMLASGFVRPSRGATSARFGSALNIETLVAAAEKRETPI
EAPGSEVQDKISFIINNISVANADTKAKEVTEILKEQYYPWFAQYMVMKRASIEPNFHDL
YLTFLEKVNSKALNKEIVKTTYENCKVLLGSELIKSSSEERSLLKNLGSWLGKLTIGRNQ
VLRAREIDPKSLIIEAYEKGLMIAVIPFTSKILEPCQSSLAYQPPNPWTMGILGLLAEIY
SMPNLKMNLKFDIEVLFKNLSVDLKDVTPTSLLKDRKRAIEGNPDFSNKDVGSSQAQMIS
DVKSGLVPPVNQVDSPLEVTNLSNTGGHPHMLSQYAGPLHISTGTLMEEEKVTPMGLSDQ
LPSAHGLLQATPTPAPFSISQKNCFSYMMFFCLNLCDILTLFIYYRAVPIAMDRAIKEIV
SSIVQRSVSIATQTTKELVLKDYSMESDENRILNAAHLMVASLAGSLAHVTCKEPLRASI
SSQLRTSLQNLSIGSEILEQAVQLVTNDNLDLGCAVIEQAATDKAINTIDTDIGQQLSLR
RKHREGMGSTFFDANLYTQGSMGGVPDYLRPKPGQLSLSQQRVYEDFVRLPWQNQSSQTS
NSVSSVQSGNAGSVITGYEGVSRQLDDMAESNLSSQLSASSIHNRAADSSSQLSVEKDSV
ASFPSTASTPELHQVDSSDAVQESGASSQQLVSPGAVERFGSSFLESSLTTRDALDKYQI
VAQKLEALVNNDSAEAEIQGVISEVPEIILKCVSRDEAALAVAQKVFKLLYDNASNSIHV
SAHFGILTAIRDVCKLAMKELTNWVIYSEEERKFNKNITVGLIRSELLNLTEYNVYMAKL
IEGGRNKAATEFSISLLQTLVIEEPKVIPELHNLVDALAKLATKPGSPETLPQLVEMVKK
PAXXXXXNSSFHLSPLQKQDPGLLVANREELITVESVEPDPAGFREQVSMVFAEWYRICE
LPGANDTASAHFISQLHQNILLKGDDVTDRFFRLLMELSVAHCLSTEVINSGAMQSPQQL
QPMSFLAIDVYAKLVFSILKGSSKLILLSKILAVTVRFILEDVEEKKMSFNPRPYFRLFI
NWLLDLGSLEPVIDGANLQILTAFANAFHALQPLKVPGFSFAWLELISHRSFMPKMLTGN
AQKGWPYIQRLLVDLFQFMEPFLRHAELGDSVRLLYKGTLRVLLVLLHDFPEFLCDYHFT
FCDVIPPSCIQMRNIILSAFPRSMRLPDPSTPNLKIDLLQEITQSPRVLSEVDAVLKAKL
MKADVDEYLKSRQQNSSFLSDLKEKLLLSSIEAGSVGTRYNVPLINSLVLYVGMQAIQQL
QGRTPHAQSSANAFPLAVFSVGAALDIFQTLIMDLDTEGRYLFLNAVANQLRYPNTHTHY
FSFILLYLFAESNQEIIQEQITRVLLERLIVNRPHPWGLLITFIELIKNPRYNLWNRSFI
R
NT seq
7023 nt
NT seq
+upstream
nt +downstream
nt
atgatttcattttccaacacagcttccaagcagattcggtttctgctcaattccttgaac
caagtcaactttcactccgttttccatcaactcattcagtttgctgaattcggaaccgtt
gggagcattttgctgcttcaaacatgcttggatcactttaatattgccagaagagatatg
aaagacatgcagcccgagcagattcttggcgatgttgtcaagtacctcttggagaaacct
aacttcaatgcagtgttttctgagtccatgaagaatgtggaaatcaacgaaagcttttta
gaaagtttttgtaatggattgaagttgtctttaatggaaaaaattgcagttagcctttct
ttatctgattctgaaaatcccgatgccaggcattgcggcaagaatttttgcacggctcag
attgaggaagtgtttgccaatcctggctctttgaattgccatgatttaattcacgatatt
atcatcttcctcaagcagtctgagggcctttccaagtatatggattcctttatgcagatc
ttatcgctggttcagttcaaggacacactgtcctttgttttgaatccattgctacctgat
gagatgcgcgaggctgagtttttaaggaatatggagctgttccatgagagtggagagaat
gattttgatgctattttggctgatatccagaaggaaatgaacatgggagagatcgtgaat
gaattaggctatggatgtacagttgatgtctcacagtgcaaggaaatcttttcgctcttc
acacctttaactgataacaccctctctaaattacttggttctattgcttgtacccatgct
gggctggaggacaaccagagcacattcctaactttcggcgcagcccttggctacaatttg
tctgagttgccaccaccgaactcttggaatatcgatgttttgatagatacaatcaagcag
cttgcacctcagaccaattgggtacaggtttttgaaaatcgtgatcatgaaggatttttc
cttcctaatgaagaagcattctcttttctcatgtctgtatataagcatgcctgcaaggag
ccgtttcctctccatgccatctgcgggtctgtatggaagaatactgagggtcaactatct
ttcctcaaatttgctgtatcagcaccaccagaagtgtttacctttgcccactctgcaaga
caattgacatttatcgatgcggttaatggttctaagtttcagaatggacattccaaccat
gcatggctctgtcttgaccttttggatgtcctttgccagctagctgagaggggtcatgcc
agttctgtccgatcggtctttgagtatcccctgagacaatgccctgaaatcttgcttctt
gggatggcacatatcaatactgcttacagcttcttccagcatgaagtatgtcacattgtt
tttcccatgatagtaaaaagggccggagacagtgaaatgattcaacacctttggcatgtt
aatcctaatctggttttgcgaggggttatggattctcaaaagaacaacatagacattgtt
acaagaattgtggacatctgccaggagctaaagattctatcatctgtggtcgaaattatt
ccctcttactatggtattaggttagcagctgtttctggtacaaaagaatatattgacctc
gagaagtggttgaataacaacttaactacacacaaggatgtcttctttaaggagtgcctt
aagttcttaaaggatgtccatcttactggatcactggacctatctggcaaatcttttcat
cagtctggagctgttctgaatctatatgccgaatctactgctaccttcttgaaggttctt
aaatctcatgcggacttagttacctctaggcaactttctgaggatctggagaggttgcat
atatttatagattcaaatccaaggctgcaaaatagtgggactaatgattcatctgcttct
gatggatatgcggatgacattgaagcagaagcaaactcctacttccatcaaatgttttct
gattcgctaagcatgaatgagatggtggaaatgcttgcccgattgaaggaatcttctgtg
aagagggagaaatcaatttttgagtgcatgatcgcaaatttgtttgaggagtatcgtttt
ttccagaagtatcctgaaaggcaactcaaaattgctgctcttctctttggttctgtgatc
aagcaccaacttgtaactcatctttcgcttgggattgctcttcgatatgttcttgatgca
ttacgcaagcctgcagattcaaaaatgtttatgtttggaagtctggcattagagcagttt
gtggatcgtcttcctgagtggcctcagtattgtaatcatattctgcaaatttcccatctg
cgcagtacgcatttggagatagttggtttcattgaagacgctcttgccaggatttcctct
gcacatgcagacggagatggggcgagccttgcttctggtattagtagccataattctgca
ccagctacactagggcatgtagagctcaatgcatctagcatcacacaacctgggcagcag
catatgcctctgcagcttcaacagagacgtgacattcctctggatcatcgttacaaagct
tcttttggacttggttcatctacagatgtaaaaccactcttatcttctctaggtcaatct
tcagttgttacacctcctgatgcttctaatatcaataagttacatagcacagtcagtgcc
tcatcaatgctagcttctggttttgtccgtccttcccgtggagccacttctgctaggttt
gggtccgccttgaacattgaaactttggttgccgctgctgagaaaagagaaactcccatt
gaggctccaggatcagaggttcaggacaagatatcatttataattaataacatttctgtt
gctaatgctgatactaaagctaaagaggtcactgaaattctgaaagaacagtactatcca
tggtttgcgcagtatatggttatgaaaagggcgagcattgagcctaatttccatgatttg
tacctgactttcctggagaaagttaattcaaaggctttgaacaaagagatagtcaagaca
acttatgaaaattgcaaggttcttttaggatcagagcttataaagtcaagttcagaagag
cgttctttgcttaaaaatctggggagctggctaggaaagttaacgattgggcggaaccaa
gtactgagggctcgtgaaatagacccaaaatctttgattattgaggcatatgagaaggga
ctgatgattgctgttattccatttacttcgaagatcctcgaaccatgccaaagcagtctt
gcatatcaaccccctaatccttggacaatgggcattttgggattgcttgctgagatttat
tcaatgccgaacttgaaaatgaacctcaagtttgacatagaggttttattcaaaaattta
agcgtagatttaaaggatgttacccctacttctctcctgaaggatcgtaaaagagcaatt
gaaggaaatcctgatttctctaataaagatgtaggatcttctcaagcacaaatgatttct
gatgtcaaatctggccttgtacctccagtaaatcaagtggactcaccgctcgaggttaca
aatctatctaatactgggggtcatccacatatgctatctcagtatgctggtcctcttcat
atttctacggggacattgatggaggaggagaaggtaacaccaatgggtttgtctgatcaa
cttccctctgctcacgggctgttacaagcaactccaaccccagcacccttttcaattagc
cagaaaaattgctttagctatatgatgtttttttgtttgaatctatgcgacatactaact
ttattcatttattacagagcggtacccattgcaatggatagagctatcaaagagattgtg
tctagtattgttcagcgtagtgtttccatagcaacacaaacaacaaaggagcttgtttta
aaggattattccatggaatcagatgagaatcgtatactaaatgctgcacatttgatggtt
gctagtctggctgggagtttagctcatgttacatgcaaagaacctcttcgagcatcaata
tcaagtcagctgaggacttcacttcagaatttaagtattggaagtgaaattttggaacag
gcagtgcaacttgtcaccaatgataatcttgatcttggttgtgcagtcattgaacaagct
gctactgataaggcaataaacacgattgatacagatatcggtcaacaactttctttgaga
aggaagcatcgagaaggtatgggttctacattttttgatgcaaacttgtatacacaaggt
tctatgggtggcgtgccagattaccttcgtcccaaacctgggcagctgtccctctcacaa
cagcgcgtctatgaggactttgttcggcttccctggcaaaatcagtctagccagacctca
aattcagtgtcctctgttcaatctggcaatgctggttctgtaattacgggatatgaaggg
gtctctcgacaattagatgatatggccgaatctaacctgtcttcacaacttagtgcttcc
tcaattcataatagagctgctgatagttcttcccagcttagtgtggagaaagattctgtt
gcctcattcccttcaactgcctccacccctgagttgcatcaagttgattcttctgatgct
gtgcaagaatctggagcttcttcccaacaactagtttcaccaggtgctgtggagcgtttt
ggaagtagcttcttggaatcttctctcactacaagggatgcccttgataaataccaaatt
gtcgctcaaaagttggaagctttggttaacaatgattccgcggaagcagaaatacaggga
gtcatttctgaagttcctgaaatcatactcaaatgtgttagtcgagatgaggctgcttta
gctgttgctcaaaaggttttcaaacttttgtatgataatgcatcaaacagcattcatgtc
agtgctcatttcgggatcctgactgccattcgtgatgtttgcaagcttgctatgaaggaa
cttactaattgggtaatttactcggaagaagaaaggaaatttaacaagaatattactgtc
ggcctcatccgcagtgaattgctaaaccttacagagtacaatgtttatatggcaaaactc
attgaagggggaaggaacaaggctgctacggagttttccatttctctccttcagaccttg
gttattgaggaacctaaagttattccagaacttcacaatctcgttgatgctttggcaaag
cttgctacgaagcctggatcacctgaaacattaccgcagctggttgagatggttaagaaa
cccgctnnnnnnnnnnnnngaaactcaagttttcatctttctcctctacaaaaacaggat
cctggtctgcttgtagcgaacagggaagagttaatcactgtagagtctgttgaaccagat
cctgctggattccgtgagcaggtttccatggtgtttgcagaatggtataggatatgtgaa
cttcctggtgccaatgatacagcttctgctcacttcatctcacagttgcatcaaaatatt
ttgcttaagggggatgatgtaacagatcgctttttccggctgctgatggaactttctgtt
gcacattgcttatctactgaggttatcaattcaggagcaatgcaatctcctcaacagctg
cagccaatgtcatttcttgcaattgatgtctatgcaaagcttgtcttctcaatcttgaag
ggatcaagcaaactcatccttctttccaagattctggcagtgactgtcagattcattcta
gaggatgtggaggagaagaagatgtcttttaatccaaggccatatttcagattgtttatt
aactggcttctagatcttggttcacttgagcctgttattgatggtgcaaatctccagatt
ttgaccgcttttgccaacgcatttcatgctttgcagcccctcaaagtccctggattcagt
tttgcatggcttgagttgataagtcacaggagcttcatgccaaaaatgctgaccggtaat
gctcaaaagggttggccatatatacaaaggttgcttgtggatcttttccaatttatggaa
ccttttctgaggcatgctgaacttggagactctgttcgacttctctataaaggcacactt
agagtgctcttggtgctacttcatgacttccctgagttcctatgtgactatcactttacc
ttttgtgatgttattcctccgagttgcatacagatgcgaaatatcattctaagtgctttt
ccacgtagtatgcgtctgccagatccatccactcccaatttgaagattgatttgcttcaa
gaaataactcaatcacctcgcgttctttctgaggttgatgctgtgcttaaagcaaagctg
atgaaggctgatgtagatgaataccttaagtcaaggcagcagaattcttcatttttgtct
gatctgaaggagaagctactcctctcatccattgaagccgggtctgttggaactcgttac
aatgtgcctttgatcaactcacttgtgctgtatgttggaatgcaggcaatccaacaactg
cagggtcgaactccccatgcacaatcatcagcaaatgctttcccgttggctgtgttttct
gtcggcgctgcattagatattttccagacactgattatggacttggacacggaaggccgc
taccttttcttaaatgccgttgccaatcaacttcgctacccaaatacgcatacacactac
ttttccttcatccttttgtacttgtttgcagaatcaaaccaggaaattatccaagaacaa
attacaagagtgttgttagagcggctaattgtgaatagacctcatccatggggtctcctc
attacattcattgagctcatcaagaatcctaggtacaatctttggaaccggagtttcata
cga
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integrated database retrieval system
