Lupinus angustifolius (narrow-leaved blue lupine): 109341709
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Entry
109341709 CDS
T04664
Name
(RefSeq) CCR4-NOT transcription complex subunit 1-like
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109341709
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lang03019
]
109341709
Messenger RNA biogenesis [BR:
lang03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109341709
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
109341709
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
ARM_Cnot1
NOT1_connector
Motif
Other DBs
NCBI-GeneID:
109341709
NCBI-ProteinID:
XP_019435205
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Position
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AA seq
643 aa
AA seq
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MAKLIDGGRNKAATEFSISLLQTLVIEEPKVIPELHNLVDALAKLATKPGSPETLPQLVE
MVKKPAASSAALYAGNAGKDDKARQSTDNKDPGLLVANREELITVESVEPDPAGFREQVS
MVFAEWYRICELPGANDTASAHFISQLHQNILLKGDDVTDRFFRLLMELSVAHCLSTEVI
NSGAMQSPQQLQPMSFLAIDVYAKLVFSILKGSSKLILLSKILAVTVRFILEDVEEKKMS
FNPRPYFRLFINWLLDLGSLEPVIDGANLQILTAFANAFHALQPLKVPGFSFAWLELISH
RSFMPKMLTGNAQKGWPYIQRLLVDLFQFMEPFLRHAELGDSVRLLYKGTLRVLLVLLHD
FPEFLCDYHFTFCDVIPPSCIQMRNIILSAFPRSMRLPDPSTPNLKIDLLQEITQSPRVL
SEVDAVLKAKLMKADVDEYLKSRQQNSSFLSDLKEKLLLSSIEAGSVGTRYNVPLINSLV
LYVGMQAIQQLQGRSPHAQSSANAFPLAVFSVGAALDIFQTLIMDLDTEGRYLFLNAVAN
QLRYPNTHTHYFSFILLYLFAESNQEIIQEQITRVLLERLIVNRPHPWGLLITFIELIKN
PRYNLWNRSFIRCAPEIEKLFESVSRSCGGPKPVEESMVPGWV
NT seq
1932 nt
NT seq
+upstream
nt +downstream
nt
atggcaaaactcattgatgggggaaggaacaaggctgctacggagttttccatttctctc
cttcagaccttggttattgaggaacctaaagttattccagaacttcacaatctcgttgat
gctttggcaaagcttgctacgaagcctggatcacctgaaacattaccgcagctggttgag
atggttaagaaacccgctgctagttctgcggctctatatgctggtaatgctggaaaggac
gataaggctagacaatcaacagacaacaaggatcctggtctgcttgtagctaacagggaa
gagttaatcactgtagagtctgttgaaccagatcctgctggattccgtgagcaggtttcc
atggtgtttgcagaatggtataggatatgtgaacttcctggtgccaatgatacagcttct
gctcacttcatctcacagttgcatcaaaatattttgcttaagggggatgatgtaacagat
cgctttttccggctgctgatggaactttctgttgcacattgcttatctactgaggttatc
aattcaggagcaatgcaatctcctcaacagctgcagccaatgtcatttcttgcaattgat
gtctatgcaaagcttgtcttctcaatcttgaagggatcaagcaaactcatccttctttcc
aagattctggcagtgactgtcagattcattctagaggatgtggaggagaagaagatgtct
tttaatccaaggccatatttcagattgtttattaactggcttctagatcttggttcactt
gagcctgttattgatggtgcaaatctccagattttgaccgcttttgccaacgcatttcat
gctttgcagcccctcaaagtccctggattcagttttgcatggcttgagttgataagtcac
aggagcttcatgccaaaaatgctgaccggtaatgctcaaaagggttggccatatatacaa
aggttgcttgtggatcttttccaatttatggaaccttttctgaggcatgctgaacttgga
gactctgttcgacttctctataaaggcacacttagagtgctcttggtgctacttcatgac
ttccctgagttcctatgtgactatcactttaccttttgtgatgttattcctccgagttgc
atacagatgcgaaatatcattctaagtgcttttccacgtagtatgcgtctgccagatcca
tccactcccaatttgaagattgatttgcttcaagaaataactcaatcacctcgcgttctt
tctgaggttgatgctgtgcttaaagcaaagctgatgaaggctgatgtagatgaatacctt
aagtcaaggcagcagaattcttcatttttgtctgatctgaaggagaagctactcctctca
tccattgaagccgggtctgttggaactcgttacaatgtgcctttgatcaactcacttgtg
ctgtatgttggaatgcaggcaatccaacaactgcagggtcgaagtccccatgcacaatca
tcagcaaatgctttcccgttggctgtgttttctgtcggcgctgcattagatattttccag
acactgattatggacttggacacggaaggccgctaccttttcttaaatgccgttgccaat
caacttcgctacccaaatacgcatacacactacttttccttcatccttttgtacttgttt
gcagaatcaaaccaggaaattatccaagaacaaattacaagagtgttgttagagcggcta
attgtgaatagacctcatccatggggtctcctcattacattcattgagctcatcaagaat
cctaggtacaatctttggaaccggagtttcatacgatgcgcaccggagattgaaaaactg
tttgaatcagtgtcaagatcctgtggtggtcctaaaccagtggaagagagtatggtccct
ggttgggtctaa
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