Lupinus angustifolius (narrow-leaved blue lupine): 109346589
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Entry
109346589 CDS
T04664
Name
(RefSeq) sm-like protein LSM4
KO
K12623
U6 snRNA-associated Sm-like protein LSm4
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03018
RNA degradation
lang03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
109346589
09123 Folding, sorting and degradation
03018 RNA degradation
109346589
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lang03019
]
109346589
03041 Spliceosome [BR:
lang03041
]
109346589
Messenger RNA biogenesis [BR:
lang03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109346589
mRNA degradation factors
5'-3' decay
Lsm complex
109346589
Spliceosome [BR:
lang03041
]
Complex B
U4/U6.U5 tri-snRNP components
LSm proteins
109346589
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
LSM
SM-ATX
Motif
Other DBs
NCBI-GeneID:
109346589
NCBI-ProteinID:
XP_019441768
LinkDB
All DBs
Position
LG04:complement(25476999..25479186)
Genome browser
AA seq
152 aa
AA seq
DB search
MLPLSLLKTAQGHPMLVELKNGETYNGHLVNCDTWMNIHLREVICTSKDGDRFWRMPECY
IRGNTIKYLRVPDEVIDKVQEETKSRTDRKPPGVGRGRGRGGSQDGPGGRPAKGIGRGID
EGGARGQGGSRGGRGGIGGKPGGNRGAGRGRG
NT seq
459 nt
NT seq
+upstream
nt +downstream
nt
atgttgcccctttctcttctcaaaactgcccaagggcatccaatgttggtggaactgaaa
aatggggagacatataacgggcatttggttaattgtgatacatggatgaatatccatctc
agagaagttatctgcacctctaaagatggagatagattttggcgtatgcctgaatgctac
attcgtggcaacacgattaagtaccttcgagttcctgatgaggttattgacaaagttcag
gaagaaaccaagagtcgcactgatcgcaaacctcctggtgtgggacgtggaaggggaaga
ggaggtagccaggatggtcctggtggacgtccagcaaaaggaattgggcgtggcattgac
gaaggtggagctagagggcaaggaggaagccgaggaggaaggggtggcataggtggaaag
cccggtggaaacagaggtgcagggcgaggcagaggttga
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