Lupinus angustifolius (narrow-leaved blue lupine): 109361295
Help
Entry
109361295 CDS
T04664
Name
(RefSeq) probable RNA polymerase II transcription factor B subunit 1-1
KO
K03141
transcription initiation factor TFIIH subunit 1
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03022
Basal transcription factors
lang03420
Nucleotide excision repair
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09120 Genetic Information Processing
09121 Transcription
03022 Basal transcription factors
109361295
09124 Replication and repair
03420 Nucleotide excision repair
109361295
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03021 Transcription machinery [BR:
lang03021
]
109361295
03400 DNA repair and recombination proteins [BR:
lang03400
]
109361295
Transcription machinery [BR:
lang03021
]
Eukaryotic type
RNA polymerase II system
Basal transcription factors
TFIIH
109361295
DNA repair and recombination proteins [BR:
lang03400
]
Eukaryotic type
SSBR (single strand breaks repair)
NER (nucleotide excision repair)
TFIIH complex
109361295
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
BSD
PH_TFIIH
SHOCT
Motif
Other DBs
NCBI-GeneID:
109361295
NCBI-ProteinID:
XP_019462269
LinkDB
All DBs
Position
LG11:complement(18679950..18692832)
Genome browser
AA seq
587 aa
AA seq
DB search
MSWSGQVVKRAKFKSSVKDPGTPGLLNLTEEKFVFRPNDPTSKNKLEVELRLIKSHKHTK
EGSNKPPWLNLTHCQGSYIFELESFSDLHVCRDLVGVALSKHGEAAKVISEEQLSPAEMA
LRIKLLQEDSKLQKLHKELVASGKLTESEFWATKKKLLDRDESRKLKQQIGFKNSLIFDT
KPTSDGRINQVKFQLTPEIKYQIFALKPAVHQAFLNFVPKKMTEVDFWNKYFKAEYLHST
KNTVAAAAEAAEDEDLAVFLKDDEILEVEARRKVRQVDPTLDMEADQGDDYTHLPDHGLF
RDGIKEVSEAQNTLYRRTLCQDLNRQGAVVLEGKTSDMEMEPPRTVAEVLARRRQGESDG
VVEEERRNRISKMAQIEDLQAENDHHFAPLCIKDPREYFDSQQVNAVKTLYDSQAGTEKI
RCSLTSEEAYGSLRASISNIKAIGLRDPLFSHEVALKVLNGLTKNISSTKYHLGKNSQES
VLDILPNTTKEKLLDHWVCSQELLRHFWSSYPITTQNLASKTKRLKDAMSQVYSKLEEIK
VSAKSDLRHQVSLVVHPMQQALDAALLHYEADIKKRNAKGQKPNGYV
NT seq
1764 nt
NT seq
+upstream
nt +downstream
nt
atgtcgtggtcagggcaagtggttaaacgtgccaaattcaaaagtagtgtcaaggatcct
ggtacacctggtctcctcaatttgactgaggaaaagtttgttttcaggcccaatgatccc
acatcaaagaacaagctcgaagtggagctcagacttataaagagccataaacacactaaa
gagggatcaaacaaaccaccatggcttaaccttacccattgtcagggaagttacatcttt
gagttggaaagcttttcagatcttcatgtttgccgggatttggtgggtgttgcccttagc
aagcatggagaagctgcaaaagttatttctgaggaacagctgagccctgctgaaatggca
ctcaggattaagctactgcaagaagatagtaagttgcagaagcttcataaggaacttgtg
gctagtggtaaactgacagaatcagaattttgggctacaaagaagaaattgctggatcga
gatgaaagcagaaagttaaaacaacagattggttttaaaaattctttgatctttgatact
aagcctacgagtgatggtcggataaaccaggttaaatttcagttgacaccagagataaaa
tatcagatttttgccctcaaaccagctgttcaccaggcattcctcaattttgtgcctaag
aagatgaccgaggtagatttctggaacaaatattttaaagctgagtatctccacagtacc
aaaaatactgttgcggcagctgctgaggcagctgaagatgaagatcttgctgtgttttta
aaagatgacgagatattagaagttgaagctcggaggaaggttcgacaggttgatccaact
ttagacatggaagcagatcaaggagatgattacactcatcttcctgaccatgggctcttc
cgcgatggtatcaaagaagtatctgaagctcaaaatactctataccggagaacattgtgt
caagatcttaacagacaaggtgctgttgttcttgaaggaaaaacttcagatatggagatg
gagccgccaagaacagtagcagaagttctcgctcggcgaagacaaggggaatctgacggg
gttgtagaggaggagagacgtaacagaatttctaagatggcccagattgaggatcttcag
gcagagaatgatcatcattttgcaccactgtgtatcaaggaccctcgtgagtattttgat
tcccaacaagttaatgcagtaaaaactttgtatgattcccaagctggaacggagaaaata
agatgcagtttgacttctgaggaagcctatggctctttgagagcgtccatatctaatatc
aaagctataggattaagagatcctctatttagtcatgaggttgctcttaaggtccttaat
gggttgactaaaaatatttcaagcaccaaatatcatcttgggaaaaattctcaggagagt
gtacttgatatattgcccaacacaactaaggagaaactattagatcattgggtgtgcagt
caggaattgctgaggcatttttggtcttcatatccaattacaacacaaaaccttgctagt
aagaccaaaagacttaaggatgccatgtcacaagtatactctaaacttgaggagataaaa
gtatccgctaaatccgatctgcggcaccaggtctctcttgttgtccatcctatgcagcag
gctctggatgctgctttattacattatgaagctgacattaagaaaagaaatgcaaaagga
cagaagcctaatggttatgtttag
DBGET
integrated database retrieval system
