Lupinus angustifolius (narrow-leaved blue lupine): 109362321
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Entry
109362321 CDS
T04664
Name
(RefSeq) CCR4-NOT transcription complex subunit 1
KO
K12604
CCR4-NOT transcription complex subunit 1
Organism
lang
Lupinus angustifolius (narrow-leaved blue lupine)
Pathway
lang03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lang00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
109362321
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lang03019
]
109362321
Messenger RNA biogenesis [BR:
lang03019
]
Eukaryotic type
mRNA surveillance and transport factors
mRNA cycle factors
P-body specific factors
109362321
mRNA degradation factors
3'-5' decay
Ccr4-NOT complex
109362321
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Not1
CNOT1_CAF1_bind
CNOT1_TTP_bind
ARM_Cnot1
DUF3819
CNOT1_HEAT
NOT1_connector
Leg1
Motif
Other DBs
NCBI-GeneID:
109362321
NCBI-ProteinID:
XP_019463580
LinkDB
All DBs
Position
LG12:1541987..1566192
Genome browser
AA seq
2402 aa
AA seq
DB search
MTLVIESLSPITMGTFSNTASKQIRFLLNSLNQLNFDSVFHQLIQFTEFGTVGSILLLQT
CLDHFNFARRDMKDIQPERILVDVVKYLLDKPNFNAVFSESVKNVEINESFLESFCNGLE
LSLMEKIAISLSLSDSENPDAKLCGKSFCIAQIEKLCANPGSLNCYELIHDIIMFLKQSE
GLSKYVDSFMQILSLVQFKDTPSFVLNPLLPDEMREAEFLRNMELFHASGDNDFDAILAD
IEKEMNMGEIVNELGYGCTVDVSQCKEIFSLFTPLTESNLSKLLGSIARTHAGLEDNQST
FLTFGAALGYNNLSELPPLNSWNIDVLIDTINQLAPQTNWIRVIEKLDHEGFLLPSEEAF
SFLMSVYNHACKEPFPLRAICGSVWENTEGQLSFLKYAVSAPPEVFTFAHSARQLAYIDA
VNGSKLQTGHSNHAWTCLDLLDVLCQLAERGHANSVRPIFEYPLKQCPEVLLLGMAHINT
AYSLFQHEICLTVFPMILKSTDGSGMILHLWHVNPNLVLRGVMDSQNDDLDNVTRIVDIC
QELKILSSVVEIIPSYYGIRLAAVAGRKEYLDLEKWLDNNLTTYKDFFFEECLKFLKDVH
LTGSQDLSGKSFHQSGAFLNLYAETTATFLKVLKSHTNLVTSTQLSEELERLHISIVDSN
PRLQNGGTTDSSACDGYADDIEAEANSYFHQMFSDSLSMNEMVHMLSRFKESSVKREKSI
FECMIANLFEEYRFFQKYPERQLKIAAVLFGSVIKHQLVTHLSLGIALRYVLDALRKPAD
SKMFMFGSLALEQFVDRLTEWPQYCNHILQISHLRSTHSEIVGFIEQALVRISTGHVDVD
GMSHASGISSHNSAPATLGHVEVKPNASSIIQAGQQHMSLQLQQRRDIPLDDRYRASVGF
GSSTDVKSLLSSAGQSSVVTPLDASNTNKLHSTFSSSSMLASSGFVRPSRGAPSTRFGSA
LNIETLVAAAEKRETPIEAPGSEVQDKISFIINNISIANLETKAKEFTEILKEQYYPWFA
QYMVMKRASIEPNFHDLYLKFLDIVNSKALNKEIVKATYENCKVLLGSELIKSSSEERSL
LKNLGSWLGKLTIGRNQVLRAREIDPKSLIIEAYEKGLMIAVIPFTSKILEPCHNSLAYQ
PPNPWTMGILGLLAEIYSMPNLKMNLKFDIEVLFKNLSVDLKDVTPTSLLKDRKREIEGN
PDFSNKDVGASQAQMISDIKSGLVPPVNQVDLPLEVKNPSNTGGHPHMLSQYAGPLHIST
GTLMEEEKVTPLGLSDQLPSAQGLLQATPTPAPFSLSQIPTQIPNIGTHVIINPKLSSFG
LQMHFQRAVPIAMDRAIKEIVSSIVQRSVSIATQTTKELVLKDYSMESDETRILNAAHLM
VASLAGSLAHVTCKEPLRASISSQLRTSLQNLSIGNEILEQAVQLVTNDNLDLGCAVIEQ
AATDKAINTIDTDIGQQLSLRRKHREGMGSTFFDSNLYTQGSMGGVPDYLRPKPGQLSLS
QQRVYEDFVRLPWQNQSSQSSNSLSAVQSGNADLSGNSGSVSMGYEGVSRQVDDMAESNL
ASQFSASSIQNRAADSSSQLSLEKDSVASFPSTASTPELHAVDSSDAVKESGASSQPQVS
SGVVERFGSSFSESSLTTRDALDKYEIVVQKLEALVNNDSTEAEIQEVISEVPEILLRCV
TRDETAIAVAQKVFKGLYDNASNSIHVGAHLGILTAIRDVCKLAVKELTSWVTYSEEERK
FNKDITVGLIRSELLNLTEYNGHMSKLIDGGRNKAATEFSISLLQTLVIEEPKVISELHN
IVDALAKLATKPGSPESIPQLVEMVKNPTASAAGNAGKDDKARQSRDNKGPGMLVANREE
LTSVESVEPDPAGFREQVSMSFTEWYRICELPGANDTASSHFILQLHQNGLLKGDDLTDR
FLRLLMELAVAHCLSTEVINSGGLQSPQQLQPMSFLAIDVYAKLVFSILKGSNKVFLLSK
ILSVTIRFILKDVDEKKMSFNPRPYFRLFINWLVDLGSLEPVTDGANLQILTAFANAFHA
LQPLKVPGFSFAWLELISHRSFMPKMLTGNGQKGWPYIQRLLVDLFQFMEPFLRHAELGD
SVRLLYKGTLRVLLVLLHDFPEFLCDYHFTFCDVIPPSCIQMRNIILSAFPRSMRLPDPS
TPNLKIDLLQEITQSPRILSEVDAALKAKQMKADVDEYLKTRQQNSPFLSELKEKLLLSP
SEAASAGTRYNVPLINSLVLYVGMQAIQQLQGRTPHAQSAANAFPLAVFSVGAALDIFQT
LIMDLDTEGRYLFLNAVANQLRYPNTHTHYFSFILLYLFAESNQEIIQEQITRVLLERLI
VNRPHPWGLLITFIELIKNPRYNFWNRSFIRCAPEIEKLFESVSRSCGGPKPVDESMVSG
WV
NT seq
7209 nt
NT seq
+upstream
nt +downstream
nt
atgactcttgttattgaatccctttcacccattactatgggcactttttccaacacagct
tcgaagcagattcgatttctgctcaattccttgaaccagctcaactttgactctgttttt
catcaactcattcagttcactgaatttggcactgttgggagcattttgctgcttcaaaca
tgcttggatcatttcaactttgccagaagagatatgaaagacattcagcccgagagaatt
cttgtcgatgttgtcaagtacctcttggacaaacctaacttcaatgcagttttttctgag
tctgtgaagaatgtggaaatcaatgaaagctttttagaaagtttttgtaatggattggag
ttgtctttaatggaaaaaattgccatcagtctttctttatctgattctgaaaaccccgat
gccaagctttgcggcaagagcttttgcatagctcagattgagaaattgtgtgccaatcct
ggttctttgaattgctatgagctaattcatgatattatcatgttcctcaagcagtctgag
ggtctttccaagtatgtagattcctttatgcagatattatcgctggtgcagttcaaggac
acaccgtcttttgttttgaatccattgcttcctgatgagatgcgcgaggctgagttttta
aggaatatggagctgttccatgcgagtggagataatgattttgatgctattttggccgac
atcgagaaggaaatgaacatgggagagattgtgaatgaattaggctatggatgtacagtt
gatgtctcacagtgcaaggaaatcttttcgctcttcacacctttaactgaaagcaacctc
tctaaattacttggttctattgctcgtacccatgctgggctggaggacaaccagagcaca
ttcttaactttcggcgcagcccttggctacaacaacttgtctgagttgccaccattgaac
tcttggaatattgacgtcttgatagatacaatcaatcagcttgcacctcagaccaattgg
atacgggttattgaaaaacttgatcatgaagggtttttgcttcctagtgaagaagcattc
tcttttctcatgtctgtatataatcatgcctgcaaggagccgtttcctctccgtgccatc
tgtgggtctgtatgggagaacactgagggtcaattatctttcctcaaatatgctgtatct
gcaccaccagaagtgttcacctttgcccactctgcaagacaactggcatatatcgatgca
gttaatggttctaagcttcaaactggacattctaaccatgcatggacatgtcttgacctt
ttggacgtcctttgccagctagctgagaggggtcatgccaattctgttcgaccgattttt
gagtatcccctgaaacagtgccccgaagtcttgcttcttgggatggcacatatcaatact
gcttatagcctcttccagcatgaaatatgtctgactgtttttcccatgatattaaaaagt
accgatggcagtgggatgattctacacctttggcatgttaatcccaatctggttttgcga
ggggttatggattctcaaaacgatgacttagacaacgttacaagaattgtggacatctgc
caggaactaaagattctatcatctgtggtggaaattattccctcctactatggtattagg
ttagcagctgttgctggtagaaaagaatatcttgaccttgagaagtggttggataacaat
ttaactacatacaaagatttcttctttgaggagtgccttaagtttttaaaggatgtacat
cttactggatcacaagacctatctggcaaatcttttcaccagtctggagcttttctgaat
ctgtatgctgagactactgctaccttcttgaaggttcttaaatctcataccaacttggtt
acgtccacacaactttctgaggagctggagaggttgcatatttctatcgtagattctaat
ccaaggctgcaaaatggtgggactactgattcatctgcttgtgatggatatgcggatgac
atcgaagccgaagcaaactcctacttccatcaaatgttttctgattcgctaagcatgaat
gagatggtgcatatgctttcccgattcaaggaatcttcagtaaagagggagaaatccatt
ttcgaatgcatgatcgctaatttgtttgaggagtatcgattttttcagaagtatcctgaa
aggcaactcaaaattgctgctgttctctttggttctgtgatcaagcatcaacttgtaact
catctttcgctggggattgctcttcgttatgttcttgacgcgttacgcaagcctgcagat
tcaaaaatgtttatgtttggaagtctggcattggagcagtttgtggatcgtcttactgag
tggccacagtattgcaatcacattctacaaatttcccatttacgcagtacacattcagag
atagttggtttcattgaacaggctcttgtcaggatttcaactggtcatgtagatgtagat
gggatgagccatgcttctggtattagtagccataattcagcaccagctacattagggcat
gtagaggtaaaacccaatgcatctagcatcatacaagctggacagcaacatatgtctctg
cagcttcaacagagacgtgacattcccctggatgatcgttacagagcttctgttggattt
ggttcatctaccgatgtaaaatcactcttatcttctgctgggcaatcttcggttgttaca
cctcttgatgcttctaataccaataagttacacagcacattcagttcatcttcaatgcta
gcttcatctggttttgtccgtccttcccgtggagctccttctacaaggtttggatctgcc
ttgaacattgaaactttggttgctgccgctgagaaaagagaaactcccattgaggctcca
ggatcagaagttcaagacaagatatcatttataattaataatatttcgattgctaatctt
gaaactaaagcaaaagagttcaccgaaattttgaaggagcagtactatccatggtttgcg
cagtatatggttatgaaaagagcgagcattgagcctaatttccatgacttgtacctgaaa
ttcctggatatagttaattcaaaggctttgaacaaagagattgtcaaggcaacatatgaa
aattgcaaggttcttttaggatcggagcttataaagtcaagttctgaagagcgctctttg
cttaaaaatctggggagctggctaggaaagttaactattggacggaatcaagtactgagg
gctcgagaaatagacccaaaatctttgattatagaggcatatgagaagggactgatgatt
gctgttattccatttacttcaaagatccttgaaccatgccataacagtcttgcttatcaa
ccccctaatccttggacaatgggcattttgggattgcttgctgagatttattcaatgccg
aacttgaaaatgaacctcaaatttgacatagaggttttattcaaaaatttaagcgtagat
ttgaaggatgtgaccccaacttctcttctgaaggatcgtaagagagaaattgaaggaaat
cctgatttctctaataaagatgtaggagcatctcaagcacaaatgatttctgatataaaa
tctggccttgtacctccagtaaatcaagtggacttgccgcttgaggttaagaatccatct
aatactgggggtcatccacatatgttatctcagtatgctggtcctcttcatatttctacg
ggaacattgatggaagaggagaaggtaacacctctgggcttgtctgatcaacttccctct
gcccaaggactattacaagcaactcctaccccagcacccttttcccttagccagatccca
actcagatacctaatatcgggactcatgttattatcaatccaaagctcagtagttttggg
ttgcaaatgcattttcagagagccgtacccattgcaatggatagagctatcaaagagatt
gtgtctagtattgttcagcgtagtgtttccatagcaacacagacaacaaaggagcttgtt
ttaaaggattattccatggaatcagacgagactcgaatattaaatgctgcacacttgatg
gttgctagtctggctgggagtttagctcatgttacatgcaaagaacctctgcgagcttca
atatcaagtcagctgaggacttcacttcagaatttaagtattggaaatgaaattttggaa
caagctgtgcaacttgtcaccaatgataatcttgatcttggttgtgcagtcattgaacaa
gctgctactgacaaggcaataaacacaattgatacagatattggtcaacaactttctttg
agaaggaagcatcgagaaggtatgggttccacattttttgattcaaacttgtatacacaa
ggttccatgggtggtgtgccagattaccttcgccccaaacccggccagttgtccctctca
caacaacgtgtctatgaggactttgttcgtctaccctggcaaaatcagtctagccagagc
tcaaattctttgtctgctgttcaatctggcaatgctgatctctctggcaacagtggttct
gtaagcatgggatatgagggggtctctcgacaagtagatgatatggccgaatctaatctc
gcttcacaatttagtgcttcctcaattcaaaatagagctgctgacagttcttcccagctt
agcttggagaaagattctgttgcctcattcccttcaactgcctccacccctgagttgcat
gcagttgattcatctgatgctgtgaaagaatctggagcttcttcccaaccccaggtttca
tcaggtgttgtggagcgttttggatctagcttctcggaatcttctctcactacgagggat
gccttggataaatacgaaattgttgttcaaaagttggaagctttggttaacaatgattcc
acggaagcagaaatacaagaggtcatttctgaggttcctgaaatcttactcagatgtgtc
actcgagatgagaccgctatagctgtggctcaaaaggttttcaaaggtttgtatgataat
gcatcaaacagcattcatgtcggtgctcatctcgggatcctgactgccattcgtgatgtt
tgcaagcttgctgtcaaagagcttactagttgggtaacgtactcggaagaagaaaggaaa
tttaacaaggatattactgttggcctcatccgcagtgaattgctaaatcttacagagtac
aatggtcatatgtcaaagcttattgatgggggaaggaacaaggctgctacggagttttcc
atctctcttcttcagaccttggttattgaggaacctaaagttatttcagaacttcacaat
atcgttgatgctttggcaaagcttgctacaaagcctggatccccggaatcaataccacaa
ctggttgagatggttaagaatcccactgctagtgctgctggtaatgctggaaaggacgac
aaggcaagacaatcaagagacaacaagggtcctggtatgcttgtagcaaacagggaagag
ttaaccagtgtagagtctgttgaaccagatcctgctggattccgtgagcaggtttccatg
tcgttcacagaatggtataggatatgtgaacttcctggtgccaatgatacagcttcttcc
cacttcatcttacagttgcatcaaaatggtttgcttaagggggatgatttaacagatcgc
tttttacggctgttgatggaacttgctgttgcacattgcttatccactgaggtgatcaat
tcaggaggattgcaatctcctcaacagctgcagccaatgtcatttcttgcaattgatgtc
tatgcgaagcttgtcttctcaatcttgaagggatcaaacaaagtctttcttctttccaag
attctgtcagtgaccatcagattcattctaaaggatgtggatgagaagaagatgtctttt
aatccaagaccatatttcagattgttcattaactggcttgtagatcttggttcacttgag
ccggttactgatggtgcaaatctccagattttgactgcttttgccaatgcatttcatgct
ttgcagcccctcaaagtccctggattcagttttgcatggcttgagttgataagtcacagg
agcttcatgccaaaaatgttgactggtaatggtcaaaaaggttggccatatatccaaagg
ttgcttgtggatctgttccaatttatggaaccttttctgagacatgctgaacttggagac
tctgttcgacttctctataaaggcacacttcgggtgctcttggtgctacttcatgacttc
ccagagttcctatgtgactatcactttaccttttgtgatgttattcctccgagctgcata
cagatgcgaaatatcattctaagtgcctttccgcgtagtatgcgtctgccagatccatcg
actcccaatttgaagattgatttacttcaagaaataactcaatcacctcgcattctttct
gaggttgatgctgcacttaaagcaaagcagatgaaggctgatgtagatgaataccttaag
acaaggcagcagaattctccatttttgtctgaactgaaggagaagctactgctctcacca
agtgaagctgcctctgctgggactcgttacaatgtgcctctgatcaactctcttgtgctt
tatgttggaatgcaggcaatccagcaactgcagggccgaactccacatgcacaatcagca
gcaaatgctttcccattggctgtattttctgtcggtgctgcattggatattttccagaca
ctgattatggacttggacacggaagggcgctaccttttcctaaatgcggttgccaaccaa
ctccgttacccaaatacacatacacactacttttccttcatccttctgtacttgtttgca
gaatcaaaccaggaaataatccaagaacagattacaagagtgttgttagagagactaatt
gtgaatagacctcatccatggggcctcctcattactttcattgagcttatcaagaatcct
aggtacaatttctggaataggagtttcataagatgtgctcctgagattgaaaaactgttt
gaatcagtgtcgagatcatgtggtggtcctaaaccagttgatgagagtatggtctctggt
tgggtctaa
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