Labrenzia sp. CP4: ACP90_14460
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Entry
ACP90_14460 CDS
T04295
Name
(GenBank) RNA-binding protein Hfq
KO
K03666
host factor-I protein
Organism
lap
Labrenzia sp. CP4
Pathway
lap02024
Quorum sensing
lap03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lap00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
ACP90_14460
09140 Cellular Processes
09145 Cellular community - prokaryotes
02024 Quorum sensing
ACP90_14460
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lap03019
]
ACP90_14460
03036 Chromosome and associated proteins [BR:
lap03036
]
ACP90_14460
Messenger RNA biogenesis [BR:
lap03019
]
Prokaryotic type
Bacterial mRNA degradation factors
Other RNA degradation factors
Chaperones
ACP90_14460
Chromosome and associated proteins [BR:
lap03036
]
Prokaryotic type
Nucleoid associated proteins
Other nucleoid associated proteins
ACP90_14460
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
Hfq
Hfq_1
AcMNPV_AC11
Motif
Other DBs
NCBI-ProteinID:
AMN53432
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All DBs
Position
3101417..3101671
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AA seq
84 aa
AA seq
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MAERAQNLQDTFLNHVRKQKTPLTIFLINGVKLQGVVTWFDNFCVLLRRDGHSQLVYKHA
ISTIMPNGPVQLFDQAEENAEKAS
NT seq
255 nt
NT seq
+upstream
nt +downstream
nt
atggctgagcgcgcacaaaatctccaagacacttttcttaatcacgttcgcaagcaaaaa
actcctctgacgatttttctgatcaacggtgtgaaattgcagggtgtcgttacctggttc
gacaacttctgcgttctgctgcgtcgtgatgggcattcccagctggtttacaaacacgcg
atttccacaattatgccaaacggacctgttcaactgttcgatcaggctgaggaaaacgct
gaaaaggcaagctga
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