Lysobacter antibioticus ATCC 29479: GLA29479_4598
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Entry
GLA29479_4598 CDS
T04526
Symbol
hlyB
Name
(GenBank) alpha-hemolysin translocation ATP-binding protein HlyB
KO
K12531
ATP-binding cassette, subfamily B, bacterial RtxE
Organism
laq
Lysobacter antibioticus ATCC 29479
Pathway
laq02020
Two-component system
Brite
KEGG Orthology (KO) [BR:
laq00001
]
09130 Environmental Information Processing
09132 Signal transduction
02020 Two-component system
GLA29479_4598 (hlyB)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
02000 Transporters [BR:
laq02000
]
GLA29479_4598 (hlyB)
02044 Secretion system [BR:
laq02044
]
GLA29479_4598 (hlyB)
Transporters [BR:
laq02000
]
ABC transporters, eukaryotic type
ABCB (MDR/TAP) subfamily
ABCB-BAC subgroup
GLA29479_4598 (hlyB)
Secretion system [BR:
laq02044
]
Type I secretion system
RTX toxin transporter
GLA29479_4598 (hlyB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
ABC_membrane
ABC_tran
Peptidase_C39
SMC_N
AAA_16
AAA_18
AAA_22
ABC_ATPase
AAA_21
AAA_29
nSTAND3
SbcC_Walker_B
Rad17
PRK
MeaB
CoaE
AAA_30
APS_kinase
Cytidylate_kin
Motif
Other DBs
NCBI-ProteinID:
ALN65429
LinkDB
All DBs
Position
complement(5029833..5031980)
Genome browser
AA seq
715 aa
AA seq
DB search
MSKSTESSRPIEGVGGAFVDEGLAALAYAARHYQIMVEAEQLCHQLGRAQGAASGVDICR
CARSIGLRARSIDSGIERIAALPLPALLKTADGWRVLESVSEAGALVRVPTTGERQLSSF
DDLAERWQGHTILLGEKSEPSGRQAFGFAWFIPSVIKHIRQFRNILLVSMMLQLIALVTP
AVFENVIDRVLLNRSTSSLQVLGIALLALAVFDFVYGFLRSWLFSNLAAKINSELSARVY
RHLMALPIGYFRKRQTGEIVARMSELDSIRQFLTGSTLTVVLDLLFLGLFVAVMLSYSVE
LTWVVLGTLLVYFSLWMVFGPVLRNRTEREYELSADNTAFLTASVMGIEVIKTTATEESS
LRQWESGFARFVRASFRASVLGISIGQSVDLVRKLSSALLLWWGISLVMEGKLSPGELVA
FNMLAGHLTQPILRLAQAWQDLQHTTISLRRIGDVLDEPTEHGNGGLASIPALQGGVCFR
NVHFRYGEDGQEVLRNLCLDVRPGEFVGITGPSGSGKSTISRLLQRLYLPQRGQVLVDGI
DIAIADPVALRRQISVVPQESVLFSGTVSENISLCRPQASEAEIVEAATLAGADSFIRCL
PRGYDSQVGEKGSGLSGGQRQRIALARALLARPRLLLLDEATSALDYESEAAIMANLEAI
ARGRTVISIAHRLNTLRYADRILVVDRGAVVESGSHRELVARDTAYARLWRLQMG
NT seq
2148 nt
NT seq
+upstream
nt +downstream
nt
atgtccaagtcgaccgaaagctctcgccccatcgaaggcgtcggcggtgccttcgtcgat
gaaggcttggcggctctggcctacgccgcccgccattaccagattatggtcgaggccgag
cagctctgccatcaactcggccgagcgcagggggcggccagcggagtcgacatttgccgt
tgcgcgcgttcgatcggattgagagcgagaagtatcgacagcggcatcgagcggatcgcg
gcattgccgctgccggcgttgttgaagactgccgacggatggcgagttctggaatcggtg
agcgaggctggcgcgcttgtgcgtgttccgacgacaggggagcgccagctctcgtctttc
gacgaccttgccgagcgctggcaaggccacacgatccttctgggcgaaaagagcgaacca
tcgggacgacaggcgttcggcttcgcctggttcattccgtcggtgatcaaacacatccgg
cagttcagaaatattctgttggtgtcgatgatgctgcaactgatcgcgttggtgacgcct
gcggtgttcgagaacgtcattgatcgggtcttgctgaatcgaagcacctcaagcttgcaa
gtgctgggaatagcgctgctcgcattggcggtattcgatttcgtctatggattcctgcgt
tcctggttgttctccaatctcgcggcgaagatcaactcggagctatccgcccgcgtctat
cggcatctgatggcgttgcccatcggctactttcgcaagcggcaaaccggcgaaatcgtc
gctcgcatgagcgagctggatagcatccgccagtttctgaccggatcgacgctgaccgtg
gtgctggacctgctgttcctggggctgttcgtcgcggtaatgctttcctacagcgtcgag
ctgacgtgggtcgtcctgggaactttgctggtctatttttcattgtggatggtgttcggc
cctgtgttgcgcaaccgcaccgagcgcgaatacgaattgagcgccgataacaccgcgttc
ttgaccgcgtcggtcatgggcatcgaggtcataaagacaacggccacggaggagagctcc
ctgcgtcaatgggagagcgggttcgccaggttcgtacgcgcctcgttccgggccagcgtg
ctgggcatatcgatcggtcaatcggtcgatctggtgcggaagctgtccagtgcgctgctg
ctgtggtggggcattagcctggtgatggaaggcaagctgagtccgggcgagctggtggcg
ttcaatatgctcgcggggcatttgacccagccgattctgcgcctggcccaggcgtggcaa
gacttgcagcacacgaccatctccttgcgccgcataggcgacgtgctcgatgagccgacc
gagcacggcaacggcgggttggcttcgatcccggccctgcagggcggcgtctgctttcgg
aatgtgcacttccgctatggcgaagacggtcaagaagtgttgcgcaatctctgtctggac
gtgcgccccggcgagttcgtcggtatcaccgggccctccggatcgggcaagagcacgatc
agccgattgttgcaacgtctctacctgccccagcgcggccaggtactggtggacggaatc
gacatcgcgatcgcggatccggttgcgctgcgtaggcagatcagcgtggttccgcaggaa
agcgtgctgttctcgggaacggtgagcgaaaacatcagcttatgcaggccgcaagcgtcc
gaagccgagatcgtcgaggcagctaccctagccggtgccgattcgttcatacgatgcctg
cctcgcgggtacgacagccaggtcggcgaaaagggatcgggtttgtcgggcgggcagcgc
cagcgcatcgcgttggccagggcgctgcttgcccgtcccaggctgttgttgctcgatgaa
gccaccagcgcgctggattacgaatcggaggcggcgatcatggccaatctggaggccatc
gccagaggacgcacggtgatcagcatcgcgcaccggctaaatacgctgcgctatgccgac
cgcatcctggtggtcgatcgcggagcggtcgtcgaaagcgggtcgcatcgcgagctggtc
gcgcgcgacacggcctatgcccgattgtggcgattgcaaatgggctga
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