Loxodonta africana (African savanna elephant): 100654641
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Entry
100654641 CDS
T04351
Symbol
SMC1B
Name
(RefSeq) structural maintenance of chromosomes protein 1B
KO
K06636
structural maintenance of chromosome 1
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav04110
Cell cycle
lav04114
Oocyte meiosis
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09140 Cellular Processes
09143 Cell growth and death
04110 Cell cycle
100654641 (SMC1B)
04114 Oocyte meiosis
100654641 (SMC1B)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03036 Chromosome and associated proteins [BR:
lav03036
]
100654641 (SMC1B)
Chromosome and associated proteins [BR:
lav03036
]
Eukaryotic type
Sister chromatid cohesion proteins
Cohesin complex
100654641 (SMC1B)
Meiosis-specific proteins
Cohesin complex and associated proteins
100654641 (SMC1B)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SMC_N
SMC_hinge
AAA_21
AAA_15
AAA_23
AAA_29
Ca_chan_IQ
Motif
Other DBs
NCBI-GeneID:
100654641
NCBI-ProteinID:
XP_003420933
UniProt:
G3TBD2
LinkDB
All DBs
Position
Unknown
AA seq
1235 aa
AA seq
DB search
MGHLELLLVENFKSWRGRQVIGPFKRFTCIIGPNGSGKSNVMDALSFVMGEKITNLRVKN
IQELIHGAHIGKPVSSFASVKIVYVEESGEEKTFARIIRGACSEFHFDDKPVSRSAYLAE
LEKIGIIAKARNCLVFQGTVELISMKKPKERTQFFEEISSSGELIGEYEEKKKKLQKAEE
DAQFNFNKKKSVAAERKHAKLEKEEADRYQSLLEELKINKIQLQLFRLYHNERKIRSLNT
ELEHVNRELSVTKESLSHQENIVKAKKKEHGMLTRQLQQTEKELKSVEALLNQKKPQYIK
AKENTSHHLKKLDVAKKSIKDSEKQRSKQEDDIRALEAELVDLDVAWKSFEKQVEEEILY
KGREIELEASQLDRYKELKDKVRKKVAIMTQQLEKLQREQKADEDRLAFEKRRHGEVQGN
IKQIHEQIEDHKKRIEKLEEYTKTCIDCLKEKKQQEEILEDEIKKAKSRMSEVNEELNLI
RSELQNAGIDKHEGKRQQKRAEVLEHLRRLYPESVFGRLLDLCHPIHKKYQLAVTKLFGR
YMVAIVVASEKVAKDCIRFLKEERAEPETFLALDYLDIKPINERLREIKGCKMAIDVIKT
QFPQLKKVIQFVCGNGLVCETVEEARHIAFGGPERRKTVALDGTLFLKSGVISGGSSDLK
YKARYWDEKELKSLKDRRTQLIQELKGLMKTLRKETDLKQIQTLAQGTHTRLKYSQSELE
MIKKKHLAAFYREQSQLQSELLNIESQCAMLREGIKERQQRIEEFQEKIDKVEDDIFQHF
CEEIGVENIREFENKHVKRQQEIDQKRLEFEKQKTRLNVQLEYSRNHLKKKQNKIDALKE
TLQKGTEDTDNLKKTEENCLQIVNELRDKRQQLKDMFVTQNSNIEKVQAQVEEERKKLLA
VDREVGKLQKEVVKIQTSLEQKRLEKHNMLLDCKVQDIEIVLLLGSLDDIIEVELGAEAE
STQATIDIYEKEEAIEVDYSSLREDLKALQTDKEVEAQLTLLLQQVASQEDILLKTAAPN
LRALEKLKTVRDKFQESADAFEASRKEARICRQEFEQVKKRRYDLFSQCFEHVSISIDQI
YKKLCRSDSAQAFLSPENPEEPYLEGISYNCVAPGKRFMPMDNLSGGEKCVAALALLFAV
HSFRPAPFFVLDEVDAALDNTNIGKVSSYIREQTQEQVQMIIISLKEELYSRADALIGIY
PEHDDYMFSRVLTLDLSQYPDTEDQESSRGHRESR
NT seq
3708 nt
NT seq
+upstream
nt +downstream
nt
atgggccacctcgagctgctgctcgtggagaatttcaagtcgtggcggggccgccaggtc
attggccccttcaagaggttcacctgtatcatcggccccaacggctctggaaaatctaat
gtaatggatgcacttagttttgtaatgggagaaaaaataactaatttaagagtgaaaaat
atccaagaacttattcatggagcccatattgggaaacctgtttcttcttttgcaagtgta
aagattgtctatgtggaggaaagtggagaagagaaaacatttgcaagaattattcgaggg
gcatgctcagaatttcattttgatgacaaacctgtgagtcgttctgcctacttagcagag
ttggagaagataggcataatagccaaagcgagaaactgtctagtttttcagggaaccgta
gagttgatttcaatgaaaaagcccaaagaaagaactcagttttttgaagaaatcagcagt
tcaggagagcttataggagaatatgaggaaaagaaaaaaaagttacagaaagcggaagag
gatgcacagtttaattttaataagaaaaaaagtgtggctgcagagcgcaaacatgcaaaa
ttagagaaggaagaggcagaccgttaccagagtctacttgaagaactgaaaataaacaag
atacaactgcagcttttccgactatatcataatgagagaaaaattcgttctctgaacact
gagttagagcatgtgaatagagagttgagtgtcacgaaagagtctctttctcatcaggaa
aatatagttaaagccaagaaaaaggaacatggaatgctaactaggcaactgcaacaaaca
gaaaaagaattaaaatctgtggaagcacttttaaatcagaagaagcctcagtacattaaa
gccaaagaaaatacttctcaccacctcaagaaattagacgtagctaaaaaatcaataaag
gacagtgaaaaacaacgttctaaacaggaagatgacataagagccctggaagcagaactg
gttgatttagatgttgcatggaaaagttttgaaaagcaggttgaggaagaaatcttatat
aaagggagagagattgagctggaagcaagtcagctggatcgttataaggaacttaaagat
aaagtaagaaagaaagtggccataatgacccaacagctggagaaactgcagcgggagcag
aaggctgatgaagacagactggcgtttgaaaagaggaggcatggagaagttcagggaaat
ataaagcaaatacatgaacaaatagaagaccataaaaagagaatagagaagttggaggag
tatacaaagacatgcattgattgcttgaaagagaaaaaacagcaagaggaaatcctggag
gatgaaattaaaaaagcaaaatcaagaatgtctgaagttaatgaagaactgaatcttatt
agaagtgagctgcagaatgctggaattgataagcatgagggaaaacgccagcaaaaaaga
gcagaggttctggaacacctcagaaggctgtacccagagtctgtgtttggaagactgcta
gacctgtgccatcctattcataagaaataccagctggctgttaccaaactatttggtcgg
tacatggttgccattgtggtcgcctctgaaaaggtagcgaaagactgcattcgatttctg
aaagaggaaagagctgaacctgagacattccttgctctagattaccttgatatcaaacca
atcaatgaaagattaagagagattaaaggctgtaaaatggcgatagatgttataaagact
cagttccctcagctgaagaaagtgattcagtttgtgtgtgggaatggcctcgtctgtgag
acggtggaagaagcaaggcatattgcatttggtggacctgaaagacggaagacagtagct
cttgatggaacattatttctaaaatctggggtgatctccggagggtcaagtgatttgaaa
tacaaggctagatactgggatgagaaagagttaaagagtttaaaagacagaagaacccag
ctaatccaagaactaaagggcttaatgaagacacttcgcaaggagacggatttgaaacaa
atacagaccctagcacaaggaactcatacacgactcaaatattcacaaagtgaactagag
atgattaaaaagaagcaccttgctgctttttacagggaacagtctcagctacaaagtgaa
ctactaaatattgagtctcaatgtgctatgctgagggaaggaatcaaagaacgacaacaa
agaattgaagaatttcaggagaaaatagataaggtggaggatgatattttccaacacttc
tgtgaagaaattggcgtggaaaatattcgtgaatttgagaacaaacatgttaaacggcaa
caggaaattgatcaaaaaagattagaatttgagaaacaaaaaactcggctaaacgttcaa
cttgaatatagccgcaaccacctgaagaagaaacagaataaaattgatgcattaaaagaa
actctgcagaaaggtacagaagacactgataacctgaagaagaccgaagaaaactgcctg
caaattgtgaatgaactcagggataagcgtcagcaacttaaggacatgtttgtcactcag
aattccaacattgagaaggtccaagctcaagttgaagaggaacggaagaagcttttggct
gttgacagggaagtgggaaaattgcaaaaagaagttgtgaaaattcaaacttctctggaa
cagaaacgattggagaagcataacatgctgcttgattgcaaagttcaagacatcgagata
gttcttctgctgggatcactggatgacatcattgaagtggagttgggagctgaagccgaa
agtacccaggcaaccatcgacatatatgaaaaagaagaagccattgaagtagactacagc
tctctgagagaggatttgaaggctctacagacagataaagaagttgaggcccagctcaca
ctgttgctgcagcaagtagcatcccaggaagatattttattgaagacggctgctcccaac
ctaagagccctggagaagttgaagacagtcagagacaagtttcaggagtccgcagacgct
tttgaggccagcagaaaggaagccagaatctgtaggcaagagtttgaacaggtgaaaaaa
aggagatacgatcttttcagccagtgttttgagcacgtgtcgatctcaattgatcaaatc
tacaagaagctctgcagaagcgacagcgcccaagcatttcttagcccagagaaccctgaa
gaaccttacttggaggggatcagctataactgtgtggccccaggcaaacggtttatgccg
atggacaacctgtcagggggagaaaagtgcgtggcggcgctggcactcctgttcgctgtg
catagctttcggcccgcccccttctttgttttagatgaagtggatgcagccctggacaat
accaacatcggcaaagtatctagttacatcagagaacagactcaagagcaggttcagatg
ataatcatttccctgaaagaggagctctactccagagccgacgccctgatcggcatctat
ccagagcacgatgactacatgttcagccgggtcctgaccctcgatctctcccagtaccca
gacactgaagaccaggaaagcagcaggggacaccgggagtcccgatag
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