Loxodonta africana (African savanna elephant): 100659441
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Entry
100659441 CDS
T04351
Symbol
BRIP1
Name
(RefSeq) Fanconi anemia group J protein
KO
K15362
fanconi anemia group J protein [EC:
5.6.2.3
]
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav03440
Homologous recombination
lav03460
Fanconi anemia pathway
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
100659441 (BRIP1)
03460 Fanconi anemia pathway
100659441 (BRIP1)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lav03400
]
100659441 (BRIP1)
Enzymes [BR:
lav01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.3 DNA 5'-3' helicase
100659441 (BRIP1)
DNA repair and recombination proteins [BR:
lav03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
BRCA1-B complex
100659441 (BRIP1)
FA (Fanconi anemia) pathway
Downstream FA components
100659441 (BRIP1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Helicase_C_2
DEAD_2
DEAD
IGR
Motif
Other DBs
NCBI-GeneID:
100659441
NCBI-ProteinID:
XP_010592894
LinkDB
All DBs
Position
Unknown
AA seq
1168 aa
AA seq
DB search
MMSSVWSEYTIGGVKINFPCKAYPSQLAMMNCIVRGLNSKQHCLLESPTGSGKSLALLCS
ALAWQQSLSGKPVDEGLSKKAEVPPSCSCTCHSKNFPNNDIMNPGTSHHFGSPSTPPSER
NITSSTCQDSPEKNTLAAKLSAKKQASVCRNENDDFQVDKKRIRLLETTQQIRKRHSFEK
EVHHLDAKVASGKAVKLNSPSGTTNSFSLQSPPGHCSRCCCSPKQGNSQDSSNAIKKDHG
GKSKIPKIYFGTRTHKQIAQITRELRRTAYSGVPMTILSSRDHTCVHPEAVGNFNRKEKC
MELLDGKNGKSCYFYHGVHKIRDQHTLQTLQGIRETMDINLKEQVVILDEAHNIEDCARE
SASYSVTEVQLWFARDELDSMVNNNIRKKDHDPLRAVCYSLIHWLEAHSEHLVERHYESS
CKIWSGNEMIFHLHKMGITSATFPILQGHFSAVLQKEEKVSSVHGKEEAREIPVISASTQ
VMLKGLFMVLDYLFRQNSRFADDYKVAIQQTYSWINQTDTSDRNEFFALPKNKKRSRQKT
AVHVLNFWCLNPAVAFSDIDEKVQTIVLTSGTLSPMKSFSSELGVTFTIQLEANHVINNS
QVWVGTIGSGPTGRNLCATFQHTETFEFQDEVGALLLSVCQTVSQGILCFLPSYKLLEKL
KERWHSTGLWRNLELVKTVIVEPQGGDKTEFDELLQVYYDAVKYRGEKDGALLVAVCRGK
VSEGLDFSDDNARAVITVGIPFPNVKDLQVELKRQYNDQHSKLRGLLPGRQWYEIQAYRA
LNQALGRCIRHKNDWGALILVDDRFRSNPSRYISGLSKWVRQQIQHHSTFESALESLTEF
SKKHLKVIDVSIQDRKSIQDSECILEVARLKDSTPTSLLEAESHLSPENPWEDDIKMCVQ
ERQCPKMITKNSSPPNGTISRKEKDDTVLSEESVQAMKRGKTVISRSTSPTFSKQAKRVS
WPSFHSSGQYCTGKILTAAPELRTSEDCTSSTSTIKIEKMESRPVLPLTDKCESSSLTVN
ISLEPCPQSEIIVAPIKTDFALTEKDHPKRLLCCEKTLNPDTEMSFVSEETKLSTSNRSF
ETEAEDESVYFTPELYDPIDIDEKKNEPVETDGISTLADNSNYILAEDVFEDETMKGEDS
VSKMKAEDCSDTKLNRIIHIEESKIDKH
NT seq
3507 nt
NT seq
+upstream
nt +downstream
nt
atgatgtcttcagtatggtctgaatatacaattggtggggtgaagattaactttccttgt
aaggcttatccatcacagcttgctatgatgaattgtattgtcagaggattaaacagtaag
caacattgtttgttggagagccccacaggaagtgggaaaagcttagccttactttgttcg
gctttagcatggcagcagtctcttagtgggaagccagtggatgagggcttaagtaaaaag
gctgaagtaccaccatcatgtagttgtacatgccattcaaagaattttcctaacaatgac
attatgaacccaggaacatcacaccattttggtagtccaagtacaccaccttctgaaaga
aatatcacttcatcaacttgtcaagattctcctgaaaaaaacacactggctgcaaagtta
tctgccaagaagcaggcatctgtgtgcagaaatgaaaatgatgattttcaagtagacaag
aaaagaattcgcctcttagaaactacacagcagattagaaaacgtcattcttttgaaaag
gaagtacaccatttggatgcaaaagttgcttcaggaaaggcagtaaaactcaactctcca
tcaggaaccacaaactccttttctctacaaagtccccctggccactgttctaggtgctgt
tgttctcctaaacaaggaaacagtcaagattcttcaaatgccattaagaaggatcatgga
gggaaatcgaagatacccaaaatatattttgggacacgcacacacaagcagattgctcag
attactagagagctccggaggacagcgtactcaggggtcccaatgactattctttctagc
agggatcatacttgtgtccatcctgaagcagttggtaacttcaacagaaaagaaaaatgc
atggaattgctagatgggaaaaatggaaagtcctgctatttttatcatggtgttcataaa
attagagatcaacacacattacagactctccaagggataagggaaactatggatatcaac
ctgaaagaacaggttgtcattttagatgaagctcataatattgaggactgtgctcgggaa
tcagcaagttacagtgtaacagaagttcagctttggtttgctcgagatgaactagatagt
atggtaaacaataacataaggaagaaagaccacgatcccctccgagctgtgtgctatagt
ctcattcactggttagaagcacactctgaacaccttgtagagaggcactatgagtcatcc
tgtaagatatggagtgggaatgagatgatctttcatttacacaaaatgggcatcacttct
gctacttttcccatcttgcagggacatttttctgctgtccttcaaaaagaagaaaaagtc
tcatcagttcatggtaaggaggaagcaagagaaatacctgttatcagtgcttcaactcaa
gtaatgctcaaaggactttttatggtgcttgactatctttttaggcaaaatagcagattt
gcagatgattataaagttgctattcaacagacttactcttggataaatcagactgatact
tcagatagaaacgagttttttgctctaccaaaaaataagaagcgctctcgacagaaaact
gcagttcacgtgctgaatttttggtgcttaaatccagctgtggccttttcagatattgat
gaaaaagttcagacaatcgttttgacatctggaacattatcaccgatgaaatccttttca
tcagaacttggtgttacatttactattcagctggaggctaatcatgtcattaataactca
caggtttgggttggcaccattggatcaggccccacaggtcggaatctctgtgctaccttc
cagcacactgaaacatttgagttccaggatgaagtgggggcacttttgttatctgtgtgc
cagactgtgagccaaggaattttgtgtttcttgccatcttataagttattagaaaaatta
aaagaacgttggcattccactggtctgtggcgtaacctggagttggtgaagacagtcatt
gtagaaccacagggaggagacaaaactgagtttgatgagttactgcaggtatactatgat
gcagtcaaatacagaggagagaaagatggagcgctcctggtagctgtttgtcgtgggaaa
gtgagtgagggtctggatttctcagatgacaatgcccgtgctgtcataacagtaggaatt
ccttttccaaatgtgaaagatctacaggttgaactgaagcgtcagtacaatgaccagcat
tcaaaattgagaggtcttttacctggtcgtcagtggtatgaaattcaagcatacagggcc
ttaaaccaggccctaggtaggtgtattcgacacaaaaatgattggggagctcttattcta
gtggatgatcgcttcagaagtaacccaagtcgctatatatctggactttctaaatgggta
cggcagcagattcagcaccattcaacattcgaaagtgcactggagtccttgactgaattt
tccaaaaagcatttaaaggtcattgatgtatccatacaggacagaaagtctatacaggac
agtgagtgtatacttgaagtggcccgtttgaaggacagcaccccaacctctttattggaa
gcagaaagtcatctgtcaccagaaaatccttgggaagatgatataaaaatgtgtgtccag
gagcgtcagtgtcctaaaatgataactaaaaattcatcaccaccaaatggcaccatctcc
agaaaggagaaagatgatacagtattatcagaagagtctgtccaggcaatgaaaagaggg
aaaacggtgatttcgagatccacaagcccaaccttcagcaaacaagcaaagagagttagt
tggcctagcttccattcttctggacagtattgtactggtaaaatactgactgcagcacct
gagctcaggacttcagaagactgtacctctagcacttctactatcaaaatagaaaagatg
gaaagtagacctgttttgccactcactgataaatgtgaatcctcatctctgacagtaaac
atatcacttgagccatgccctcaatcggaaatcattgttgcaccgataaagactgatttt
gctcttaccgaaaaagatcatcccaaacggctgctctgctgtgaaaaaacactgaatccg
gacactgaaatgtctttcgtaagtgaagaaactaaactttctacttcaaatagatctttt
gagacagaagcagaagatgaatctgtctattttacacctgaactttatgatcctatagat
atagatgaaaagaaaaatgaaccagttgaaactgatggaatcagtacactggctgataat
tcaaattacattttagctgaagacgtttttgaagatgaaactatgaaaggagaggattca
gtcagcaaaatgaaagctgaggattgctcagacacaaaattgaatagaatcatacatatt
gaagaaagtaaaattgataaacattga
DBGET
integrated database retrieval system
