Loxodonta africana (African savanna elephant): 100676673
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Entry
100676673 CDS
T04351
Symbol
CNTN1
Name
(RefSeq) contactin-1
KO
K06759
contactin 1
Organism
lav
Loxodonta africana (African savanna elephant)
Pathway
lav04514
Cell adhesion molecule (CAM) interaction
lav04517
IgSF CAM signaling
Brite
KEGG Orthology (KO) [BR:
lav00001
]
09130 Environmental Information Processing
09133 Signaling molecules and interaction
04514 Cell adhesion molecule (CAM) interaction
100676673 (CNTN1)
04517 IgSF CAM signaling
100676673 (CNTN1)
09180 Brite Hierarchies
09183 Protein families: signaling and cellular processes
04515 Cell adhesion molecules [BR:
lav04515
]
100676673 (CNTN1)
00537 Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
lav00537
]
100676673 (CNTN1)
Cell adhesion molecules [BR:
lav04515
]
Immunoglobulin superfamily
Contactins
100676673 (CNTN1)
Glycosylphosphatidylinositol (GPI)-anchored proteins [BR:
lav00537
]
Others
100676673 (CNTN1)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Ig_3
I-set
ig
Ig_2
fn3
V-set
FN3_DSCAM-DSCAML_C
Ig_5
Pur_ac_phosph_N
Sp38
Motif
Other DBs
NCBI-GeneID:
100676673
NCBI-ProteinID:
XP_023411114
LinkDB
All DBs
Position
Unknown
AA seq
1017 aa
AA seq
DB search
MSLTFIEHKMKMWLLVSHLLMISFTACLAEFTWHRRYYGHGVSEEDKGFGPIFEEQPVNT
VYPEESPEGKVSLNCRARASPFPVYKWRMNNGDIDLTSDRYSMVGGNLVINNPDKQQDAG
IYYCLASNNYGMVRSIEATLSFGYLDPFPPEERPEVRVKEGKGMVLLCDPPYHYPDDLSY
RWLLNEFPVFITMDKRRFVSQTNGNLYIANVEASDKGNYSCFVSSPSITKSVFSKFIPLI
PLPERTTKPYPADIVVQFKDVYALMGQNVTIECFALGNPVPDIRWRKVLEPMPSTAEIST
SGAVLKIFNIQLEDEGTYECEAENIKGKDKHKARIYVQAYPEWVEHINDTEVDIGSDLYW
PCVATGKPIPTIRWLKNGYAYHKGELRLYDVTFENAGMYQCIAENTHGAIYANAELKILA
LAPTFEMNPMKKKILAAKGGRVIIECKPKAAPKPKFSWSKGTEWLVNSSKVLIWEDGSLE
INNITRNDGGIYTCFAENNRGKANSTGTLVITNPTRIILAPINADITVGENATMQCAAAA
DPALDLTFVWSFNGYVIDFNKENTHYQRNFMLDSNGELLIRNAQLKHAGRYTCTAQTIVD
NSSASADLVVRGPPGPPGGLRIEDVRATSAALTWSRGSDNHSPISKYTIQTKTILSDDWK
DAKTDPPIIEGNMEAARAVDLIPWMEYEFRVVATNTLGIGEPSIPSNKIKTDGAAPNVAP
SDVGGGGGSNRELTITWAPLSREYHYGNNFGYIVAFKPFDGEEWKKVTVTNPDIGRYVHK
DETMRPSTAFQVKVKAFNNKGDGPYSLTAVINSAQDAPSEAPTEVGIKVLSSSEMSVHWE
HVVEKVVEGYQIRYWAAHDKEAAAHRVQVSSQEYSARLENLVPDTQYFVEVRACNSAGCG
PPSDVTETFTRKAPPSQPPRIISSIRSGSRYIITWDHVVALSNESTVTGYKVLYRPDGQH
DGKLYSTHKHSIEVPIPRDGEYVVEVRAHSDGGDGVVSQVKISGKPVISDTFQLRYL
NT seq
3054 nt
NT seq
+upstream
nt +downstream
nt
atgagcttaacctttattgaacacaagatgaaaatgtggttgctggtcagtcaccttctg
atgatatcctttacagcctgtctagcagagtttacatggcacagaaggtattatggtcat
ggagtttctgaggaagacaaaggatttggaccaatttttgaagagcaacccgtcaatacc
gtctatccagaggaatcaccggaaggaaaagtttcactaaactgcagggcacgagccagc
cctttcccagtttacaaatggagaatgaataatggggatattgacctgacaagtgaccgg
tacagtatggtgggaggaaaccttgtcatcaacaaccctgacaagcagcaagatgctgga
atatactactgtttagcatcaaataactatgggatggtcagaagcattgaagcaacctta
agctttggatatcttgatcctttcccccctgaggaacgtcctgaggtcagagttaaagaa
ggaaaaggaatggtgctcctctgtgatcctccatatcattatccagatgatcttagctac
cgctggcttctaaatgaatttcctgtatttatcacaatggataaacgaagatttgtgtcg
cagaccaatggcaatctctacattgcaaatgtggaggcatctgacaaaggaaattattca
tgctttgtatccagtccttctattacgaagagtgtgttcagcaagtttataccactcatt
ccactacctgaacgaacaacaaagccatatcctgctgatattgtagttcagttcaaggac
gtatatgcactgatgggccaaaatgtgactatagagtgttttgctcttggaaatcctgtt
cctgatatccggtggcggaaggtcctagaaccaatgccaagcaccgctgagatcagcact
tccggggctgtcctcaagatcttcaacatacagttggaagatgaaggcacatatgaatgt
gaagccgagaacatcaaaggaaaggataaacacaaggcaagaatttatgttcaagcatat
cctgagtgggtagaacatatcaatgacacagaggtggatataggcagtgatctctactgg
ccttgtgtggccacaggcaagcccatccctacaatcagatggctgaaaaatggatatgcg
tatcataaaggagaattgagactatatgatgtgacttttgaaaatgctggaatgtaccag
tgcatagctgaaaacacacatggagccatttatgcaaatgctgagctgaaaatcttggct
ttggctccaacttttgaaatgaatcctatgaagaaaaagatcttggctgctaaaggagga
agggttataattgaatgcaaacctaaagctgcacctaaaccaaaattttcatggagtaaa
gggactgagtggcttgtcaacagtagcaaagtactcatttgggaagatggtagcttggaa
atcaataacattacaaggaatgatggaggtatctacacatgctttgcagaaaataatcga
gggaaagctaatagcactgggactcttgttatcacaaatcccacacgaattatattggct
ccaattaacgctgatatcactgttggagaaaatgccaccatgcagtgtgctgctgcggcc
gatcctgccctggatctcacatttgtttggtccttcaatggctatgtgatcgattttaac
aaagagaatactcattaccagcggaattttatgctagattccaatggggaactgctcatc
cgaaacgcccagctgaaacatgctggaagatacacttgcaccgcccagacaattgtggac
aattcttcagcttcagctgacctcgttgtgcgaggccctccaggccctccaggtggcctg
agaatagaagatgttagagccacctctgcggcacttacttggagccgtggttcagacaat
catagccctatctcgaaatacactatccagaccaagactattctctcagatgactggaaa
gatgcaaagacagatcctccaattattgaaggaaacatggaggcagcaagagcagtggat
ttaatcccgtggatggagtatgaatttcgtgtggtagcaaccaatactttgggtatagga
gagcccagtataccatcgaacaaaattaaaacggatggtgctgcacctaatgtggctcct
tcggatgtaggagggggcggtggaagcaatagagaactgactataacgtgggcacctttg
tcaagagaataccattatggcaacaattttggttacatagtggcatttaagccatttgat
ggggaagaatggaaaaaagttacagttactaatccagatattggtcgatatgtccataaa
gatgagaccatgcgcccatccactgcgtttcaagtgaaagttaaggccttcaacaacaaa
ggcgatggaccgtacagccttacagcagtcattaactcagcacaagatgctcccagtgaa
gcacctacagaagtaggcataaaagtcttatcatcttctgagatgtctgttcattgggag
catgttgtagaaaaagtagtggaaggctatcagattcgttactgggctgcccatgacaaa
gaagcagctgcacacagagttcaagtctccagccaagagtactcagccaggctagagaac
ctggtgccagacacccagtactttgtggaagtcagggcctgcaacagtgcagggtgtggt
ccacccagtgacgtgactgaaactttcaccaggaaagcacctcctagccagcctccaaga
atcatcagttcaataaggtctggttcacgctacataatcacctgggatcatgtcgttgca
ctatcaaatgaatcaacagtgacaggatataaggtactctatagacctgatggccaacat
gatggcaagctgtattcaactcacaaacactcgatagaagtcccaatacccagggatgga
gagtatgttgtagaggttcgtgcacacagtgatggaggagatggagtggtgtcacaagtc
aaaatttcaggtaagccagtcatttcagacacatttcagttaaggtacttataa
DBGET
integrated database retrieval system
