KEGG   Lactobacillus sp. wkB8: LACWKB8_0653
Entry
LACWKB8_0653      CDS       T03355                                 
Name
(GenBank) Hydrolase (HAD superfamily)
  KO
K18682  ribonucrease Y [EC:3.1.-.-]
Organism
law  Lactobacillus sp. wkB8
Pathway
law03018  RNA degradation
Brite
KEGG Orthology (KO) [BR:law00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   03018 RNA degradation
    LACWKB8_0653
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:law03019]
    LACWKB8_0653
Messenger RNA biogenesis [BR:law03019]
 Prokaryotic type
  Bacterial mRNA degradation factors
   RNA degradosome components
    Ribonucreases
     LACWKB8_0653
SSDB
Motif
Pfam: RNase_Y_N HD KH_1 HDOD KH_PNO1_2nd KH_KhpA-B KH_2 ZapG-like KH_NusA_2nd V_ATPase_I
Other DBs
NCBI-ProteinID: AIS08927
LinkDB
Position
632525..634156
AA seq 543 aa
MTSKFLIPVAIAIISIILGIVIGYVIRKSAWEKKARNAQNDADHILSEAKARVDAAKAEV
NAQKQAADAIKQSAQNTKKEKILEAQEQIQDYRQKVEDELNDKRDTIARDQNRLTQREDT
LDHKNSLLKEKEDDLAKKDEQLEKKQTELTTKLQKADELVEQTTQKLYEVAHLDKEQAKK
LVLNQLADELVKERAEMISNSNEEVKAKADHYARKIIIDAIQSSSADTVAETTVSVVDLP
NEEMKGRIIGREGRNIRSFEALTGVDLIIDDTPKVVTLSGFDAIRREIAKRAMERLIKDG
RIHPARIEETVDKARKEVNDDIYEAGESALMELGIHKMNPELVKILGRLKYRTSYGQNVL
GHSIEVAKLAGTMAAELGLNEKLAVRAGLLHDIGKAVDHDIEGSHVEIGVELTRKYHEPD
VVVNAIAAHHGDVPKLSFIAELVVAADTISSARPGARSESLENYIRRLTDLEQIANRYDG
VKQAYAIQAGREVRVMVEPDKISDDRITVLARDIRNQIEKELDYPGNIKITVIREKRAVS
IAK
NT seq 1632 nt   +upstreamnt  +downstreamnt
atgacaagtaaatttttgattcccgtcgcgattgctattatttcaattatattaggcata
gttattggttatgttatccgtaaaagtgcttgggagaaaaaagctcggaacgcccaaaac
gatgccgatcatattttaagcgaagctaaagcacgagttgatgctgcaaaagctgaagtc
aatgcacagaagcaagcggctgatgctataaaacaaagtgcacaaaacacaaagaaagaa
aagattcttgaagcgcaagagcaaattcaggattaccgacaaaaagttgaagatgaatta
aacgataagcgtgatacgattgcgcgtgatcaaaatcgtttaacacaaagagaggatact
ctcgatcataagaactctttgctaaaagaaaaagaggacgatttagctaaaaaagacgaa
cagctagaaaaaaagcaaactgaattaaccactaaattacaaaaagctgatgaattagtt
gaacagactacgcaaaagctttatgaagtagcccatttagacaaggaacaggctaaaaag
ctggttctaaatcaattagcagatgagctagttaaagagcgggctgaaatgattagcaac
agcaatgaagaagtaaaagcaaaggctgatcattatgctcgtaaaataattattgatgct
attcaaagcagctcggctgatacagtggctgaaaccacagtatcagtggtagatttacct
aatgaagaaatgaagggtcgaattattggtcgtgaaggacgcaatattagatcatttgaa
gcactcacaggagtagatttaataattgatgatactcctaaagttgtaactctaagcggt
tttgatgcgattaggcgtgaaattgctaaaagggcaatggaacgcctgattaaagacgga
cgaattcatccggctagaattgaagagacagttgataaggctcgtaaagaagttaatgat
gacatttacgaagcgggcgaaagcgctctaatggagttagggattcataaaatgaatcct
gagttggttaaaatattgggtaggctcaaataccggacatcttatggtcaaaatgtattg
ggacactcaattgaagttgcaaagttagctggaacaatggctgcggagcttggattaaat
gaaaaattagcggttcgcgcgggattattacacgatattggaaaagcagtcgaccatgat
attgaaggttcacacgtagaaataggtgtggaattgacaagaaaatatcatgagccggat
gtggttgttaatgcaattgcggcgcatcacggggatgtgcctaagttatcatttattgct
gaattggtagtggcagcagatacgatttcttctgcaagacctggtgccagaagtgaaagt
ttggagaattacattagaagactgactgaccttgagcaaatagcaaataggtatgatgga
gttaaacaggcatacgctattcaagctgggcgagaagtacgggtgatggttgaacccgat
aagatttcagacgatcgcattacagttttagcacgtgatattcgtaatcagattgaaaaa
gaacttgattacccaggtaatattaaaataacagttattcgtgaaaaacgtgctgtatca
attgcaaaataa

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