Lactobacillus amylovorus GRL1118: LAB52_00025
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Entry
LAB52_00025 CDS
T01954
Symbol
gyrB
Name
(GenBank) DNA gyrase subunit B
KO
K02470
DNA gyrase subunit B [EC:
5.6.2.2
]
Organism
lay
Lactobacillus amylovorus GRL1118
Brite
KEGG Orthology (KO) [BR:
lay00001
]
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lay03032
]
LAB52_00025 (gyrB)
03400 DNA repair and recombination proteins [BR:
lay03400
]
LAB52_00025 (gyrB)
Enzymes [BR:
lay01000
]
5. Isomerases
5.6 Isomerases altering macromolecular conformation
5.6.2 Enzymes altering nucleic acid conformation
5.6.2.2 DNA topoisomerase (ATP-hydrolysing)
LAB52_00025 (gyrB)
DNA replication proteins [BR:
lay03032
]
Prokaryotic type
DNA Topoisomerases
LAB52_00025 (gyrB)
DNA repair and recombination proteins [BR:
lay03400
]
Prokaryotic type
DSBR (double strand breaks repair)
NHEJ (non-homologous end-joining)
SHIIR (short-homology-independent illegitimate recombination)
Facilitator
LAB52_00025 (gyrB)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_gyraseB
DNA_gyraseB_C
Toprim
HATPase_c
HATPase_c_3
Motif
Other DBs
NCBI-ProteinID:
AEA31001
LinkDB
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Position
4303..6267
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AA seq
654 aa
AA seq
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MADKSKENLDKVKKYEKEADKYNASQIQVLGGLEAVRKRPGMYIGSTSSQGLHHLVWEII
DNSIDERLAGFATKIEVTINEDGSVTVQDDGRGIPVDIQEKTGRPALETVFTVLHAGGKF
GGGGYKVSGGLHGVGASVVNALSTKLDVTVMRDGKKYFIDFDHGRVKDEMKQIGTVPLSE
HGTIVHFYPDPDIFTETTVFDDKILKNRIRELAFLNKGLTLTFTDKRKDSAETDVYKFEG
GIKEYVAFLNKDQEVLFDDPIYVESTYNGIDVEVALQYTNGYKTTLMTFANNIHTYEGGM
HEAGFKTALTRVVNDYAHKAKILKDKDDNLSGEDIREGMTAVVSVKHPNPQFEGQTKTKL
GNSDARTAVDKSFSETFSRFLMENPSVGRKIVEKGQLAERARTAAKRAREVTRKKSGLEI
ANLPGKLADNTSNDPSISELFIVEGNSAGGSAKQGRSRLTQAILPIRGKILNVEKASMDR
ILANQEIRSLFTALGTGFGADFDVSKARYHKLIIMTDADVDGAHIRTLLLTLFYNYMRPM
IDKGYVYIARPPLYQVRQGKVVKYLDTDEELHDYLGSLQPSPKPVVQRYKGLGEMDPEQL
WETTMNPENRRLDRVSPEYAKDADAVFELLMGNEVAPRRSFIEKNAKYVENLDA
NT seq
1965 nt
NT seq
+upstream
nt +downstream
nt
atggctgataaatcaaaagaaaatcttgataaggtcaaaaaatatgaaaaagaggccgac
aagtataatgccagtcaaatccaagtcttaggtggtcttgaggctgtccgcaagcgtcct
ggtatgtatatcggttcgactagttctcaaggattgcaccatttagtgtgggaaattatt
gataacagtattgacgaacgacttgctggttttgccaccaagatcgaggttactatcaac
gaagatggcagcgttactgttcaagatgatggtcgtggtattcctgtggatatccaagaa
aaaactggtcgtccagcacttgaaactgtcttcactgttcttcacgccggcggtaaattt
ggcggtggcggatataaagtttcaggtggtttgcacggtgtaggtgcttcagttgttaac
gccttatccacaaagcttgatgttactgttatgcgtgatggcaagaagtacttcattgac
tttgatcacggtcgtgtaaaggatgagatgaaacaaatcggtacggttccacttagtgaa
cacggtactatcgttcacttttacccagatcctgatatctttaccgaaactaccgtcttt
gacgacaagattttaaagaacagaattcgtgaattagcctttttgaacaagggattaaca
cttacctttactgataagcgtaaagatagtgcagaaaccgatgtttacaagtttgaaggt
ggtatcaaagaatacgttgcctttttgaacaaggaccaagaagtattgtttgatgatcct
atctatgtggaaagcacttataacggtatcgacgttgaagtagctttgcaatatacaaat
ggctataagacaacgttaatgacctttgctaacaacattcacacctatgaaggtgggatg
cacgaagctggatttaagaccgctttaacgcgtgtggttaacgactatgcccacaaggct
aagatcttaaaggacaaagacgataatctttctggtgaagatattcgtgaagggatgact
gcagttgtttcagttaagcaccctaatccacaattcgaaggtcagactaagaccaagctg
ggtaactcagatgctagaactgctgttgacaagtcattctctgaaacctttagccgcttt
ttaatggaaaacccatcagttgggcgtaagattgtggaaaaaggtcaattagcagaacgt
gctagaactgctgctaagcgtgcgcgtgaagtaacgcgtaaaaagtctggtttggaaatt
gccaacttgccaggtaagctggctgacaacaccagtaatgatccaagcatttcagaattg
ttcatcgtcgaaggtaactcagccggtggttccgcaaagcaaggtagatctcgtttgact
caagctattttgccaatcagaggtaagatcttgaatgtggaaaaagcttcaatggatcga
attttggctaaccaagaaattagatctttattcacagctttaggcacaggcttcggcgca
gacttcgatgtttcaaaggcacgttatcacaagttgattatcatgactgatgccgatgtc
gatggtgcccacattagaactcttcttttaacactgttctacaactacatgcgtccaatg
atcgacaagggatatgtttatatcgctcgtccacctctgtaccaagttcgtcaaggcaag
gttgttaaatatcttgatactgacgaagaattgcacgactacttaggcagcttgcaacca
agtccaaagccagtagttcaacgttacaaggggttaggtgaaatggacccagaacaactt
tgggaaacaaccatgaatcctgaaaacagacgattagatcgtgtaagtcctgaatatgct
aaagatgccgatgcggtctttgaacttttgatgggtaatgaagttgcacctagacgtagc
tttattgaaaagaacgccaagtatgtagaaaacctagatgcgtag
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