KEGG   Lycium barbarum (goji berry): 132617807
Entry
132617807         CDS       T09483                                 
Name
(RefSeq) E3 ubiquitin-protein ligase RMA1H1-like
  KO
K10666  E3 ubiquitin-protein ligase RNF5/185 [EC:2.3.2.27]
Organism
lbb  Lycium barbarum (goji berry)
Pathway
lbb04141  Protein processing in endoplasmic reticulum
Brite
KEGG Orthology (KO) [BR:lbb00001]
 09120 Genetic Information Processing
  09123 Folding, sorting and degradation
   04141 Protein processing in endoplasmic reticulum
    132617807
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   04121 Ubiquitin system [BR:lbb04121]
    132617807
Enzymes [BR:lbb01000]
 2. Transferases
  2.3  Acyltransferases
   2.3.2  Aminoacyltransferases
    2.3.2.27  RING-type E3 ubiquitin transferase
     132617807
Ubiquitin system [BR:lbb04121]
 Ubiquitin ligases (E3)
  Single Ring-finger type E3
   Other single Ring-finger type E3
    132617807
SSDB
Motif
Pfam: zf-C3HC4 zf-C3HC4_2 zf-RING_UBOX zf-RING_2 RING_XB3-XBAT31 zf-C3HC4_3 zf-RING_5 zf-C3HC4_4 Prok-RING_4 zf-ANAPC11 zf-rbx1
Other DBs
NCBI-GeneID: 132617807
NCBI-ProteinID: XP_060188864
LinkDB
Position
11:complement(6084940..6086772)
AA seq 247 aa
MALEHNFVGEDIFSFVSEEDVSLKKKSAVPVPTSSSDSITGGYDCNICLDSAHEPVVTLC
GHLYCWPCIYKWLQVESSTPGSEENCKCPVCKAHISNSSLVPLYGRGTSSTESESKKSQL
DVVVPRRPQAIGITTLVNSSSPTSHVSQQLHHRRSFPSAFGTYAALAPSSFGGTPGISLS
SPTVGVFGEMFLARMFGNSDTSLFPYPHPSTYAVPGSGSSRMRQVEKSLNRLSIFLFCCI
ILCLLLF
NT seq 744 nt   +upstreamnt  +downstreamnt
atggctttggaacacaattttgttggtgaagatatattcagttttgtatctgaagaagat
gtttcccttaagaagaaaagtgcagttccagttccaacatcaagttctgacagtataaca
ggaggttatgattgtaatatatgtctcgactcagcacatgagcctgtagtcaccctctgc
ggtcacctctactgctggccttgcatttacaagtggctccaggttgagagctctactccg
ggatcagaagagaactgtaaatgtccagtctgtaaggctcacatctcaaactcatcgctg
gtacctctctatggccgtggaacatcatcaacagaatctgaatccaagaagtctcaactg
gatgttgtagtaccgcgcaggcctcaagccattgggataacaactctggttaattcatcg
tctccaacttctcacgtgagtcagcaacttcatcacaggcgatctttcccctctgccttt
ggtacctatgctgctttggctccatccagcttcgggggtactccagggatcagtttatcc
agcccgacagttggtgtatttggagaaatgtttttggcaaggatgttcgggaactcagac
acgagtttatttccttatcctcatccaagcacgtacgccgttccaggaagtggcagttca
agaatgaggcaggtggaaaagtctcttaacagattatccatctttcttttctgctgcatc
atcctatgccttctgctattctga

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