Lycium barbarum (goji berry): 132632030
Help
Entry
132632030 CDS
T09483
Name
(RefSeq) transcription factor SPEECHLESS
KO
K20558
transcription factor SPEECHLESS
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb04016
MAPK signaling pathway - plant
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09130 Environmental Information Processing
09132 Signal transduction
04016 MAPK signaling pathway - plant
132632030
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03000 Transcription factors [BR:
lbb03000
]
132632030
Transcription factors [BR:
lbb03000
]
Eukaryotic type
Basic helix-loop-helix (bHLH)
HLH domain only
132632030
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
HLH
bHLH-TF_ACT-like_plant
Motif
Other DBs
NCBI-GeneID:
132632030
NCBI-ProteinID:
XP_060203799
LinkDB
All DBs
Position
3:118782692..118786226
Genome browser
AA seq
346 aa
AA seq
DB search
MDGDQSLSDFFEDSECDIFSILEALEGPTTTTTTTTTSDEINGLVSEEGKKRKLISQKST
GSSGTLQEYYLEETEADTPSSKRQKVAGVTSGIEDNQQENRISHITVERNRRKQMNEHLS
VLRSLMPCFYAKRGDQASIIGGVVDYINELQQVLQSLEAKKQRKVYSEVLSPRLVPSPRV
VPSPLSPRKPPLSPRMNLPISPRTPQPTSPYKPNHNRNNNPNNNANRLHVPAIIASPLEP
SPPSTSSNSSIDSHVNNELAANSKSAIADVEVKFSGANVILKTVSPRIPGQAVKIVAALE
ELALEILHVSISTIDGTMLNSFTIKVGIECQLSAEELAHQIQQTFC
NT seq
1041 nt
NT seq
+upstream
nt +downstream
nt
atggacggtgatcaaagtttgtctgatttttttgaggattctgaatgtgacatcttcagt
attttagaggctttggaaggcccgacaacaacaacaacaaccacaacaacttcggatgaa
attaatggtttagtttcggaagaagggaagaaaaggaagttgatctctcagaaatctact
ggttcgagtggaactttacaagagtactatttggaggagactgaagcagatacaccaagt
agcaagagacaaaaagtagcgggggttacgagtgggatagaggataaccagcaagaaaat
aggatttctcacataactgttgaaaggaaccgcaggaagcaaatgaatgaacatctctct
gtgcttcgctctttgatgccttgtttttatgctaaacgaggtgatcaagcatcaataatt
ggtggggttgtggattacataaacgagcttcaacaagttctccaatcactcgaagccaag
aagcaacgcaaagtttacagtgaagttctaagcccaagattagtcccaagtccaagagta
gtaccctcaccattaagtccaagaaaacccccacttagccccagaatgaacttaccaatt
agtccaagaaccccacagcccaccagcccatataagcctaatcataatcgtaataataat
cctaataataatgctaacaggctacatgttccagccataattgctagcccacttgaacca
tctcctcctagtacttcttcaaattcgtccattgacagtcatgtcaataatgagctggct
gccaactcaaaatcagccattgctgacgtggaggtgaaattctccggcgcgaatgtcata
ttgaagactgtgtctccacgtattccgggccaagctgtgaagatcgttgctgcgttagag
gaactcgcccttgaaatactccatgtcagcatcagtactattgatggaaccatgctcaac
tccttcaccatcaaggtcggaattgaatgccaacttagtgctgaggaactggctcatcag
attcagcagacattctgctaa
DBGET
integrated database retrieval system
