Lycium barbarum (goji berry): 132645972
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Entry
132645972 CDS
T09483
Name
(RefSeq) serine/arginine-rich splicing factor SR30-like
KO
K12890
serine/arginine-rich splicing factor 1
Organism
lbb
Lycium barbarum (goji berry)
Pathway
lbb03040
Spliceosome
Brite
KEGG Orthology (KO) [BR:
lbb00001
]
09120 Genetic Information Processing
09121 Transcription
03040 Spliceosome
132645972
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03041 Spliceosome [BR:
lbb03041
]
132645972
Spliceosome [BR:
lbb03041
]
Common components
Common spliceosomal components
SR proteins
132645972
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
RRM_1
RRM_occluded
RRM_7
Nup35_RRM_2
Motif
Other DBs
NCBI-GeneID:
132645972
NCBI-ProteinID:
XP_060219252
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All DBs
Position
6:complement(120757901..120767280)
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AA seq
285 aa
AA seq
DB search
MGRLSRTIYVGNLPGDIREREVEDLFYKYGPIVEIDLKVPPRPPGYAFVEFEDERDADDA
IRGRDGYDFDGHRLRVELAHGGRGSSSSSYYDRHSSYSSGSRGGLSRRSDYRVLVSGLPS
SASWQDLKDHMRRAGDVCFSQVFRDRDGMRGIVDYTNYDDMKYAIKKLDDSLFRNQFSRA
YIRVDKYDKRRSYSRSPSPYYSRGRSYSRSRSPRRSYSSQSRSVSPRGRYSRRSVSVSPS
RSFSPARSISRSLSRSRSPLSPPPRRRNTRSRSRSLSYSRSSESY
NT seq
858 nt
NT seq
+upstream
nt +downstream
nt
atgggtcgtctaagtcgcactatctacgtcggaaatcttcctggtgatattcgggagaga
gaagtagaagatttgttttacaagtatgggcccattgtggaaattgatttgaaagttcct
cctagaccacctggttatgcgtttgttgagtttgaagatgaacgtgatgctgatgatgcc
atccgtggccgtgatggctatgactttgacggacatcgtttgcgagttgaacttgcacac
ggtgggcgaggatcatcatcgtcatcatattatgatcgccacagcagttacagtagtggg
agtcgtggtggactttctcggcgctcagactatcgtgttctggtctctggactaccatct
tctgcttcatggcaggatttgaaggatcacatgcgacgagctggagatgtctgtttctct
caagttttccgagatcgtgacggtatgagagggattgtggactataccaactatgatgat
atgaaatatgcgataaagaaacttgatgactccctgttccgcaatcaattctctcgagca
tatattagggtggacaagtatgataagaggcgtagctattccaggagtccaagtccatat
tattcaagaggcagaagttactcaagaagcaggagtcctcggcgaagctatagcagccag
agcagaagtgtgtctcctaggggaagatattctcgtcgctctgtgtctgtctcgccctca
aggtctttttcccctgctcgctctatttcaagatctctatcaagatccagatctccactt
tcacctccacctcgccggaggaacacaaggagccgtagcaggagtctgtcctattctcgt
tcttcggagtcctactga
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