Laccaria bicolor: LACBIDRAFT_229498
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Entry
LACBIDRAFT_229498 CDS
T01044
Name
(RefSeq) hypothetical protein
KO
K10756
replication factor C subunit 3/5
Organism
lbc
Laccaria bicolor
Pathway
lbc03030
DNA replication
lbc03410
Base excision repair
lbc03420
Nucleotide excision repair
lbc03430
Mismatch repair
Brite
KEGG Orthology (KO) [BR:
lbc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LACBIDRAFT_229498
03410 Base excision repair
LACBIDRAFT_229498
03420 Nucleotide excision repair
LACBIDRAFT_229498
03430 Mismatch repair
LACBIDRAFT_229498
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lbc03032
]
LACBIDRAFT_229498
03036 Chromosome and associated proteins [BR:
lbc03036
]
LACBIDRAFT_229498
03400 DNA repair and recombination proteins [BR:
lbc03400
]
LACBIDRAFT_229498
DNA replication proteins [BR:
lbc03032
]
Eukaryotic type
DNA Replication Elongation Factors
RFC (replication factor C)
LACBIDRAFT_229498
DNA Replication Termination Factors
ELG1-RFC complex
LACBIDRAFT_229498
Chromosome and associated proteins [BR:
lbc03036
]
Eukaryotic type
Sister chromatid cohesion proteins
CTF18-RFC complex
LACBIDRAFT_229498
DNA repair and recombination proteins [BR:
lbc03400
]
Eukaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
RFC (replication factor C)
LACBIDRAFT_229498
Check point factors
HRAD17(Rad24)-RFC complex
LACBIDRAFT_229498
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
Rep_fac_C
AAA
DNA_pol3_delta2
Rad17
DUF815
AAA_30
AAA_14
AAA_11
AAA_assoc_2
ResIII
DNA_pol3_delta
RuvB_N
AAA_22
DEAD
AAA_3
AAA_5
AAA_19
AAA_16
AAA_24
ATPase_2
T2SSE
AAA_7
Viral_helicase1
MCM
AAA_28
TniB
nSTAND3
bpMoxR
PIF1
Mg_chelatase
SLFN-g3_helicase
AAA_18
AAA_33
AAA_25
Motif
Other DBs
NCBI-GeneID:
6070816
NCBI-ProteinID:
XP_001875137
JGI:
229498
UniProt:
B0CTY3
LinkDB
All DBs
AA seq
334 aa
AA seq
DB search
MVSAHTYSHGNIQRSFRVEKYRPVTLDDVVSHKDITNTIERFIEKNRLPHLLFYGPPGTG
KTSTILAVARRIYGAQYRKQILELNASDERGIDVVREQVKQFAETRTLFAKGFKLIILDE
ADMMTQQAQAALRRVIEQYTKNVRFCIICNYVNKITPAIQSRCTRFRFSPLPAIEVEKRV
KTVVEAEQVSLTDDGKKALLKLSRGDMRRALNVLQACHAAYDTIGETEIYNCTGNPHPSD
IEAIVNSMLADEFTASYQMTSKMKTERGLALQDLLTGAYEYLETIDIKPHARIYLLDHLA
TTEHRLSTGGSEKMQLTALLGAFKIAIELSTKSA
NT seq
1005 nt
NT seq
+upstream
nt +downstream
nt
atggtgagtgcccacacttacagtcatggtaatattcaacgctcttttagggtggagaag
tacaggcctgtgacactggacgatgtcgtatcgcataaagacatcacaaacacgatcgaa
cgatttatcgagaagaataggctaccgcatctgctgttttacggacccccgggaacaggg
aaaacatcaacgatcctagcggtggcgaggcgcatctatggggcacagtaccgtaaacag
attctggagttgaacgcgtctgatgaacgtggaattgatgttgtccgcgaacaagtgaaa
cagtttgcagaaacacgcacattattcgccaaaggcttcaagctcatcattctcgacgaa
gccgacatgatgacgcagcaagctcaggccgctcttcgtcgcgtcattgaacaatatacc
aagaatgtccgcttttgcataatttgcaactacgtaaacaagattacaccagctattcaa
agtcgctgcacgcgcttcaggttctcgcctcttccggccattgaagttgagaagcgggta
aagactgttgtggaagctgagcaggtgtcattaaccgacgatgggaagaaggctttactc
aaactgtctcgcggtgacatgagacgagcactcaacgttcttcaagcatgtcatgctgcg
tatgataccattggagaaaccgagatttacaattgtactggtaatcctcacccctcagat
attgaagccatcgtcaattcaatgttggcggatgaattcactgcgtcataccagatgaca
tccaagatgaaaactgaaagggggcttgctttacaagatctcctgactggcgcatacgaa
tacctggaaaccattgatataaaacctcacgctagaatatacctgcttgatcatctagcc
accacagagcaccgcctttcgacgggcggtagcgaaaaaatgcaattgacagcattgttg
ggcgctttcaaaatcgccatcgaattatcaacaaaatctgcctga
DBGET
integrated database retrieval system