Laccaria bicolor: LACBIDRAFT_229662
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Entry
LACBIDRAFT_229662 CDS
T01044
Symbol
CHR16206
Name
(RefSeq) DNA repair protein, SNF2 family
KO
K10875
DNA repair and recombination protein RAD54 and RAD54-like protein [EC:5.6.2.-]
Organism
lbc
Laccaria bicolor
Pathway
lbc03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lbc00001
]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LACBIDRAFT_229662 (CHR16206)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:
lbc03400
]
LACBIDRAFT_229662 (CHR16206)
DNA repair and recombination proteins [BR:
lbc03400
]
Eukaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
Rad54 family proteins
LACBIDRAFT_229662 (CHR16206)
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
SNF2-rel_dom
Rad54_N
Helicase_C
ResIII
HDA2-3
Motif
Other DBs
NCBI-GeneID:
6071074
NCBI-ProteinID:
XP_001874891
JGI:
229662
UniProt:
B0CSM1
LinkDB
All DBs
AA seq
816 aa
AA seq
DB search
MLRRVPTTSDGKVLDRFHETTRVNQPFKPPTIAILERVQPQRKRKRVSYKGQEASLSDSE
NDAGSRKKKKTDKDGIYHNEEELLAAIPKFPIYKPKPFDQMTRRFSMPSMRSKDGTVVPL
TPSNASLGVRPQAKIIPRPLHDPMEDHAIVLYDPTTDDRETDEERKERLEGEAKEKAAME
AIEKTAGMYNPHKRLEDLLGEGKDKKPKDKKVPVVIDPLLTKVLRPHQVEGVKFLYKCTT
GMLVENQYGCIMADEMGLGKTLQCIALLWTLLKQSPHPGKPSIEKCIIACPSSLVKNWAN
ELVKWLGKDAVTPLAIDGKGGKAELLERVGRWVAARGRNVTQPVMIVSYETLRTLTVHLA
HCKIGLLLCDEGHRLKNSESLTFQALNGLDVNRRVILTGTPIQNDLSEYFSLLNFANPNF
LGSKNDFRKNFENAIIRGRDSLASDGVKAESEKKLKELGNLVTKFIIRRTNDLLSKYLPV
KYEQVVFCGLSEFQLSLYRLFIVSPEIKALLRGTTSQPLKAINILKKLCNHPELLDLPDD
LKGCDHLIPEGFSSTAARSRGKGGKQTVRCDWGGKFLVLERFLHQIKTQTTDKIVLISNY
TQTLDLFEKLCRSKKYGFFRLDGSMTIVKRQKLVDQFNDPDGKEFIFLLSSKAGGCGINL
IGANRLILFDPDWNPAADQQALARVWRDGQKKECFVYRFISTGTIEEKIFQRQANKQALS
SAVVDEKEDAERHFSIDALRQLFTFNENTLCETHETFKCKRCKDGKQIVKAPALLYGDAS
TWNHFTNAELKNNHDDLLRAEVGLPEVSFVFQYISH
NT seq
2451 nt
NT seq
+upstream
nt +downstream
nt
atgcttcgtcgcgtccccaccaccagtgacggaaaagttcttgatagattccatgaaact
actcgagtcaatcagccgttcaaaccacccaccatcgcaatacttgagcgcgttcaacca
caaagaaaacggaagcgtgtctcgtataaggggcaggaagcgagcttatctgattccgaa
aatgacgcaggttcaaggaagaagaagaaaacagacaaggacggcatatatcacaatgag
gaggagctcttggctgccatccccaagtttcctatctacaagcccaaacccttcgaccag
atgacgcgtaggttctctatgccttcgatgagaagcaaagatggaacggtggtaccgctt
acgccatccaatgcgtccctcggcgttcgacctcaggcaaaaatcatcccaagaccgctg
cacgatcccatggaagaccatgccatcgttttatatgacccgactaccgacgatcgagaa
acggacgaagagagaaaggaaaggctcgagggggaagcgaaagagaaagctgcgatggag
gcaatagaaaaaactgccggaatgtacaacccccacaagcgcttggaagatttgctcggc
gaaggaaaggataagaagcccaaagataaaaaggttccagtggtcattgaccctcttttg
acaaaagttcttcggccacatcaggtcgaaggcgtcaagttcctctacaaatgcacaacc
ggcatgctagttgagaatcaatatgggtgcattatggccgacgagatggggcttggaaaa
accttgcaatgcattgcgctgctctggactttgttgaaacaatcaccacatcccgggaag
ccatcaattgagaaatgcattattgcatgtccctcaagcttggtcaagaattgggcaaat
gaacttgtgaagtggttgggaaaagatgcggttacgcccttggccatcgacggcaaagga
gggaaagccgaattgcttgagagggttgggaggtgggtagcagcccgtgggcggaatgta
acgcaaccagtgatgatagtctcatacgagacacttcgtacacttactgtccaccttgca
cattgcaagattggacttcttctctgtgatgaaggtcatagactaaagaattcggagtcc
ttgactttccaagcgctcaacggattagatgtcaatcgtcgcgttattctaacaggcact
ccaatccagaatgatctgtcagaatatttttcgttactgaactttgccaacccaaatttt
cttgggtccaagaacgacttccgcaaaaactttgaaaatgccatcattcgtggccgagat
tcgttggcaagtgatggtgtcaaagcggaaagtgagaaaaaactcaaagagcttggcaat
ttggtcacgaagttcatcattcgcaggaccaatgatctcttgtcaaaatacctccctgtc
aagtacgagcaggttgtcttctgcggtctatcagagttccaactttccctatatcgtctc
tttatcgtgtctcctgagatcaaggctcttctgcgtggcacgacctcccagcccctcaaa
gcgattaatattctcaagaaactctgtaaccaccctgaactactcgaccttcctgatgat
cttaaaggatgtgaccacttgattcccgaaggattcagcagcactgctgcaaggagtcga
gggaagggtggcaagcaaacggttcgatgcgattggggtggcaagtttttggtacttgag
aggtttttgcatcagatcaagacgcaaacgacagataaaatcgtcttgatcagtaattat
acccaaaccctcgaccttttcgaaaagctttgcagaagcaagaaatatggattcttcagg
ctggacgggtcaatgacaatcgtcaaacgacaaaaacttgttgaccaatttaacgacccc
gacgggaaagagttcatcttcttgctcagtagcaaagctggcgggtgtggtatcaacttg
attggcgcgaaccggttaatactatttgatcctgactggaatcctgctgctgatcaacag
gcgctagctcgtgtgtggagggatggccagaaaaaggaatgctttgtttatcgatttatc
tcgacggggactatagaagagaagatattccaacggcaagccaataaacaggccctctca
tctgccgtagtggatgaaaaagaggacgcagagcgccacttttcaattgatgcccttcgg
caactcttcactttcaatgaaaataccctgtgcgaaacacatgagacgttcaagtgcaaa
cgatgcaaagatggcaaacaaatagtcaaagctcctgcgctgctgtacggggatgccagc
acatggaaccacttcaccaatgcggagctcaagaataatcatgacgatcttcttcgtgca
gaagtcgggttgcctgaagtttctttcgtgtttcaatacatcagccactga
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