KEGG   Laccaria bicolor: LACBIDRAFT_245901
Entry
LACBIDRAFT_245901 CDS       T01044                                 
Name
(RefSeq) hypothetical protein
  KO
K02999  DNA-directed RNA polymerase I subunit RPA1 [EC:2.7.7.6]
Organism
lbc  Laccaria bicolor
Pathway
lbc03020  RNA polymerase
Brite
KEGG Orthology (KO) [BR:lbc00001]
 09120 Genetic Information Processing
  09121 Transcription
   03020 RNA polymerase
    LACBIDRAFT_245901
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03021 Transcription machinery [BR:lbc03021]
    LACBIDRAFT_245901
Enzymes [BR:lbc01000]
 2. Transferases
  2.7  Transferring phosphorus-containing groups
   2.7.7  Nucleotidyltransferases
    2.7.7.6  DNA-directed RNA polymerase
     LACBIDRAFT_245901
Transcription machinery [BR:lbc03021]
 Eukaryotic type
  RNA polymerase I system
   RNA polymerase I
    Core subunits
     LACBIDRAFT_245901
SSDB
Motif
Pfam: RNA_pol_Rpb1_5 RNA_pol_Rpb1_2 RNA_pol_Rpb1_3 RNA_pol_Rpb1_1 RNA_pol_Rpb1_4 Rav1p_C
Other DBs
NCBI-GeneID: 6072016
NCBI-ProteinID: XP_001876601
JGI: 245901
UniProt: B0CXW7
LinkDB
AA seq 1711 aa
MNIAHSLPSTVAGVSFSFLTSQDIRRISVKQIVNPVLLDDLNRPNIGGLYDPSLGPSDRS
DICATCHLTYFTCPGHFGHIELPAPVFHPLFMTNMYNLLRGTCMFCHRFKMTRTVLWKFM
AKLRLLERGLLDAAQGVDDITLRVGRKQEKEKKRKSKKGDDGEEDQDDDEEDANDPEVPD
ETPQGFMTRINLYVAIHLHRASSSKRDNYKDGLVYQTRKDVINDFLKSCILKKCQNGDCG
SHAYTYRKEGHTKVIEYDLSVKQKAQLARRRPDVLLAEKAGNVVRQRNEDIDMDASEGPT
KPKEPQLPRAANGKIKTSRGRNERVVAPEECRAHLRRLFHNEAMMCSLLFGRHGPFAPIS
KDQLSFASADMFFLEVIPVAPTRFRPPAKLGEVLFEHPQNELLSKVLNTSYRMRDLSLDL
RAASQKTGNVDEGARKTLMSALLDRLVQLQVDVNSFMDSSKNPAPVRQSKLPPAGVKQGL
EKKEGLFRKHMMGKRVNYAARSVISPDVNIEPNEIGIPPVFARKLTFPEPVTPANFHELR
QRVITGPHGYPGATLVEYEDGHQQSLDKLTVEQRTAIANQLLTPQEGDRGSGRRGLYTRT
TAMNKKVYRHLRDGDILILNRQPTLHKPSMMAHKARVLTGEKTIRMHYANCNSYNGEFMA
ILQMNIHFPQNHVARAEAMMIANTDNQYLVPTSGNPLRGLIQDHVVAGVWMTCQDAFFTR
EEYCQLLYGALRPEEESRGARLVTLPPTIWKPKPMWTGKQIISTVLKNITPKPFEGLSLN
AKTKVPGYLWGADSKEDQVVFMDGELLCGVLDKAAFGATDYGLVHSVYELYGADVAGRLL
GVLSRLFTKFLQHRAFTCRMDDLILTPEGDGKRNDLIKRGENLGTEGAIENFPSLSSTPK
LEIAAELTTLLEDVLRDDNKMAGLDVTVKTKLSKLTSSISDICLPNGLLRKFPFNHMQTM
TLSGAKGSAVNARQISCALGQQELEGRRVPVMVSGKTLPSFKAFETKAIAGGYVVSRFLT
GIKPQEFYFHCMAGREGLIDTAVKTSRSGYLQRCLIKHLEGIRVHYDHTVRGSDNSIYQF
AYGGDGLDVTRQKHLYQFGFIVQNQISLARHIRPADIQNVVDESTAISYMKKVLKRSPDR
PDKNKPAKRDKYDPALSLYSPSRYLGSTSEQFAIAVDNYVKTNPHNLLAEKEDEVRFKSR
TPPLHPRNFRLLMNVKYMKSLVDPGEAVGLLASQGVGEPSTQMTLNTFHFAGHGAANVTL
GIPRLREIVMTASQKPKTPSMTMKVRPDITAEDITLFCKRASRVTLAQIVENVEVKEQLR
VEGETRRTQFTIEIKFFPKVEYQAEYDVEPSEILAVFATKFPLTLKREMQNEMKKLDADL
KSQIAELGKGKKAKSREGDDGNDGDDDEAPTKRKDDDEESEAGDGGADDEKRARQKKQQA
TYESDDSDVEDAEAFNDEDIEAAYAPETEAMELDAKPAKKDRAQSLKALISRMSDLFQGH
LPHATSFEFDESRCVFQLEFRLDMPKLLFVGIVERTCRATIVREIPGITECFQAKDEKKG
DITLTTNGSNFRGMWEFAVSSDESILEDDEIYSNDIYAILKTYGVEMARAAILREMGGIF
GAYNIQVDRRHLELIADYMTFDGGYKPFNRKGISTNPSPLLKASYETTGAFLSDATLYGD
FDDLSTPSGNIVLGRPNCTGTGVFDVVMGIA
NT seq 5136 nt   +upstreamnt  +downstreamnt
atgaatatcgcacattcgttgccttcgaccgttgcaggagtttccttttcatttctcacc
tcccaggatatcaggagaatatccgttaaacaaattgtcaatcccgttctactggatgat
ctgaatcgaccaaacattggaggtctctatgatccatccctcggtccaagcgaccgctca
gacatatgcgcaacatgtcacctcacgtattttacctgtccaggtcatttcgggcacatc
gagcttccagccccagtttttcacccactcttcatgaccaatatgtataatttgttgcgc
gggacctgcatgttctgccacagatttaaaatgactagaactgtgctttggaaattcatg
gcgaaactcaggcttctggaacgcggactgctggatgccgcacaaggtgttgatgatatc
acattacgcgtcggacggaagcaggagaaggaaaagaagcggaaatcgaaaaaaggagat
gacggggaggaagaccaagacgacgacgaagaagacgcgaatgaccccgaggttccggac
gaaactccccaaggattcatgacgaggattaacttatatgttgctattcaccttcaccgt
gcctcgagcagtaaacgcgacaactataaggatggattggtctatcaaacacggaaggac
gtcatcaacgatttcttgaagtcttgtatcttgaaaaagtgtcaaaatggcgactgtggc
tctcatgcgtatacgtatcgaaaggaaggccataccaaggtcatagaatacgatttgtct
gtaaagcagaaggctcagttggcgcggagacgaccggatgttttgcttgctgagaaagca
ggaaacgtggtccgacaacggaatgaagacatagatatggatgcgtcagaaggacccact
aagccgaaggagcctcagctcccaagagcagcaaatgggaaaataaaaacctctcggggt
cgcaatgagagggtggttgcgccagaggaatgccgtgcacatctacgtcgactcttccac
aatgaggccatgatgtgctccctcctctttgggcgtcatggtccatttgcaccaatatcg
aaggaccagctatcgttcgcctctgctgatatgttctttctggaagtcattcccgtcgcc
ccaactcgttttcggcctccagcgaaattgggcgaggtcctttttgaacatcctcagaac
gagcttctctctaaagttctcaatacatcataccgaatgcgggacctgagtttagatcta
cgggctgcttcacagaagaccggaaacgttgatgaaggggcgcggaagactctgatgagt
gcgctactcgatagattggtccagctacaggttgacgtcaacagttttatggatagcagt
aagaaccctgctcctgtaaggcaaagcaagcttcccccagctggtgtaaaacaagggctt
gaaaaaaaggagggtcttttccgaaagcatatgatgggaaaacgagtcaactatgctgct
agatcagtcatttcgcctgatgtaaatatcgagccaaacgaaattggaattccaccagtt
tttgcaagaaaattgacattcccagaacccgttacacctgccaacttccacgaactacga
caacgggtaataactggtccgcatggttatcctggagctactttggtagaatatgaagac
ggccatcagcaatcacttgataaactcaccgttgaacaacggacagccattgcaaatcaa
cttctaactccacaagagggtgaccgtggaagtggacgccgaggtctatacacccgaacc
actgccatgaacaagaaagtttatagacatcttcgagatggggacatccttattctgaat
agacaaccgactttgcataagcctagtatgatggcgcacaaagctcgtgtactgacagga
gagaagaccatcaggatgcactatgcaaattgcaattcttacaatggcgagtttatggca
atcttacagatgaatattcattttcctcagaaccatgtggcgcgggctgaggcaatgatg
attgcgaatacggacaatcaatatctagtgccaacatctggaaatccacttcgtggtctc
attcaagatcacgtagtcgctggcgtgtggatgacatgccaagacgctttctttacccgc
gaggagtactgtcagctactttatggtgctcttcgtcctgaagaagaaagtcggggcgct
cgtttggttacattaccccctaccatctggaagccaaagccaatgtggacaggaaagcaa
atcatctccaccgtcctcaagaatatcacccccaagccattcgagggcctttctcttaac
gcaaagacgaaagtacctggttatctttggggtgccgattcaaaagaggatcaggtcgtt
ttcatggatggagaacttttatgtggggtgctggacaaagcggcattcggtgctacggat
tatggccttgtccactctgtgtatgagctctacggcgccgacgttgctggaaggttgttg
ggagtcttgagccgtctgtttactaaattcctacagcaccgcgcgttcacttgccggatg
gatgatcttatcctcactccggaaggtgatgggaagcggaacgacttgatcaaacgcggg
gaaaaccttggaacggaaggggctatcgaaaatttcccttcactcagcagcacgcccaag
ctcgaaattgctgcagagttaacaacgctgcttgaggatgtcttgagggacgacaacaag
atggccgggctggatgttaccgtcaagacgaaactgtccaagctcacgtcgtcgatatcg
gacatatgtttgcccaacggcctccttcggaaattcccctttaaccacatgcagacaatg
acactgtcgggtgcgaaaggctcagccgtcaatgcacgacaaatttcttgcgctctgggt
cagcaggaattggagggtcggcgtgtacctgtcatggtcagtgggaagacgcttccttcg
ttcaaagcttttgagaccaaggccattgctggtggatacgtcgttagtcgtttcctaacc
ggtataaagcctcaggagttctacttccattgcatggctggccgagaagggttgatcgat
acagccgtcaagacttctcgctcaggctaccttcagcgatgtctcatcaagcatcttgaa
ggaattcgtgtgcattatgaccacacagtcagaggcagtgacaactccatttatcaattt
gcctatggaggggatggtcttgacgtgaccaggcaaaagcacctgtaccaatttggtttc
atcgtacaaaaccaaatctccctcgcccgccacattagaccagctgacatccaaaacgtt
gttgacgaatccaccgccatctcgtacatgaagaaagtgctcaaacggtcgccagatcgc
ccggataaaaacaaaccagcgaaacgtgacaagtacgatccggcgttgtcactgtacagc
cctagccgataccttggaagcacttcagaacaatttgccatagcagtcgataattatgtg
aaaacgaatcctcacaatcttctagcagaaaaggaggatgaagttcgttttaagagtcga
acaccgccacttcatcccagaaacttccgactcctcatgaacgtcaaatatatgaagagt
ttggtcgatcccggagaagcagtgggtctattggcatcccaaggtgttggcgaaccatcc
acccagatgacgctgaatacttttcactttgctggtcacggtgccgccaacgttacgctt
ggtatccctcgtctccgtgaaatcgtcatgacagcctctcaaaaaccaaagacaccctcg
atgacaatgaaagtccgccccgacataacggcagaagatattaccttgttctgcaagaga
gctagtagagtcaccctagctcagatcgtggagaatgttgaagtcaaagaacaactccga
gtggaaggagaaactcgaaggacacagttcacgattgaaatcaagtttttccccaaggta
gaatatcaagccgagtacgacgtggaaccttcagaaattcttgctgtattcgccaccaaa
ttccctctaaccctcaagagggaaatgcagaatgagatgaagaagctggatgcagacttg
aaaagtcaaatagccgagctaggcaaagggaagaaagccaagtcccgagagggcgacgac
gggaatgacggtgatgatgatgaggccccgacaaagaggaaggacgatgatgaggaaagc
gaagccggtgacggtggggcggatgatgagaagcgtgcgcgacaaaagaagcaacaggcg
acgtatgagagcgatgactcggacgttgaggatgctgaggcgttcaatgatgaagatatc
gaagctgcatacgctcctgaaactgaagcaatggaattggatgcgaaacccgcaaagaaa
gatcgtgcacaatcgctcaaagcgttgatcagtcgcatgtcggacctcttccaaggccac
ctgcctcacgcgacgtcttttgaattcgatgagtcgagatgcgtctttcagctagagttc
cggcttgacatgccaaaattgttgtttgttggcattgttgagcgaacgtgtcgggcgacg
atcgtccgcgaaattccagggatcacagaatgtttccaggcgaaggatgagaagaaaggg
gacatcacgctcaccaccaacgggtccaacttccgtgggatgtgggagtttgctgtgagc
tctgatgagagcattctggaagacgacgaaatctattccaacgacatctacgcgatcctc
aagacatatggggtggaaatggcccgtgcagctatcttgcgtgaaatgggaggaatcttt
ggagcgtacaacatccaagtggacagacggcatcttgagctcattgctgactacatgact
tttgatggtggttacaagccgtttaaccgcaagggaatctcgacgaatccatctccgctt
ctgaaagcctcttacgaaacgacgggtgcattcttgtcagatgcaactctgtacggggac
tttgatgatttgagcacaccgtctggcaacattgttttgggtcgacctaattgtacgggt
acaggggtgtttgatgtggtcatgggaatagcgtga

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