KEGG   Laccaria bicolor: LACBIDRAFT_293575
Entry
LACBIDRAFT_293575 CDS       T01044                                 
Name
(RefSeq) hypothetical protein
  KO
K14328  regulator of nonsense transcripts 3
Organism
lbc  Laccaria bicolor
Pathway
lbc03013  Nucleocytoplasmic transport
lbc03015  mRNA surveillance pathway
Brite
KEGG Orthology (KO) [BR:lbc00001]
 09120 Genetic Information Processing
  09122 Translation
   03013 Nucleocytoplasmic transport
    LACBIDRAFT_293575
   03015 mRNA surveillance pathway
    LACBIDRAFT_293575
 09180 Brite Hierarchies
  09182 Protein families: genetic information processing
   03019 Messenger RNA biogenesis [BR:lbc03019]
    LACBIDRAFT_293575
Messenger RNA biogenesis [BR:lbc03019]
 Eukaryotic type
  mRNA surveillance and transport factors
   Surveillance factors
    Surveillance complex
     LACBIDRAFT_293575
   mRNA cycle factors
    P-body specific factors
     LACBIDRAFT_293575
SSDB
Motif
Pfam: Smg4_UPF3 DUF3915
Other DBs
NCBI-GeneID: 6074644
NCBI-ProteinID: XP_001878990
JGI: 293575
UniProt: B0D4A2
LinkDB
AA seq 520 aa
MSTSPSRPKGPPTKPKKERERERERERKEKALQQSIERLKTVVRRLPPNLPEDVFWQSVQ
PWVTEESVSWKVFYAGKSRKRLSKENIPSRAYIAFKSEEKLAQFSREYDGHLFRDKAGNE
SYAIVEFAPYQKVPTEKRKPDARNATIEKDEDYISFIDSLNASANAEPPTLEALIASTQQ
APQPKTTPLLEALKAEKSANKDKEAILRNHAHYKDQLPGALLARKDDKKKVPPAVQAQKV
AAEAAAGNKKAAGKKPQVAPSPAAALNQNQNKPGQVGLPKSVAGPSNLGAKPPPKPARAP
RAPPPPSQPKPQNVPITAIQQQPGPSTPQQQPASSDGTTTPTPRRTRPVIGLGSRQFEAA
LSGVAGGKSRREREREREREREKEREEGAVTPTAAFVPAPGLALMASNIKEAPGKPAGPP
TSPRRGRRGSHGGGGGGSGGGGIGRPPSAASDTKAPGIIQRADAPLIVQRDVPVVVGPPV
VNPVQIPMGVGPGRGGGGSLKEGTVIGGITAVVGGYPPSI
NT seq 1563 nt   +upstreamnt  +downstreamnt
atgtcaacatccccaagtcgacccaaaggcccacccacgaaacccaaaaaagaaagagaa
cgtgagagggaacgtgagcgcaaggagaaagcactccaacaatcaattgaacgtctaaag
acagtcgttcgccggctaccacccaatctgcccgaggacgtcttctggcagagcgtacag
ccctgggtgacagaagaatctgtctcttggaaagtgttttatgctggtaaatctaggaag
cggttatcgaaggagaatatcccttcacgagcttacatcgcgttcaagagcgaggaaaag
ctcgcccaatttagcagggaatacgatggtcatttgtttcgagataaagcaggcaatgag
tcgtatgcgatcgtagagttcgctccgtaccagaaagttcctacggagaaacgaaagcca
gatgctcggaatgcaactattgagaaagacgaagactatatatctttcatcgactctcta
aacgcatcagcaaacgcagaaccacccaccctcgaagcactcatcgcttcaacccaacaa
gcaccccaacccaaaaccacacccctcctcgaagccctcaaagccgaaaaatcagcaaat
aaagataaagaagccatcctccgcaaccacgcacactacaaagaccaactcccgggagct
cttcttgctcggaaagacgataagaagaaagtaccccccgctgttcaagcgcagaaagta
gctgctgaagcagcagcgggaaataagaaggcggctgggaagaaaccgcaggttgcacca
tcccccgcagcagcattgaaccagaaccagaacaagccgggacaggtgggattaccaaaa
tccgtcgcaggcccttctaatctcggtgcaaaaccaccacccaaacctgcacgagcacca
cgagcaccccctcctccttcacaacctaaaccgcagaacgtacctatcactgcgattcaa
caacagccaggaccctcaaccccccaacaacaaccagcgtcatcagatggcacaacgacc
cccaccccgcggcggacgcgccccgttataggtctaggatcgaggcagttcgaggctgcg
cttagtggtgtggctggtgggaagtctagacgcgaacgggaacgggagagggagagggaa
agagaaaaggagagggaagagggcgccgttacgcctactgcggccttcgttcccgctcct
gggttggcactgatggctagtaacatcaaggaggcgccagggaaacccgccggaccaccc
acttcgcctcgcagagggaggagggggagtcatggagggggaggtggtgggagtggtggt
ggtggaattggcaggcctccttctgctgcttctgacacgaaagctccggggattatacaa
cgcgcggatgcgccgttgatcgtgcagagggatgtgcctgttgttgttgggccacctgtt
gttaacccagttcagattcccatgggcgtgggtcctgggagagggggtggaggttctctc
aaagagggaacggttatcggtggaataacggccgtggtagggggatatcctccttctatt
tga

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