Leptopilina boulardi: 127283334
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Entry
127283334 CDS
T08910
Name
(RefSeq) exosome component 10
KO
K12591
exosome complex exonuclease RRP6 [EC:3.1.13.-]
Organism
lbd
Leptopilina boulardi
Pathway
lbd03018
RNA degradation
Brite
KEGG Orthology (KO) [BR:
lbd00001
]
09120 Genetic Information Processing
09123 Folding, sorting and degradation
03018 RNA degradation
127283334
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03019 Messenger RNA biogenesis [BR:
lbd03019
]
127283334
Messenger RNA biogenesis [BR:
lbd03019
]
Eukaryotic type
mRNA degradation factors
3'-5' decay
Exosome cofactors
127283334
BRITE hierarchy
SSDB
Ortholog
Paralog
GFIT
Motif
Pfam:
DNA_pol_A_exo1
HRDC
PMC2NT
RNase_H_2
Motif
Other DBs
NCBI-GeneID:
127283334
NCBI-ProteinID:
XP_051164077
LinkDB
All DBs
Position
Unknown
AA seq
860 aa
AA seq
DB search
MLKNYLNKMITDKEENNDSNDGDKINQETANIQKILPGFDTFDDYMKAGFNAMKEGIKIT
NSLPSEDNFKYYSCFPSFNNARHYQSERILKLIQGIINLTGAATDVNRRSIEEKLDLLVE
ANDIFLDRANVYMNEECGIKPNAEVQLIVAQTKKSVNINGSWNTVNRDSSATSSTGNAPS
VRLLGAKNVQRPQLTFKDKVDNSSKAWIPRIKEKPNALKPLSIYLKKGTDVCHPYEYELN
TFQVPINQLEENSPLKYKLLEETPIIMIEKESDLSILLNDLENYNEIAVDLEHHSYRSFQ
GITCLMQISTRDTDYLIDTLSLRSELYKLNQVFTKPTVLKVFHGAEFDIQWLQRDLSLYV
VNMFDTYQAAKQLELPYLSLAYLLKTYCGIEPNKHFQLADWRIRPLPQELIKYAREDTHY
LLYIKDVLRNALIQVSNGKTNVLKAIYDRSTQVCKKMYVKSIWTEETCLNMYRKSQKMFN
NRQLYALKELHKWRDETAREEDDSVSYVLPNHMMLNIAETLPREMQGILACCNPIPPLVR
QNLLRLHKIILKAREQPLIKPVLEDDIRQRMTQRSHVAQSETWIYSPHDTPQGTEPRANL
TCLLNSKSTNETIIFKKVEDHDITVFDNASDDEEVGISKQTLSDNKKLPFVSPFERYKRV
MPMIAEQEAKEREKQEVEMNILTNKDKNESIQRVQEHFNQIVKSKCSSISVSTPLSQMHN
KKRKMHSINDKSEKYVKENSTYDISAQAEIFNKNKIIKENVKTDKEENIPEKFNDETHSK
IGIVQDLQSLRPKKKGVKQETVKILNAKGMLPSKNFNYSAVDFSSFQGGSNIGKQNNIET
VFKQNKEKHKRIGQRKRRKI
NT seq
2583 nt
NT seq
+upstream
nt +downstream
nt
atgttgaaaaattatttaaataaaatgattacagataaagaagagaataatgattccaat
gatggtgataaaattaatcaagaaaccgcaaatatacaaaaaattcttcctggctttgat
acttttgatgactacatgaaagctggttttaatgccatgaaagaaggaattaaaatcacc
aacagtctgccatctgaagataactttaaatattattcatgttttccaagtttcaataat
gcaaggcattatcaaagtgaaagaattttaaagttgatacagggtattataaatttaaca
ggtgcagcaaccgatgttaatcgacgaagtattgaagaaaaacttgatcttttggtggaa
gctaatgatatatttttagaccgagctaatgtctatatgaacgaagaatgcggtataaag
ccaaatgcggaagtacaattgattgtagctcagactaaaaaatctgttaatattaatgga
agttggaatactgtaaaccgagactcatccgctacttctagcactggcaatgctccatct
gtacgattgttgggtgcaaaaaatgttcagagaccacaattaacttttaaggataaagtt
gataatagttcaaaagcctggataccacgaattaaagagaagcctaatgctttaaaacca
ctttctatatatttaaaaaaaggaacggatgtttgccatccttacgaatatgaactaaat
acatttcaagtgcccattaatcaattggaggaaaattcaccattgaaatacaaattatta
gaggaaacacctataattatgatagagaaagagtctgatttatcaattttattaaatgac
ttggagaattataatgaaatagctgttgatttagagcatcattcttatagaagttttcaa
ggaattacatgtcttatgcaaatatccacacgagatacagattacttgattgatacttta
tctttacgatcagaattatacaaacttaatcaagttttcacaaaaccaacagtcttgaaa
gtatttcatggagctgaatttgatattcagtggcttcagagggatttatcactatacgtg
gtaaatatgtttgacacctatcaagcggccaaacaactagaattaccttatctaagttta
gcatatttattgaaaacttattgcggaatagaacctaataaacactttcaattggccgat
tggcgtataaggccactacctcaagagcttataaagtatgcgagagaagatacacattac
ttattatatataaaagatgtgttaaggaatgctttgatacaagtctcaaatggtaaaaca
aatgtcttgaaagctatttatgatcgcagtacccaagtttgtaaaaaaatgtacgtaaaa
tctatttggactgaagaaacttgtttaaacatgtatagaaaaagtcaaaaaatgtttaat
aaccgacaactatatgcacttaaagaacttcacaaatggagagatgaaaccgcaagagaa
gaagatgatagtgttagttatgttttacctaaccatatgatgttaaatattgccgaaact
cttccaagagaaatgcaaggcatattagcttgttgtaatcctattccaccattggtgaga
caaaatttactaagattacataaaataatattgaaagcacgagaacaaccacttataaag
ccagttttggaagatgacatcagacaacgcatgactcaaagaagtcacgtcgctcaatca
gagacgtggatttattctcctcacgatacaccgcaaggaacagaacccagagccaacttg
acatgtcttctaaattccaaaagcacaaatgaaacaattattttcaagaaggtagaggat
cacgacataacagtatttgataatgcttcagatgatgaagaagtagggatatcaaaacaa
acattatctgataacaaaaaattaccttttgtaagtccctttgaaaggtacaaacgtgtc
atgccaatgatagctgaacaagaagctaaagaaagagaaaaacaagaggttgagatgaac
attttaacaaataaagataaaaatgaaagcattcaaagagtacaagaacattttaatcaa
attgtaaaaagtaaatgttcatcaattagtgtcagcactcctttaagtcaaatgcataat
aagaaaagaaaaatgcactctattaatgacaaaagtgaaaaatatgtaaaagaaaattct
acatatgacattagtgcgcaagctgaaattttcaacaaaaataaaattattaaagagaat
gtgaaaactgataaagaggagaatattcctgaaaaattcaatgatgaaacacattcaaag
attggaatagtccaagatttacaatcactgagaccgaagaaaaaaggtgttaaacaagaa
actgtaaaaatattaaatgccaagggaatgctcccatcaaaaaattttaattatagtgct
gttgactttagcagttttcaaggaggtagtaatattggtaaacaaaataatatagaaaca
gtctttaaacaaaataaggaaaaacacaagagaataggacaacggaaacgaagaaaaatt
tag
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integrated database retrieval system
