Nicoliella spurrieriana: MOO44_06140
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Entry
MOO44_06140 CDS
T08428
Symbol
holA
Name
(GenBank) DNA polymerase III subunit delta
KO
K02340
DNA polymerase III subunit delta [EC:
2.7.7.7
]
Organism
lbe
Nicoliella spurrieriana
Pathway
lbe03030
DNA replication
lbe03430
Mismatch repair
lbe03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lbe00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
MOO44_06140 (holA)
03430 Mismatch repair
MOO44_06140 (holA)
03440 Homologous recombination
MOO44_06140 (holA)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lbe03032
]
MOO44_06140 (holA)
03400 DNA repair and recombination proteins [BR:
lbe03400
]
MOO44_06140 (holA)
Enzymes [BR:
lbe01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
MOO44_06140 (holA)
DNA replication proteins [BR:
lbe03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
MOO44_06140 (holA)
DNA repair and recombination proteins [BR:
lbe03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
MOO44_06140 (holA)
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_delta
DNA_pol3_delta_C
DUF4087
DUF6181
TRAPP
Motif
Other DBs
NCBI-ProteinID:
UQS87506
UniProt:
A0A976RTG7
LinkDB
All DBs
Position
1116225..1117277
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AA seq
350 aa
AA seq
DB search
MVANLKLIWRGEQVNYYEISDQVKNRNLKSLYLITGKQEYLIDQLKNQFINVIPKDERTM
NFASYDMETTPLDDAMNDAMSAPFFGEHRLVIINNPLFLTGEKSKNKIDHDIDSLLKYIQ
KPMPSTILVIIAPYEKLDARKKIVKQLKKAAVQVDLQSVNEFETKQYVNTFLNQHGYQID
SRVMDQLIQRTDGQLSAIMSDLPKVMIYCHQDKQITTNAVNSLVTKTLNQNIFTLVDMVL
RKQTTYAVSLYQELIMEGQSSIQINAVLLGQFRLLLQVLVLSKYGYSQGKLASALKVHPF
RVKLAMQTIRKYHFTELKRAFLGLSDIEKQLKSTNESPELLFEMFMLKFA
NT seq
1053 nt
NT seq
+upstream
nt +downstream
nt
atggtggcgaatttaaaacttatatggagaggtgagcaagtgaattattatgaaataagt
gatcaagttaaaaataggaatctaaaatcactgtatttaattactggcaagcaggagtat
ttgattgaccaactaaaaaatcaatttattaatgtaatcccaaaggacgaacgaacaatg
aattttgcaagttacgatatggaaaccactccactggatgatgcaatgaatgatgcaatg
tctgcacctttttttggtgaacaccggttggtgattataaataatccattatttttaact
ggtgaaaaaagtaaaaataagatcgatcatgatattgattctcttttaaaatacattcaa
aaaccaatgccttcaactattttagtgataattgctccttatgaaaaattagatgctaga
aaaaagattgttaaacaattaaaaaaagctgctgttcaagtagatttacagtcagtaaat
gaatttgaaactaagcaatatgtaaatacttttttaaatcaacatggatatcaaattgat
tcgcgtgttatggaccaattaattcaaagaactgatggtcaattatctgctattatgagt
gatttacctaaggtgatgatatattgccatcaagataaacaaataactactaatgcagtt
aatagtctggtgactaagactttaaatcaaaatatttttacccttgttgatatggtatta
agaaaacaaacaacatatgcggtaagtctatatcaagaactaataatggagggccagtcc
tccattcaaatcaatgctgttttattaggtcaatttagattattattgcaggtattggtg
cttagtaaatatggatatagtcagggaaaattggcaagtgcactaaaagtacacccattt
cgggttaaattagcgatgcaaacgattcgtaaatatcattttacagagttaaaacgtgcc
tttttaggattaagtgatattgaaaaacagttaaaaagtactaatgaatcaccagaacta
ctttttgaaatgtttatgttaaaatttgcataa
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