Levilactobacillus brevis KB290: LVISKB_1217
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Entry
LVISKB_1217 CDS
T02528
Name
(GenBank) DNA polymerase III subunit alpha
KO
K02337
DNA polymerase III subunit alpha [EC:
2.7.7.7
]
Organism
lbk
Levilactobacillus brevis KB290
Pathway
lbk03030
DNA replication
lbk03430
Mismatch repair
lbk03440
Homologous recombination
Brite
KEGG Orthology (KO) [BR:
lbk00001
]
09120 Genetic Information Processing
09124 Replication and repair
03030 DNA replication
LVISKB_1217
03430 Mismatch repair
LVISKB_1217
03440 Homologous recombination
LVISKB_1217
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03032 DNA replication proteins [BR:
lbk03032
]
LVISKB_1217
03400 DNA repair and recombination proteins [BR:
lbk03400
]
LVISKB_1217
Enzymes [BR:
lbk01000
]
2. Transferases
2.7 Transferring phosphorus-containing groups
2.7.7 Nucleotidyltransferases
2.7.7.7 DNA-directed DNA polymerase
LVISKB_1217
DNA replication proteins [BR:
lbk03032
]
Prokaryotic type
DNA Replication Elongation Factors
Elongation factors (bacterial)
DNA polymerase III holoenzyme
LVISKB_1217
DNA repair and recombination proteins [BR:
lbk03400
]
Prokaryotic type
SSBR (single strand breaks repair)
MMR (mismatch excision repair)
DNA polymerase III holoenzyme
LVISKB_1217
BRITE hierarchy
SSDB
Ortholog
Paralog
Gene cluster
GFIT
Motif
Pfam:
DNA_pol3_alpha
DNA_pol3_finger
HHH_6
PHP
tRNA_anti-codon
tRNA_anti_2
Motif
Other DBs
NCBI-ProteinID:
BAN06852
UniProt:
M5AES0
LinkDB
All DBs
Position
complement(1224930..1228334)
Genome browser
AA seq
1134 aa
AA seq
DB search
MGLTILKTKGAAGMFVPLQVFSTYSLLQSTNRIDDLVQTAKKRGYTALALADKNVMYGAV
AFYNACRQADIKPLLGLTLTAQGLNDATQAYDWVFLAQNFTGYQQLMQLSTAYQVGGGPV
DLTQLTKNLSQLTMIAPLDSEIHTLVANDQLAPAQQILHQLNDWSVGQLAIGVSPDLTAV
SRDHLQSLSQATTTPLVALSPVAYLNRDDHFAVTVLRAIDAGETISDPTTEQQVQGTHWL
RPAAEETQRFANVGLTAAVTMTASIAAASTVTLQFQQPQLPQFPTPNQENSRDYLRERCV
AGLKRRLTANHITDAMPYQQRLDHELGVIHRMGFDDYFLIIWDVMNFAHQANIQTGPGRG
SAAGSLVAYVLAITEVDPLAYDLLFERFLNEERAQMPDIDLDIPDNRREQVLQYVHDKYG
HERVAQIITFGTLAAKAALRDVGRVLGMAPYELSDWSAAIPAELHITLQRAYDQSQRLRN
LVADSSRNQLLFATAQKLEGLPRHYSTHAAGIVLSQGPLRDLVPLQPGSEELLMTQYPKD
TVEAVGLLKMDFLGLRNLSILANALALVKKQTGKIVDLNQIDLNDPATLKLFATGETNGV
FQFESSGIKRVLRQLQPDSFELVAAVNALYRPGPMENIDTFIRRKNGQEPVTYPADALAP
ILGPTYGVLVYQEQVMQVASVMGGFTLGQADLLRRAMSKKKKQTMDAMQKQFVAGAQQRG
YELAVAQRVFAYIDRFANYGFNRSHAVAYSKLAFQLAYLKAHYPAAFYASLMNSVINVGA
KTKVYLTEAKRHGVTVLPPDINRSTAYFNLYHSAIIFGLSSIKGVRRDFLREVLAERHEH
GPFKDLHQFLERIASKYRKADLLNALVYAGAFDHFGHNRAELIAALPEFISSVELSGDNV
ELIAALAPKIKSQPDLDLMTKLSQEEAVLGAYLSGHPVEQYQQLGRQLQAQAVSELTANT
RVTVLLYVIKIRQIRTKRGEPMVFVTGSDETADVSVTIFPNQFRQISEWLATDQVIVVRG
KVEQQRGLQIVADQVSLADQIPVKPVADQHTTPTLPAGARWFIRVDQQHTDRAIAQQLAQ
FLTAHRGPVPVIVYQPQTDEKRILPKTQWLQADAQLKVTLEALMGTGNAIFQNG
NT seq
3405 nt
NT seq
+upstream
nt +downstream
nt
atgggactaacgattttgaagacgaaaggagctgcaggcatgtttgtaccgttacaggtg
ttcagcacctatagtttattacagagcaccaaccggattgatgatctcgtccaaacggct
aagaagcgggggtacactgcactggcattggcggataagaatgtgatgtacggtgccgta
gctttttataatgcgtgtcgacaagccgacattaagccacttttaggactaacgctaacg
gcacaggggctgaacgatgccacgcaggcctacgattgggtctttttagcgcaaaatttt
acgggctaccaacaactcatgcaattatcgacggcgtatcaggttggcggtgggccagtt
gacttgacccagttgaccaaaaaccttagtcagctgactatgattgccccattagatagt
gaaatccatacgttggtagccaatgaccaactagcgccggcccagcagattctccatcag
ctaaatgactggtcggtgggccaactggccatcggcgtgtcaccggatttgactgctgtg
agtcgtgaccacttacaaagcctcagtcaggcaacgacaacgccgttagtggcgttatca
ccggtcgcgtatttgaatcgagacgatcattttgcggtcacggtgttacgagcgatcgat
gccggtgaaacgatcagtgatccgacgactgaacagcaagttcaagggactcattggtta
cggccggccgccgaggaaacccagcggtttgctaacgtgggattgacggctgctgtgacg
atgacggcgtcaattgctgctgctagcacggtgacgttacaatttcagcaaccgcagttg
ccacaatttccgacccccaatcaggagaactcccgcgattatttgcgtgagcgctgcgtg
gcgggtctaaagcgtcgactaacagctaaccacattaccgatgcgatgccttatcagcaa
cgcttggatcatgaacttggggttattcaccggatgggcttcgatgattatttcctaatt
atttgggatgtgatgaactttgcccatcaagcaaatattcaaaccgggcccggtcgagga
tcagctgcagggtcattggtggcctatgttctagccattactgaagtggacccgctggct
tatgatctgttgtttgaacggtttttaaatgaagagcgggcccaaatgcccgatattgat
ctggatattccagataatcggcgggaacaggttttgcaatacgttcatgataaatatggt
catgaacgggtggctcagattattacctttgggacactagcggctaaggccgcattgcgg
gatgtcggccgggttttggggatggcgccttacgagcttagcgactggagtgcggccatt
ccagccgagctacacatcactttgcagcgggcctatgatcagtcacaacggttacgtaat
ttagttgctgatagctcgcgtaatcaattgttgtttgcgacggcacagaagttagaggga
ttgccgcggcactattcaacccatgcggctggtattgttttaagtcagggaccactgcgt
gatttggtgccgttacagcccggaagcgaagaactactgatgacgcaataccccaaagac
accgttgaagcagttggtctgctaaaaatggacttcttagggttacgtaatttgagcatt
cttgccaacgccctggcattggtgaaaaaacaaactggaaaaatcgtggaccttaatcag
attgatttaaatgatccagcaacactaaagctgtttgcaaccggtgagacaaacggggtt
tttcagtttgaatcttctgggattaaacgggtcttacgccaactccagccggatagcttt
gagctggtggccgcggttaatgcgctctaccgaccgggacctatggaaaatatcgatacg
tttattcgccggaaaaacgggcaggaaccggtcacttatccggctgatgctttagcgcca
atcttaggcccaacgtatggtgtcttggtttaccaagaacaagtcatgcaagttgcttct
gtgatgggcggcttcacgctgggccaagccgacttattgcggcgggcaatgagtaaaaag
aaaaaacaaacgatggacgccatgcaaaaacaattcgtggcgggtgcccaacaacggggc
tatgagctagcggtggcacaacgggtctttgcctatattgaccggtttgcaaactatggt
tttaatcgctcacacgcggttgcctatagtaagttagcctttcagttagcttacttgaag
gcccattacccagccgccttttacgcgtccttgatgaactctgtcattaatgttggtgct
aagacgaaggtctatctgaccgaagctaaacgacatggcgtaacggtcttaccgccggat
attaaccgctcaacagcttattttaacctgtatcactcggcaattatctttggtttaagt
agcatcaagggggttcgccgtgatttcttgcgtgaagtcttagctgagcggcatgagcac
gggccatttaaggatctgcatcagttcctcgaacggatcgcatcgaaataccggaaggcc
gatctacttaatgctttggtgtatgcgggggcatttgaccattttggtcataatcgagcg
gaattaattgcggcgttgccggaattcatcagcagtgttgagttgtcaggagacaatgtg
gaactaattgcggcgctggctccgaaaatcaaatcacagcctgatttagatttgatgaca
aagctgagtcaagaagaagcggttttgggggcctatttgtcggggcatccggttgagcaa
taccaacaactgggtcgacagttgcaggcccaagccgtgagtgaattgacggccaatact
cgcgtgacggttttgctttatgtgattaagattcggcagattcgaacgaaacggggagaa
ccaatggtgtttgtaactggcagcgatgagactgccgatgtgagtgtcacgatttttcct
aaccagtttcggcagataagcgagtggttagcaacggatcaagtgattgtggtgcgcggt
aaggttgagcagcagcggggattacaaattgtggccgatcaagtcagtctggctgatcag
attcccgttaagccggttgccgaccagcacacaacgccaacgttaccggctggtgcgcgg
tggttcattcgagtcgaccagcagcatactgatcgggcaattgcccagcaactggcacaa
tttctaacggcgcatcgaggaccagtaccagttatcgtatatcaaccgcagaccgatgag
aagcgaattttgccgaaaacccagtggttgcaggcggatgcacaactgaaggtgacttta
gaagccttgatgggaacaggaaatgctatttttcaaaatggatag
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