Entry |
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Symbol |
recC
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Name |
(GenBank) Exodeoxyribonuclease V, gamma subunit
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KO |
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Organism |
lbl Leptospira borgpetersenii L550
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Pathway |
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Brite |
KEGG Orthology (KO) [BR:lbl00001]
09120 Genetic Information Processing
09124 Replication and repair
03440 Homologous recombination
LBL_2394 (recC)
09180 Brite Hierarchies
09182 Protein families: genetic information processing
03400 DNA repair and recombination proteins [BR:lbl03400]
LBL_2394 (recC)
Enzymes [BR:lbl01000]
3. Hydrolases
3.1 Acting on ester bonds
3.1.11 Exodeoxyribonucleases producing 5'-phosphomonoesters
3.1.11.5 exodeoxyribonuclease V
LBL_2394 (recC)
DNA repair and recombination proteins [BR:lbl03400]
Prokaryotic type
DSBR (double strand breaks repair)
HR (homologous recombination)
RecBC pathway proteins
LBL_2394 (recC)
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SSDB |
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Motif |
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Other DBs |
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LinkDB |
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Position |
1:2835568..2838963
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AA seq |
1131 aa
MSITHITSLSLEDMAVELSRNILEERKNSPLHSPVIVVPSTNMKLWLNLNLSRFSGLSAN
LRFLYLEKALEEYFHLRANLDYDPFQRAFPSREATQRKILTFLIENVNSKETIFLRSFLE
NITRAFSLSAKLTSLYKDYELNRSSWIQSWAKEKGIDIPMISRRPSPFPQEDEYYRFQKV
LYQKVFLNSKEPNTLVQFFLKEIQKDKTHSPRNFPSLHLFCLSNLADTYLGILESLSQKD
KLPIYLYQFHTGYVSNANNSLGPERWSDSQTHIALRTASVPGIIFKNLESVHTYPKKLAT
LRNILKGNQNCDNLQDLSQDASVRFWNAPSPYREMESAANDILYRINQDHRLTYLDFAIL
VTDMRVYRPAVEWVFDGGILLQTKADADPIRKKIPYSLTDIKANEASLLYRGLMDFWEIC
SGNSIDKRSLLKFLRNPLLHSNIRSNSESLSILEKLIDTSGVQYEESGREKDSFQISNGL
KRIRLSSILSQETAWTKYKIAPIFLESDEHSFLLTNFWETVLKAKNDILSFSEGKTIRWT
PDYLKTVRASLEELFEFPGKYEQEGKLFQNWSESLLEWEGIRLHNKEEGISLLKFVTEQT
FDQIPYRKGAYLTGGVTISLLQPMRPLPFKHIYILGLGEGKFPGSNDRSQLNLRKDFREE
WDISHREIQESLLWETIHSAKESLTLSYVGKNLQEDKTFEPCSHLFEIMESLQIKKAVEL
PLHSYSIKYKHTSEELKQGLVSYDFGRVWVNGNRNDYTILDRFQNPKELAKTSSTPLSSG
IDVKELSQFLSDPLDTYLKRKLGMYLEEEESSDYEKEIFDLDAIAETSILRKVHALMVPD
LVSKESWSWDREKILQVLSPILEMERSSAKFPRSVFGKIQETDLVRYLVTTSENLFEWKP
IFQGGTYYPYLSLGDTGLSDSICKKMPELKVPLESGRFSIKGEWEHVIEKDGNLYWLFSK
SLEEKPSEDYLGYKDYWRTMSFPFLTGVAFASSNENFKVYSFKPRPSEESKKKNTLTLEY
RIGSPSIGIEYLAKILMEYLKTEPVFFPRKAFLNYYLKNIQGDSKNKTLDDVFDDESAWI
RFLKEELNEVKSGLSSLVKLYPKTPNLILQSRIQWAKNFYKPFLDWRKDDL |
NT seq |
3396 nt +upstreamnt +downstreamnt
ttgtcaatcactcacatcacaagtttatcgctcgaagacatggccgtagaactctctagg
aatatcctcgaagaaagaaaaaattctcctttgcattcccccgtaatcgtagtcccgagc
acgaacatgaaactttggttgaacctaaatctttctcgattctccggactttccgcaaat
cttcgattcctttatctcgaaaaagctcttgaagaatactttcacctcagagcaaacctg
gactatgatccgttccaacgcgccttcccaagccgggaggcaactcaaagaaaaattctt
acctttctgatagaaaacgtaaattcaaaagaaacgatattcttacgctcgttcctggag
aacatcacgcgagctttttctttgagcgcaaagctgacttcgctttataaagattacgaa
ttaaaccgatcctcttggattcaaagttgggcaaaggaaaaaggaatcgatattcctatg
atctctcgccgaccgtccccgtttccccaagaggacgagtactaccgttttcaaaaggta
ttgtaccaaaaagtttttttgaattctaaagaaccgaataccctcgtccaatttttcctc
aaagaaatacaaaaagacaaaacgcattcccctcgtaatttcccttccctgcatcttttt
tgtttgtcgaatctcgcagacacgtatctcggaattttagaatccctttctcaaaaagat
aaacttccgatctatctgtatcaatttcatacaggttacgtttcaaacgcgaataactct
ctcggaccggaaagatggtccgattcccaaactcatatcgctttgagaaccgcttccgtt
cccggaatcatttttaaaaatctggaaagtgttcatacgtatccgaaaaagctcgcaacc
cttcgaaacattctgaaagggaatcaaaactgtgataacctccaagatctttcgcaagac
gcttcggttcgattctggaacgctccctctccgtatcgggaaatggaatcggcggcaaac
gatattctctataggatcaatcaggaccatcgattgacttatttggattttgcgattctc
gttacggatatgcgggtctatcgtcccgccgtcgaatgggtgtttgacggcggaattctt
ttacaaactaaagcggatgcggacccgattcgtaagaaaatcccttattctttgacggat
attaaggcgaacgaagcctctttactttatcgaggtttgatggacttttgggagatctgc
tccgggaactccatcgacaaaagaagcctactcaaatttcttagaaaccctctcttacac
agtaatattcggagtaattcggaaagtttatcgattcttgaaaaactgatcgatacatcg
ggagttcagtacgaggagtcaggaagagagaaagattcattccaaatttctaatggactc
aaaagaatccgcctttcctcgattttatctcaggaaacagcttggacaaaatacaagatc
gctccgatctttctcgaatcggacgaacattccttcctcctcaccaacttttgggaaacc
gtcctcaaagcgaaaaacgacattctttctttttccgaagggaaaacaatccgttggacc
cccgattatctcaagaccgttcgagcttctttggaggaacttttcgaatttccgggaaaa
tacgaacaagaaggaaagctctttcaaaattggtcggaatctcttttagagtgggaagga
attcgattacacaataaggaggaagggatctctcttctgaaatttgttacggaacagacc
ttcgatcaaataccgtatcgtaagggagcgtatctcaccggaggagttacgatttcgctt
ctacaacccatgcgtccgctccctttcaaacacatttatatcctaggtttaggagaagga
aaatttcccggctccaacgaccgttcccaactgaatctcaggaaagatttccgggaagaa
tgggatatctctcacagagaaattcaagagtcccttttatgggaaaccattcactcggca
aaagaatctctcacattgagttatgtcggaaaaaatcttcaggaagataaaaccttcgaa
ccttgctcccatcttttcgaaattatggaatctctgcaaatcaagaaagcggtcgaactt
ccactacattcgtatagtataaaatacaaacatacttccgaagaattgaaacaaggcctc
gtgagctacgactttggaagggtatgggtaaacggaaatcgaaacgattatacgatcctt
gatcgtttccaaaacccgaaggaacttgccaaaacgagctctacgcccctttcatccgga
atcgacgtaaaggaactttctcaatttttaagcgatcccctggatacctatcttaaaaga
aaactcggtatgtatctcgaggaagaggaaagcagtgattacgaaaaggaaattttcgac
ttggatgcgattgccgaaacttccatattaagaaaagtgcacgctttaatggtgccggac
ttagtttccaaagagtcttggagttgggaccgggaaaaaatcctccaagtactttctccg
attttggaaatggaaaggtcttcggcaaaatttccaaggtccgtattcggaaaaattcaa
gaaacggatctcgttcgatatctcgtaacaacaagcgaaaaccttttcgaatggaaacct
atctttcaaggtgggacgtattatccttacttgagtttaggagataccggcctgtcggat
tcgatctgtaaaaaaatgccggaacttaaagtccctctagaatccggtcgcttttccatc
aaaggagaatgggaacacgtcatcgaaaaggacggaaacttatactggttgttttcgaag
agtttggaagaaaaacccagcgaggactatctcggttacaaggattattggagaacgatg
agttttccttttttaaccggagttgccttcgcttcttcgaacgaaaattttaaggtctat
tcctttaaaccccgtccttccgaagaatccaaaaagaaaaacactcttactcttgaatat
agaatcggaagcccgtccatcggaatcgaataccttgcaaaaattctaatggaatatctg
aaaacagaacctgtcttttttcctcgaaaagctttcctcaattactatctaaaaaatatc
caaggcgactccaaaaacaaaacactggacgacgtcttcgacgacgaaagcgcgtggatt
cgttttttgaaggaggaattaaacgaagtcaaaagcggattgtcctctttggttaaactc
tatcccaaaaccccaaacttgattttacaatcccgaatccaatgggctaaaaacttctat
aaaccttttttagattggaggaaggacgacctatga |