KEGG   Lentilactobacillus buchneri subsp. silagei CD034: LBUCD034_1964
Entry
LBUCD034_1964     CDS       T02244                                 
Symbol
csn1
Name
(GenBank) CRISPR-associated protein, Csn1 family
  KO
K09952  CRISPR-associated endonuclease Csn1 [EC:3.1.-.-]
Organism
lbn  Lentilactobacillus buchneri subsp. silagei CD034
Brite
KEGG Orthology (KO) [BR:lbn00001]
 09180 Brite Hierarchies
  09183 Protein families: signaling and cellular processes
   02048 Prokaryotic defense system [BR:lbn02048]
    LBUCD034_1964 (csn1)
Prokaryotic defense system [BR:lbn02048]
 CRISPR-Cas system
  Type II CRISPR-Cas system
   Type II signiture cas proteins
    LBUCD034_1964 (csn1)
SSDB
Motif
Pfam: Cas9_REC Cas9_PI HNH_4 Cas9-BH RuvC_III DUF4325
Other DBs
NCBI-ProteinID: AFS00953
UniProt: J9W3C2
LinkDB
Position
complement(1944958..1949073)
AA seq 1371 aa
MKVNNYHIGLDIGTSSIGWVAIGKDGKPLRVKGKTAIGARLFQEGNPAADRRMFRTTRRR
LSRRKWRLKLLEEIFDPYITPVDSTFFARLKQSNLSPKDSRKEFKGSMLFPDLTDMQYHK
NYPTIYHLRHALMTQDKKFDIRMVYLAIHHIVKYRGNFLNSTPVDSFKASKVDFVDQFKK
LNELYAAINPEESFKINLANSEDIGHQFLDPSIRKFDKKKQIPKIVPVMMNDKVTDRLNG
KIASEIIHAILGYKAKLDVVLQCTPVDSKPWALKFDDEDIDAKLEKILPEMDENQQSIVA
ILQNLYSQVTLNQIVPNGMSLSESMIEKYNDHHDHLKLYKKLIDQLADPKKKAVLKKAYS
QYVGDDGKVIEQAEFWSSVKKNLDDSELSKQIMDLIDAEKFMPKQRTSQNGVIPHQLHQR
ELDEIIEHQSKYYPWLVEINPNKHDLHLAKYKIEQLVAFRVPYYVGPMITPKDQAESAET
VFSWMERKGTETGQITPWNFDEKVDRKASANRFIKRMTTKDTYLIGEDVLPDESLLYEKF
KVLNELNMVRVNGKLLKVADKQAIFQDLFENYKHVSVKKLQNYIKAKTGLPSDPEISGLS
DPEHFNNSLGTYNDFKKLFGSKVDEPDLQDDFEKIVEWSTVFEDKKILREKLNEITWLSD
QQKDVLESSRYQGWGRLSKKLLTGIVNDQGERIIDKLWNTNKNFMQIQSDDDFAKRIHEA
NADQMQAVDVEDVLADAYTSPQNKKAIRQVVKVVDDIQKAMGGVAPKYISIEFTRSEDRN
PRRTISRQRQLENTLKDTAKSLAKSINPELLSELDNAAKSKKGLTDRLYLYFTQLGKDIY
TGEPINIDELNKYDIDHILPQAFIKDNSLDNRVLVLTAVNNGKSDNVPLRMFGAKMGHFW
KQLAEAGLISKRKLKNLQTDPDTISKYAMHGFIRRQLVETSQVIKLVANILGDKYRNDDT
KIIEITARMNHQMRDEFGFIKNREINDYHHAFDAYLTAFLGRYLYHRYIKLRPYFVYGDF
KKFREDKVTMRNFNFLHDLTDDTQEKIADAETGEVIWDRENSIQQLKDVYHYKFMLISHE
VYTLRGAMFNQTVYPASDAGKRKLIPVKADRPVNVYGGYSGSADAYMAIVRIHNKKGDKY
RVVGVPMRALDRLDAAKNVSDADFDRALKDVLAPQLTKTKKSRKTGEITQVIEDFEIVLG
KVMYRQLMIDGDKKFMLGSSTYQYNAKQLVLSDQSVKTLASKGRLDPLQESMDYNNVYTE
ILDKVNQYFSLYDMNKFRHKLNLGFSKFISFPNHNVLDGNTKVSSGKREILQEILNGLHA
NPTFGNLKDVGITTPFGQLQQPNGILLSDETKIRYQSPTGLFERTVSLKDL
NT seq 4116 nt   +upstreamnt  +downstreamnt
atgaaagttaataattatcatataggtctcgatattgggacctcatcaattggttgggtc
gcaattggcaaagacggaaaaccgctgcgtgttaaagggaagacagcgattggcgcccgg
ttgtttcaggaaggcaaccccgctgccgaccgcaggatgtttcgaaccactcgacggcgt
ctgagtcgacggaagtggcgattgaagttattggaggaaatatttgacccatatattaca
cctgtcgattccacgtttttcgccaggttgaaacaatccaatttgtcaccaaaagattca
cgcaaagaattcaagggttccatgcttttcccggatttgaccgacatgcagtaccacaaa
aattatccaaccatttatcatttacgtcatgcattaatgacgcaagataaaaaatttgat
attcggatggtttacttggccattcaccacattgtgaaatatcgcggcaatttcttaaac
tctacaccagtagattcctttaaggcatcgaaggttgattttgttgaccaatttaaaaag
ttaaacgagttatatgccgcaattaatcctgaagagtcatttaaaattaatcttgcaaat
agcgaagatattggccaccagttcctcgatccatcaattcgtaaatttgacaagaaaaag
caaattccaaagattgttcctgtcatgatgaatgataaagtaacggacagacttaatggt
aaaatcgcgtcagaaattattcatgctattttaggctataaagcaaaacttgatgttgtc
ctacagtgcaccccagttgattccaaaccatgggcacttaaattcgatgatgaggacatt
gatgccaaacttgaaaagattttacctgaaatggacgaaaatcaacaatcaattgttgct
atcctacagaacttatattctcaagtaactttgaatcaaattgttcctaatggcatgtca
ttatcagaatcaatgatcgaaaagtacaatgatcatcatgaccacttgaagttgtataaa
aagctaattgatcaactcgctgatccgaagaagaaagccgtcttaaagaaggcatatagt
caatacgtgggtgacgatggtaaagtcatcgaacaagccgagttctggtcaagcgtgaag
aaaaatttggatgattccgagctctcaaagcaaattatggatctgatcgatgcagaaaaa
tttatgccaaagcaacgaacatcgcaaaatggggtgattcctcatcaactgcaccaaaga
gaacttgatgaaatcattgaacatcaaagcaaatattacccatggcttgtcgagatcaat
cccaataagcacgatctccaccttgcaaaatacaagattgaacaattggttgcttttagg
gttccatattatgttgggccaatgataacgccaaaagaccaggctgaatcagcagagact
gttttttcttggatggagcgtaagggtacagaaactgggcagattaccccttggaatttt
gatgaaaaggttgaccggaaggcatccgcaaacagattcatcaagcgaatgaccaccaaa
gatacttatttaattggtgaggatgttcttccagatgaaagcttattatatgagaagttt
aaagtcctcaatgagttgaacatggtccgggttaacggcaaattattgaaggttgctgat
aaacaagcgatattccaagatcttttcgaaaactacaagcatgtctcggtcaagaagctg
caaaattacattaaagccaaaacaggattacccagtgatccggagatttcaggtttatca
gaccctgagcatttcaacaattctttgggaacatacaatgatttcaagaaattatttggt
agtaaggttgacgaaccagatcttcaagatgattttgagaagattgttgaatggtcaact
gtatttgaggacaaaaaaatcctgcgggaaaagcttaacgaaattacctggttatctgat
cagcaaaaagatgttttagaatccagtcgttaccaaggttggggccggctttccaagaaa
ctgttaactggaattgtcaatgaccaaggcgaacgaatcattgacaaactttggaatacc
aataaaaatttcatgcaaattcagtctgatgatgattttgccaaacggattcacgaagcg
aatgctgaccaaatgcaggcagtcgacgtggaagatgtgttggcagatgcgtacacttct
ccacaaaataagaaggccatccgccaagtggttaaagtcgttgatgatatccaaaaggcc
atgggcggagttgcgcctaagtatatttctattgagtttacccgttcagaggaccgtaat
ccacgtcggacaatttcacgacaacggcaacttgaaaataccttaaaagatactgctaaa
tctttggctaaatcaatcaatcccgagttactttctgaactggacaatgcagcaaagtct
aagaagggcctgactgatcggttgtacttgtacttcacgcaacttgggaaggatatctac
actggagagccaatcaacattgatgaacttaataaatatgacattgatcatattttgcca
caggcatttattaaagataattcactggataaccgtgtactagttttaacggcggttaac
aatggtaaatcggataacgttcctctaagaatgtttggtgccaagatggggcacttctgg
aaacagcttgctgaagcaggcttgattagtaagcgcaaactcaagaaccttcaaacagat
cccgataccattagtaagtatgcgatgcatggattcattcgtcgacagttggttgaaacc
agccaagttatcaaactggtcgcgaacattttgggagacaagtatcgcaatgatgatacc
aagattattgaaattactgcccggatgaaccatcagatgagagatgagtttgggtttatc
aagaatcgtgagatcaatgactatcatcatgcgtttgacgcctacttaacagccttttta
ggtagatatttgtaccatcgatacatcaagcttcgtccatacttcgtctatggtgatttc
aagaagtttagagaagataaagtcactatgcgaaattttaattttctccatgatttaact
gatgatactcaagaaaagatcgctgatgctgagactggtgaagtaatatgggaccgcgaa
aattcaattcagcagttaaaggatgtttaccattataaattcatgctgatttcacacgaa
gtttatacgcttcgcggcgcaatgttcaatcaaactgtttatcctgcatcagatgccggc
aaacgaaaattgattccggtaaaagctgatcgaccggtcaatgtctatggtggatatagc
ggcagtgcggatgcgtatatggcaattgtcagaattcataataagaagggcgataaatat
agggttgtcggtgttccaatgcgggcactggatcgtttagacgccgcgaaaaacgtcagt
gatgcggactttgaccgggctctcaaagatgtattggcaccacagctcacgaagactaag
aagagtcggaaaacgggagaaatcacccaagtcattgaagattttgagattgttttagga
aaagtaatgtaccgacaattgatgattgatggtgataagaagttcatgcttggaagctca
acctatcaatataacgccaagcaattggtcctctccgatcaatctgtcaagacacttgca
agcaaaggaagattagatcctctgcaagaaagtatggattacaataacgtctacactgag
attttagacaaggttaatcagtatttttctttatatgatatgaataaatttcgtcacaag
ttgaatcttggtttcagcaaatttatctcatttcctaaccataatgtccttgatgggaat
actaaggtgtcttctggcaaacgggagatcttgcaagaaatattgaatgggctacatgca
aatccaacattcgggaatttgaaggatgtcggcatcacaacgccatttggtcaattacaa
cagcctaatggaattctgctgtcagatgaaacaaagattcgttatcagtcaccaacaggc
ttattcgaaagaaccgtcagtctgaaggacttataa

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